EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040677 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 144045 bases
Position: chrAPWO02000259.1:88870-232914
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	1	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	2	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	3	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	4	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	5	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	6	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	7	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	8	9
ENSAMXP00000044999	zf-C2H2	PF00096.26	3.3e-53	9	9
ENSAMXP00000044999	zf-met	PF12874.7	1.1e-17	1	4
ENSAMXP00000044999	zf-met	PF12874.7	1.1e-17	2	4
ENSAMXP00000044999	zf-met	PF12874.7	1.1e-17	3	4
ENSAMXP00000044999	zf-met	PF12874.7	1.1e-17	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043030	-	1104	-	ENSAMXP00000044999	367 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040677's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040677	-	86	68.601	ENSAMXG00000024978	-	97	68.601
ENSAMXG00000040677	-	86	49.550	ENSAMXG00000007973	-	97	48.131
ENSAMXG00000040677	-	92	59.623	ENSAMXG00000036241	-	93	58.912
ENSAMXG00000040677	-	88	59.164	ENSAMXG00000037923	-	99	59.164
ENSAMXG00000040677	-	96	57.102	ENSAMXG00000031496	-	92	57.102
ENSAMXG00000040677	-	90	61.409	ENSAMXG00000026142	-	95	61.409
ENSAMXG00000040677	-	96	62.424	ENSAMXG00000035437	-	99	62.424
ENSAMXG00000040677	-	87	67.235	ENSAMXG00000041404	-	97	67.235
ENSAMXG00000040677	-	84	60.825	ENSAMXG00000037143	-	97	60.825
ENSAMXG00000040677	-	88	61.462	ENSAMXG00000039408	-	97	61.462
ENSAMXG00000040677	-	84	52.113	ENSAMXG00000035286	si:ch1073-224n8.1	87	44.175
ENSAMXG00000040677	-	84	66.556	ENSAMXG00000032457	-	91	66.556
ENSAMXG00000040677	-	84	68.493	ENSAMXG00000032619	-	97	68.493
ENSAMXG00000040677	-	96	49.801	ENSAMXG00000035127	-	89	49.801
ENSAMXG00000040677	-	96	66.129	ENSAMXG00000037885	-	96	66.129
ENSAMXG00000040677	-	90	53.846	ENSAMXG00000043541	-	90	56.250
ENSAMXG00000040677	-	81	42.568	ENSAMXG00000034934	-	79	42.568
ENSAMXG00000040677	-	88	38.397	ENSAMXG00000033299	-	73	40.000
ENSAMXG00000040677	-	91	68.468	ENSAMXG00000017609	-	83	68.468
ENSAMXG00000040677	-	96	67.606	ENSAMXG00000025455	-	99	67.606
ENSAMXG00000040677	-	96	62.058	ENSAMXG00000039004	-	89	62.058
ENSAMXG00000040677	-	90	65.875	ENSAMXG00000034847	-	91	65.875
ENSAMXG00000040677	-	97	62.069	ENSAMXG00000037760	-	100	60.518
ENSAMXG00000040677	-	90	54.839	ENSAMXG00000026144	-	99	54.839
ENSAMXG00000040677	-	85	53.079	ENSAMXG00000026143	-	99	56.291
ENSAMXG00000040677	-	88	64.242	ENSAMXG00000041609	-	99	64.242
ENSAMXG00000040677	-	83	47.436	ENSAMXG00000033001	-	62	47.436
ENSAMXG00000040677	-	91	63.863	ENSAMXG00000036567	-	85	63.863
ENSAMXG00000040677	-	87	45.714	ENSAMXG00000037382	-	74	38.750
ENSAMXG00000040677	-	84	42.045	ENSAMXG00000034873	-	81	42.045
ENSAMXG00000040677	-	84	60.816	ENSAMXG00000030530	-	98	64.378
ENSAMXG00000040677	-	84	38.150	ENSAMXG00000032845	-	56	38.150
ENSAMXG00000040677	-	88	61.842	ENSAMXG00000032841	-	85	61.842
ENSAMXG00000040677	-	88	64.430	ENSAMXG00000036233	-	84	67.123
ENSAMXG00000040677	-	98	62.215	ENSAMXG00000040630	-	98	62.215
ENSAMXG00000040677	-	97	59.483	ENSAMXG00000035875	-	99	64.327
ENSAMXG00000040677	-	91	64.557	ENSAMXG00000009558	-	93	65.865
ENSAMXG00000040677	-	86	36.567	ENSAMXG00000042624	SCRT1	58	36.567
ENSAMXG00000040677	-	96	47.826	ENSAMXG00000013492	-	96	48.239
ENSAMXG00000040677	-	96	59.551	ENSAMXG00000010930	-	79	59.551
ENSAMXG00000040677	-	83	41.379	ENSAMXG00000035246	-	67	41.379
ENSAMXG00000040677	-	91	64.983	ENSAMXG00000039016	-	86	64.983
ENSAMXG00000040677	-	87	67.742	ENSAMXG00000039879	-	97	67.742
ENSAMXG00000040677	-	89	58.219	ENSAMXG00000042746	-	86	58.219
ENSAMXG00000040677	-	90	51.309	ENSAMXG00000043178	-	72	51.309
ENSAMXG00000040677	-	80	54.430	ENSAMXG00000038122	-	93	54.430
ENSAMXG00000040677	-	90	64.793	ENSAMXG00000040212	-	93	64.793
ENSAMXG00000040677	-	87	58.521	ENSAMXG00000017959	-	98	58.521
ENSAMXG00000040677	-	92	60.825	ENSAMXG00000010078	-	91	60.825
ENSAMXG00000040677	-	90	44.545	ENSAMXG00000015228	-	85	44.545
ENSAMXG00000040677	-	86	57.878	ENSAMXG00000010805	-	98	57.878
ENSAMXG00000040677	-	92	58.989	ENSAMXG00000040806	-	94	58.989
ENSAMXG00000040677	-	96	66.894	ENSAMXG00000025965	-	91	66.894
ENSAMXG00000040677	-	84	48.168	ENSAMXG00000029518	-	52	74.194
ENSAMXG00000040677	-	97	62.258	ENSAMXG00000033201	-	96	62.258
ENSAMXG00000040677	-	86	61.168	ENSAMXG00000044028	-	95	61.168
ENSAMXG00000040677	-	91	61.597	ENSAMXG00000042275	-	98	61.597
ENSAMXG00000040677	-	97	65.916	ENSAMXG00000007092	-	98	65.916
ENSAMXG00000040677	-	84	42.169	ENSAMXG00000039600	gfi1ab	50	42.169
ENSAMXG00000040677	-	96	59.091	ENSAMXG00000034402	-	95	59.091
ENSAMXG00000040677	-	97	58.280	ENSAMXG00000043978	-	97	58.280
ENSAMXG00000040677	-	97	62.609	ENSAMXG00000039700	-	98	62.609
ENSAMXG00000040677	-	89	69.369	ENSAMXG00000041861	-	94	66.102
ENSAMXG00000040677	-	96	64.505	ENSAMXG00000041865	-	97	64.505
ENSAMXG00000040677	-	85	55.897	ENSAMXG00000019489	-	85	57.500
ENSAMXG00000040677	-	84	62.185	ENSAMXG00000043291	-	78	62.185
ENSAMXG00000040677	-	86	43.038	ENSAMXG00000041862	-	99	43.038
ENSAMXG00000040677	-	97	58.333	ENSAMXG00000039770	-	90	58.333
ENSAMXG00000040677	-	85	58.564	ENSAMXG00000029161	-	81	58.564
ENSAMXG00000040677	-	84	68.000	ENSAMXG00000031900	-	94	68.000
ENSAMXG00000040677	-	98	65.500	ENSAMXG00000035683	-	97	65.500
ENSAMXG00000040677	-	97	54.027	ENSAMXG00000042174	-	92	54.027
ENSAMXG00000040677	-	95	62.838	ENSAMXG00000042938	-	92	57.471
ENSAMXG00000040677	-	84	67.401	ENSAMXG00000031646	-	94	68.156
ENSAMXG00000040677	-	84	56.481	ENSAMXG00000039881	-	77	56.481
ENSAMXG00000040677	-	86	62.799	ENSAMXG00000039182	-	75	62.799
ENSAMXG00000040677	-	96	66.436	ENSAMXG00000041975	-	90	66.436
ENSAMXG00000040677	-	92	61.301	ENSAMXG00000036915	-	98	61.301
ENSAMXG00000040677	-	83	38.732	ENSAMXG00000044034	-	74	31.613
ENSAMXG00000040677	-	80	36.111	ENSAMXG00000039849	snai1b	74	32.500
ENSAMXG00000040677	-	98	63.240	ENSAMXG00000001626	-	98	63.240
ENSAMXG00000040677	-	80	43.396	ENSAMXG00000035090	-	53	43.396
ENSAMXG00000040677	-	97	37.500	ENSAMXG00000035525	znf646	78	37.500
ENSAMXG00000040677	-	96	54.138	ENSAMXG00000029783	-	97	54.138
ENSAMXG00000040677	-	84	38.028	ENSAMXG00000016921	znf341	65	38.028
ENSAMXG00000040677	-	96	65.315	ENSAMXG00000008613	-	98	65.315
ENSAMXG00000040677	-	96	55.287	ENSAMXG00000009563	-	98	57.188
ENSAMXG00000040677	-	82	38.346	ENSAMXG00000038235	snai2	53	38.346
ENSAMXG00000040677	-	88	65.568	ENSAMXG00000030911	-	65	65.568
ENSAMXG00000040677	-	86	62.411	ENSAMXG00000037326	-	92	61.244
ENSAMXG00000040677	-	96	35.816	ENSAMXG00000039622	zbtb41	51	33.333
ENSAMXG00000040677	-	87	67.391	ENSAMXG00000004610	-	97	67.391
ENSAMXG00000040677	-	84	38.028	ENSAMXG00000024907	znf319b	88	38.028
ENSAMXG00000040677	-	99	55.140	ENSAMXG00000038284	-	95	55.814
ENSAMXG00000040677	-	96	56.329	ENSAMXG00000038280	-	90	56.329
ENSAMXG00000040677	-	98	50.201	ENSAMXG00000035349	-	51	50.201
ENSAMXG00000040677	-	92	63.514	ENSAMXG00000043423	-	83	62.703
ENSAMXG00000040677	-	96	71.515	ENSAMXG00000029878	-	92	71.515
ENSAMXG00000040677	-	86	42.593	ENSAMXG00000042191	zbtb47a	69	42.593
ENSAMXG00000040677	-	90	65.607	ENSAMXG00000039977	-	97	65.607
ENSAMXG00000040677	-	84	66.212	ENSAMXG00000041725	-	91	66.212
ENSAMXG00000040677	-	97	67.196	ENSAMXG00000041721	-	88	61.215
ENSAMXG00000040677	-	88	65.529	ENSAMXG00000039432	-	99	65.529
ENSAMXG00000040677	-	96	66.553	ENSAMXG00000043251	-	95	66.553
ENSAMXG00000040677	-	90	60.140	ENSAMXG00000033124	-	72	60.140
ENSAMXG00000040677	-	90	64.545	ENSAMXG00000034958	-	95	64.545
ENSAMXG00000040677	-	86	44.253	ENSAMXG00000044096	-	80	44.253
ENSAMXG00000040677	-	84	66.029	ENSAMXG00000035145	-	63	65.196
ENSAMXG00000040677	-	96	62.771	ENSAMXG00000009776	-	96	62.771
ENSAMXG00000040677	-	93	35.606	ENSAMXG00000038085	scrt1a	63	35.606
ENSAMXG00000040677	-	96	67.918	ENSAMXG00000036762	-	96	67.918
ENSAMXG00000040677	-	89	56.233	ENSAMXG00000042633	-	99	58.824
ENSAMXG00000040677	-	89	58.654	ENSAMXG00000032237	-	98	58.654
ENSAMXG00000040677	-	96	66.553	ENSAMXG00000039162	-	95	66.553
ENSAMXG00000040677	-	96	63.211	ENSAMXG00000041128	-	90	63.211
ENSAMXG00000040677	-	85	56.000	ENSAMXG00000034344	-	74	55.947
ENSAMXG00000040677	-	89	64.516	ENSAMXG00000035690	-	75	64.840
ENSAMXG00000040677	-	87	69.106	ENSAMXG00000042167	-	99	69.106
ENSAMXG00000040677	-	95	52.747	ENSAMXG00000034096	-	91	51.163
ENSAMXG00000040677	-	87	53.846	ENSAMXG00000012604	-	97	53.846
ENSAMXG00000040677	-	83	35.606	ENSAMXG00000034158	scrt2	55	35.606
ENSAMXG00000040677	-	84	71.111	ENSAMXG00000035809	-	99	71.111
ENSAMXG00000040677	-	88	58.159	ENSAMXG00000044107	-	88	54.321
ENSAMXG00000040677	-	84	67.905	ENSAMXG00000018161	-	95	67.905
ENSAMXG00000040677	-	83	40.230	ENSAMXG00000007441	-	58	43.103
ENSAMXG00000040677	-	93	61.600	ENSAMXG00000038324	-	85	58.934
ENSAMXG00000040677	-	99	59.887	ENSAMXG00000043019	-	95	59.887
ENSAMXG00000040677	-	87	63.542	ENSAMXG00000041650	-	87	63.542
ENSAMXG00000040677	-	86	39.231	ENSAMXG00000029059	-	72	38.532
ENSAMXG00000040677	-	84	62.963	ENSAMXG00000033013	-	81	62.963
ENSAMXG00000040677	-	94	49.359	ENSAMXG00000034333	-	84	51.546
ENSAMXG00000040677	-	89	59.247	ENSAMXG00000038536	-	86	59.247
ENSAMXG00000040677	-	81	62.857	ENSAMXG00000036849	-	78	62.857
ENSAMXG00000040677	-	92	54.054	ENSAMXG00000038905	-	98	54.054
ENSAMXG00000040677	-	96	67.347	ENSAMXG00000031009	-	81	67.347
ENSAMXG00000040677	-	88	61.000	ENSAMXG00000044110	-	90	61.000
ENSAMXG00000040677	-	95	41.786	ENSAMXG00000014745	-	82	49.133
ENSAMXG00000040677	-	89	62.462	ENSAMXG00000031844	-	98	62.462
ENSAMXG00000040677	-	97	61.538	ENSAMXG00000029828	-	97	61.538
ENSAMXG00000040677	-	91	63.603	ENSAMXG00000035949	-	85	59.539
ENSAMXG00000040677	-	91	41.209	ENSAMXG00000006669	GFI1	68	41.209
ENSAMXG00000040677	-	97	61.887	ENSAMXG00000030742	-	99	61.887
ENSAMXG00000040677	-	89	54.985	ENSAMXG00000038325	-	99	54.985
ENSAMXG00000040677	-	86	61.130	ENSAMXG00000039752	-	89	61.130
ENSAMXG00000040677	-	97	60.076	ENSAMXG00000029109	-	88	60.076
ENSAMXG00000040677	-	89	59.468	ENSAMXG00000037717	-	97	59.468
ENSAMXG00000040677	-	89	35.673	ENSAMXG00000025761	-	89	36.593
ENSAMXG00000040677	-	83	68.151	ENSAMXG00000038636	-	98	68.151
ENSAMXG00000040677	-	96	44.079	ENSAMXG00000033252	-	97	43.200
ENSAMXG00000040677	-	86	61.024	ENSAMXG00000036633	-	69	55.202
ENSAMXG00000040677	-	96	67.235	ENSAMXG00000031501	-	89	67.235
ENSAMXG00000040677	-	84	64.706	ENSAMXG00000000353	-	93	64.706
ENSAMXG00000040677	-	86	38.511	ENSAMXG00000041864	prdm5	83	38.387
ENSAMXG00000040677	-	87	66.154	ENSAMXG00000025452	-	99	66.667
ENSAMXG00000040677	-	96	66.827	ENSAMXG00000029178	-	97	66.774
ENSAMXG00000040677	-	97	67.138	ENSAMXG00000038453	-	84	67.138
ENSAMXG00000040677	-	81	58.182	ENSAMXG00000030963	-	64	58.182
ENSAMXG00000040677	-	86	46.926	ENSAMXG00000012589	-	80	46.926
ENSAMXG00000040677	-	89	67.667	ENSAMXG00000011804	-	87	67.667
ENSAMXG00000040677	-	89	65.052	ENSAMXG00000031794	-	99	65.052
ENSAMXG00000040677	-	87	57.083	ENSAMXG00000012873	-	97	56.250
ENSAMXG00000040677	-	97	67.265	ENSAMXG00000035920	-	91	67.265
ENSAMXG00000040677	-	84	55.752	ENSAMXG00000043302	-	72	54.425
ENSAMXG00000040677	-	85	55.056	ENSAMXG00000032212	-	90	55.108
ENSAMXG00000040677	-	84	67.097	ENSAMXG00000042774	-	94	67.097
ENSAMXG00000040677	-	87	60.956	ENSAMXG00000037981	-	76	60.956
ENSAMXG00000040677	-	90	50.943	ENSAMXG00000034857	-	68	50.943
ENSAMXG00000040677	-	87	56.140	ENSAMXG00000042784	-	94	56.140
ENSAMXG00000040677	-	90	42.478	ENSAMXG00000017199	-	50	39.053
ENSAMXG00000040677	-	87	55.556	ENSAMXG00000036257	-	94	55.556
ENSAMXG00000040677	-	90	60.317	ENSAMXG00000013274	-	100	60.317
ENSAMXG00000040677	-	96	56.250	ENSAMXG00000030659	-	86	56.250
ENSAMXG00000040677	-	90	61.628	ENSAMXG00000031307	-	69	61.628
ENSAMXG00000040677	-	96	58.631	ENSAMXG00000033500	-	92	58.631
ENSAMXG00000040677	-	86	61.538	ENSAMXG00000031489	-	96	61.538
ENSAMXG00000040677	-	86	62.500	ENSAMXG00000003002	-	94	58.824
ENSAMXG00000040677	-	84	67.857	ENSAMXG00000039744	-	99	67.857
ENSAMXG00000040677	-	84	70.175	ENSAMXG00000037703	-	81	70.175
ENSAMXG00000040677	-	94	59.921	ENSAMXG00000037709	-	95	59.921
ENSAMXG00000040677	-	94	60.738	ENSAMXG00000042593	-	98	60.738
ENSAMXG00000040677	-	97	58.567	ENSAMXG00000029960	-	97	58.567

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040677	-	86	54.598	ENSAOCG00000013672	-	94	54.545	Amphiprion_ocellaris
ENSAMXG00000040677	-	93	49.237	ENSACLG00000008821	-	99	48.374	Astatotilapia_calliptera
ENSAMXG00000040677	-	90	53.000	ENSTSYG00000006246	-	78	53.000	Carlito_syrichta
ENSAMXG00000040677	-	76	50.658	ENSCGRG00001019143	-	82	50.658	Cricetulus_griseus_chok1gshd
ENSAMXG00000040677	-	87	50.196	ENSCGRG00001024303	-	98	50.196	Cricetulus_griseus_chok1gshd
ENSAMXG00000040677	-	87	50.000	ENSCGRG00001012803	-	77	50.000	Cricetulus_griseus_chok1gshd
ENSAMXG00000040677	-	87	50.719	ENSCGRG00000008531	-	91	50.719	Cricetulus_griseus_crigri
ENSAMXG00000040677	-	87	50.000	ENSCGRG00000009742	-	77	50.000	Cricetulus_griseus_crigri
ENSAMXG00000040677	-	84	49.573	ENSEBUG00000001121	-	80	47.742	Eptatretus_burgeri
ENSAMXG00000040677	-	96	43.310	ENSEBUG00000015993	-	60	43.310	Eptatretus_burgeri
ENSAMXG00000040677	-	84	44.928	ENSEBUG00000003236	-	93	44.762	Eptatretus_burgeri
ENSAMXG00000040677	-	96	46.462	ENSEBUG00000003590	-	72	47.475	Eptatretus_burgeri
ENSAMXG00000040677	-	96	45.000	ENSEBUG00000007375	-	83	46.129	Eptatretus_burgeri
ENSAMXG00000040677	-	95	43.860	ENSEBUG00000015834	-	92	43.860	Eptatretus_burgeri
ENSAMXG00000040677	-	96	51.178	ENSEBUG00000017017	-	63	51.178	Eptatretus_burgeri
ENSAMXG00000040677	-	85	52.349	ENSIPUG00000013315	-	94	52.349	Ictalurus_punctatus
ENSAMXG00000040677	-	88	47.348	ENSMAUG00000016437	-	96	48.029	Mesocricetus_auratus
ENSAMXG00000040677	-	84	48.649	ENSMAUG00000005691	-	74	48.430	Mesocricetus_auratus
ENSAMXG00000040677	-	86	49.738	ENSMOCG00000000365	-	77	49.738	Microtus_ochrogaster
ENSAMXG00000040677	-	84	55.973	MGP_CAROLIEiJ_G0018683	Zfp493	82	55.973	Mus_caroli
ENSAMXG00000040677	-	84	47.755	MGP_CAROLIEiJ_G0018660	-	66	47.755	Mus_caroli
ENSAMXG00000040677	-	84	56.357	ENSMUSG00000091474	2610021A01Rik	65	56.357	Mus_musculus
ENSAMXG00000040677	-	84	47.292	ENSMUSG00000074824	Rslcan18	70	47.292	Mus_musculus
ENSAMXG00000040677	-	84	57.576	MGP_PahariEiJ_G0012839	-	63	56.129	Mus_pahari
ENSAMXG00000040677	-	84	48.163	MGP_SPRETEiJ_G0019543	-	68	48.163	Mus_spretus
ENSAMXG00000040677	-	94	40.724	ENSPMAG00000000404	-	99	40.724	Petromyzon_marinus
ENSAMXG00000040677	-	86	62.414	ENSPNAG00000003017	-	93	62.414	Pygocentrus_nattereri
ENSAMXG00000040677	-	90	59.885	ENSPNAG00000014492	-	100	59.885	Pygocentrus_nattereri
ENSAMXG00000040677	-	87	57.310	ENSSSCG00000040389	-	84	54.967	Sus_scrofa
ENSAMXG00000040677	-	96	42.857	ENSTRUG00000014476	-	86	42.857	Takifugu_rubripes