EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000040738 (Gene tree)
Gene ID: 103046705
Gene Symbol: ddx20
Alias: fb59a11|si:dkey-193l3.3|si:dkey-193l3.4|wu:fb16g08|wu:fb59a11
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 21295 bases
Position: chr6:14525437-14546731
Accession: 103046705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029161	ResIII	PF04851.15	7.5e-06	1	1
ENSAMXP00000032185	ResIII	PF04851.15	7.5e-06	1	1
ENSAMXP00000029161	DEAD	PF00270.29	2.9e-32	1	1
ENSAMXP00000032185	DEAD	PF00270.29	2.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042200	-	6350	XM_022670263	ENSAMXP00000032185	873 (aa)	XP_022525984	UPI000BBDB762
ENSAMXT00000042225	-	6572	-	ENSAMXP00000029161	873 (aa)	-	UPI000BBDB762

Gene Model

Click here to download ENSAMXG00000040738's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040738's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040738	ddx20	77	60.840	ENSG00000064703	DDX20	60	79.518	Homo_sapiens
ENSAMXG00000040738	ddx20	75	73.010	ENSAPOG00000017383	DDX20	69	73.137	Acanthochromis_polyacanthus
ENSAMXG00000040738	ddx20	75	61.938	ENSAMEG00000005344	DDX20	70	61.938	Ailuropoda_melanoleuca
ENSAMXG00000040738	ddx20	80	69.717	ENSACIG00000013095	ddx20	79	69.717	Amphilophus_citrinellus
ENSAMXG00000040738	ddx20	76	71.821	ENSAOCG00000013474	DDX20	76	67.722	Amphiprion_ocellaris
ENSAMXG00000040738	ddx20	71	71.821	ENSAPEG00000006690	ddx20	75	67.722	Amphiprion_percula
ENSAMXG00000040738	ddx20	74	70.627	ENSATEG00000002941	ddx20	78	70.627	Anabas_testudineus
ENSAMXG00000040738	ddx20	72	49.630	ENSAPLG00000013826	DDX20	74	49.630	Anas_platyrhynchos
ENSAMXG00000040738	ddx20	69	61.847	ENSACAG00000006235	DDX20	75	61.847	Anolis_carolinensis
ENSAMXG00000040738	ddx20	78	60.906	ENSANAG00000037881	DDX20	73	60.566	Aotus_nancymaae
ENSAMXG00000040738	ddx20	76	69.421	ENSACLG00000009485	ddx20	78	69.421	Astatotilapia_calliptera
ENSAMXG00000040738	ddx20	72	60.891	ENSBTAG00000018717	DDX20	72	61.221	Bos_taurus
ENSAMXG00000040738	ddx20	87	56.509	ENSCJAG00000013428	DDX20	72	59.319	Callithrix_jacchus
ENSAMXG00000040738	ddx20	71	61.938	ENSCAFG00000013674	DDX20	70	61.938	Canis_familiaris
ENSAMXG00000040738	ddx20	75	61.765	ENSCAFG00020008055	DDX20	91	75.578	Canis_lupus_dingo
ENSAMXG00000040738	ddx20	72	61.269	ENSCHIG00000011219	DDX20	72	61.056	Capra_hircus
ENSAMXG00000040738	ddx20	75	61.538	ENSTSYG00000000153	DDX20	71	61.538	Carlito_syrichta
ENSAMXG00000040738	ddx20	72	59.370	ENSCPOG00000032340	DDX20	73	59.370	Cavia_porcellus
ENSAMXG00000040738	ddx20	69	62.742	ENSCCAG00000026759	DDX20	69	62.742	Cebus_capucinus
ENSAMXG00000040738	ddx20	78	60.132	ENSCATG00000039030	DDX20	73	59.804	Cercocebus_atys
ENSAMXG00000040738	ddx20	72	59.635	ENSCLAG00000008874	DDX20	73	59.635	Chinchilla_lanigera
ENSAMXG00000040738	ddx20	78	60.535	ENSCSAG00000001582	DDX20	73	60.199	Chlorocebus_sabaeus
ENSAMXG00000040738	ddx20	78	62.931	ENSCPBG00000021256	DDX20	74	62.121	Chrysemys_picta_bellii
ENSAMXG00000040738	ddx20	78	60.132	ENSCANG00000041894	DDX20	73	59.804	Colobus_angolensis_palliatus
ENSAMXG00000040738	ddx20	80	59.638	ENSCGRG00001014132	Ddx20	77	58.452	Cricetulus_griseus_chok1gshd
ENSAMXG00000040738	ddx20	72	56.932	ENSCGRG00000002300	Ddx20	75	57.353	Cricetulus_griseus_crigri
ENSAMXG00000040738	ddx20	89	50.630	ENSCSEG00000018265	DDX20	59	65.385	Cynoglossus_semilaevis
ENSAMXG00000040738	ddx20	70	70.660	ENSCVAG00000014821	ddx20	72	70.979	Cyprinodon_variegatus
ENSAMXG00000040738	ddx20	74	68.543	ENSDARG00000061204	ddx20	75	68.852	Danio_rerio
ENSAMXG00000040738	ddx20	70	60.847	ENSDNOG00000030865	DDX20	70	62.087	Dasypus_novemcinctus
ENSAMXG00000040738	ddx20	78	60.862	ENSDORG00000011660	Ddx20	73	60.862	Dipodomys_ordii
ENSAMXG00000040738	ddx20	77	61.313	ENSEASG00005005454	DDX20	70	61.313	Equus_asinus_asinus
ENSAMXG00000040738	ddx20	77	61.246	ENSECAG00000013565	DDX20	70	61.246	Equus_caballus
ENSAMXG00000040738	ddx20	82	65.142	ENSELUG00000010260	ddx20	73	68.235	Esox_lucius
ENSAMXG00000040738	ddx20	81	61.765	ENSFCAG00000025736	DDX20	70	61.765	Felis_catus
ENSAMXG00000040738	ddx20	71	54.186	ENSFALG00000000666	DDX20	75	60.566	Ficedula_albicollis
ENSAMXG00000040738	ddx20	69	60.993	ENSFDAG00000001140	DDX20	66	60.993	Fukomys_damarensis
ENSAMXG00000040738	ddx20	75	70.517	ENSFHEG00000019742	ddx20	74	70.517	Fundulus_heteroclitus
ENSAMXG00000040738	ddx20	85	54.609	ENSGALG00000001504	DDX20	81	58.842	Gallus_gallus
ENSAMXG00000040738	ddx20	73	69.295	ENSGAFG00000006427	ddx20	76	69.295	Gambusia_affinis
ENSAMXG00000040738	ddx20	70	61.962	ENSGAGG00000000130	DDX20	74	61.565	Gopherus_agassizii
ENSAMXG00000040738	ddx20	74	62.456	ENSGGOG00000015576	DDX20	73	60.167	Gorilla_gorilla
ENSAMXG00000040738	ddx20	75	71.233	ENSHBUG00000007853	ddx20	76	71.233	Haplochromis_burtoni
ENSAMXG00000040738	ddx20	71	60.441	ENSHGLG00000014848	DDX20	71	60.441	Heterocephalus_glaber_female
ENSAMXG00000040738	ddx20	71	60.441	ENSHGLG00100003740	DDX20	71	60.441	Heterocephalus_glaber_male
ENSAMXG00000040738	ddx20	76	69.759	ENSHCOG00000001915	ddx20	74	69.759	Hippocampus_comes
ENSAMXG00000040738	ddx20	75	62.803	ENSSTOG00000029089	DDX20	70	62.803	Ictidomys_tridecemlineatus
ENSAMXG00000040738	ddx20	72	61.462	ENSJJAG00000011198	Ddx20	71	62.057	Jaculus_jaculus
ENSAMXG00000040738	ddx20	73	70.242	ENSKMAG00000019022	ddx20	84	67.857	Kryptolebias_marmoratus
ENSAMXG00000040738	ddx20	79	65.895	ENSLBEG00000019194	ddx20	79	69.449	Labrus_bergylta
ENSAMXG00000040738	ddx20	72	60.092	ENSLACG00000018491	DDX20	73	64.177	Latimeria_chalumnae
ENSAMXG00000040738	ddx20	70	68.166	ENSLOCG00000010372	ddx20	72	68.166	Lepisosteus_oculatus
ENSAMXG00000040738	ddx20	76	60.477	ENSLAFG00000014646	DDX20	73	60.477	Loxodonta_africana
ENSAMXG00000040738	ddx20	78	60.132	ENSMFAG00000031755	DDX20	73	59.804	Macaca_fascicularis
ENSAMXG00000040738	ddx20	78	60.132	ENSMNEG00000005757	DDX20	73	59.804	Macaca_nemestrina
ENSAMXG00000040738	ddx20	78	60.066	ENSMLEG00000005722	DDX20	73	59.738	Mandrillus_leucophaeus
ENSAMXG00000040738	ddx20	78	66.511	ENSMAMG00000009654	ddx20	80	68.379	Mastacembelus_armatus
ENSAMXG00000040738	ddx20	76	69.243	ENSMZEG00005027081	ddx20	79	69.243	Maylandia_zebra
ENSAMXG00000040738	ddx20	67	63.129	ENSMGAG00000004624	DDX20	81	59.672	Meleagris_gallopavo
ENSAMXG00000040738	ddx20	80	60.927	ENSMAUG00000010659	Ddx20	77	58.556	Mesocricetus_auratus
ENSAMXG00000040738	ddx20	70	62.306	ENSMICG00000011509	DDX20	70	62.306	Microcebus_murinus
ENSAMXG00000040738	ddx20	78	59.934	ENSMOCG00000012954	Ddx20	74	59.772	Microtus_ochrogaster
ENSAMXG00000040738	ddx20	71	71.278	ENSMMOG00000013103	ddx20	73	71.254	Mola_mola
ENSAMXG00000040738	ddx20	77	57.839	ENSMODG00000001311	DDX20	75	59.874	Monodelphis_domestica
ENSAMXG00000040738	ddx20	66	71.354	ENSMALG00000010740	ddx20	68	71.354	Monopterus_albus
ENSAMXG00000040738	ddx20	81	60.099	MGP_CAROLIEiJ_G0025474	Ddx20	77	58.399	Mus_caroli
ENSAMXG00000040738	ddx20	81	60.328	ENSMUSG00000027905	Ddx20	77	58.610	Mus_musculus
ENSAMXG00000040738	ddx20	81	59.508	MGP_PahariEiJ_G0026919	Ddx20	73	59.187	Mus_pahari
ENSAMXG00000040738	ddx20	81	60.065	MGP_SPRETEiJ_G0026423	Ddx20	77	58.385	Mus_spretus
ENSAMXG00000040738	ddx20	70	61.938	ENSMPUG00000004921	DDX20	70	61.938	Mustela_putorius_furo
ENSAMXG00000040738	ddx20	66	57.708	ENSMLUG00000009676	DDX20	73	57.708	Myotis_lucifugus
ENSAMXG00000040738	ddx20	79	59.571	ENSNGAG00000022953	Ddx20	77	58.188	Nannospalax_galili
ENSAMXG00000040738	ddx20	99	54.977	ENSNBRG00000020244	ddx20	74	69.371	Neolamprologus_brichardi
ENSAMXG00000040738	ddx20	69	62.982	ENSNLEG00000004040	DDX20	69	62.982	Nomascus_leucogenys
ENSAMXG00000040738	ddx20	75	69.130	ENSONIG00000012436	ddx20	84	68.637	Oreochromis_niloticus
ENSAMXG00000040738	ddx20	58	63.188	ENSOANG00000003318	DDX20	81	63.862	Ornithorhynchus_anatinus
ENSAMXG00000040738	ddx20	74	62.630	ENSOCUG00000025939	DDX20	70	62.630	Oryctolagus_cuniculus
ENSAMXG00000040738	ddx20	79	68.801	ENSORLG00000008949	ddx20	79	68.116	Oryzias_latipes
ENSAMXG00000040738	ddx20	86	64.339	ENSORLG00020003852	ddx20	79	67.955	Oryzias_latipes_hni
ENSAMXG00000040738	ddx20	86	64.444	ENSORLG00015020167	ddx20	79	67.794	Oryzias_latipes_hsok
ENSAMXG00000040738	ddx20	78	69.256	ENSOMEG00000013657	ddx20	86	68.000	Oryzias_melastigma
ENSAMXG00000040738	ddx20	71	61.577	ENSOGAG00000010503	DDX20	71	61.577	Otolemur_garnettii
ENSAMXG00000040738	ddx20	72	61.065	ENSOARG00000019651	DDX20	72	60.855	Ovis_aries
ENSAMXG00000040738	ddx20	77	60.840	ENSPPAG00000031680	DDX20	73	60.500	Pan_paniscus
ENSAMXG00000040738	ddx20	81	61.698	ENSPPRG00000022979	DDX20	70	61.831	Panthera_pardus
ENSAMXG00000040738	ddx20	77	60.672	ENSPTRG00000001105	DDX20	73	60.333	Pan_troglodytes
ENSAMXG00000040738	ddx20	78	60.132	ENSPANG00000017985	DDX20	73	59.804	Papio_anubis
ENSAMXG00000040738	ddx20	70	66.239	ENSPKIG00000020161	ddx20	72	66.239	Paramormyrops_kingsleyae
ENSAMXG00000040738	ddx20	64	62.595	ENSPSIG00000003636	DDX20	72	62.595	Pelodiscus_sinensis
ENSAMXG00000040738	ddx20	73	71.141	ENSPMGG00000005966	ddx20	75	71.141	Periophthalmus_magnuspinnatus
ENSAMXG00000040738	ddx20	74	62.759	ENSPEMG00000019595	Ddx20	70	62.759	Peromyscus_maniculatus_bairdii
ENSAMXG00000040738	ddx20	70	63.212	ENSPCIG00000027721	DDX20	70	63.558	Phascolarctos_cinereus
ENSAMXG00000040738	ddx20	73	68.333	ENSPFOG00000010540	ddx20	86	66.720	Poecilia_formosa
ENSAMXG00000040738	ddx20	73	68.227	ENSPLAG00000009925	ddx20	86	66.613	Poecilia_latipinna
ENSAMXG00000040738	ddx20	73	68.781	ENSPMEG00000005998	ddx20	86	66.132	Poecilia_mexicana
ENSAMXG00000040738	ddx20	73	68.395	ENSPREG00000018837	ddx20	86	66.453	Poecilia_reticulata
ENSAMXG00000040738	ddx20	77	60.840	ENSPPYG00000001026	DDX20	73	60.500	Pongo_abelii
ENSAMXG00000040738	ddx20	70	62.651	ENSPCOG00000025185	DDX20	70	62.651	Propithecus_coquereli
ENSAMXG00000040738	ddx20	77	61.034	ENSPVAG00000004664	DDX20	70	61.034	Pteropus_vampyrus
ENSAMXG00000040738	ddx20	76	69.421	ENSPNYG00000014433	ddx20	78	69.421	Pundamilia_nyererei
ENSAMXG00000040738	ddx20	78	62.051	ENSRNOG00000015274	Ddx20	70	62.906	Rattus_norvegicus
ENSAMXG00000040738	ddx20	78	60.535	ENSRBIG00000030629	DDX20	73	60.199	Rhinopithecus_bieti
ENSAMXG00000040738	ddx20	78	60.535	ENSRROG00000030608	DDX20	73	60.199	Rhinopithecus_roxellana
ENSAMXG00000040738	ddx20	77	61.008	ENSSBOG00000024789	DDX20	73	60.667	Saimiri_boliviensis_boliviensis
ENSAMXG00000040738	ddx20	60	60.887	ENSSHAG00000014518	DDX20	77	57.356	Sarcophilus_harrisii
ENSAMXG00000040738	ddx20	75	69.151	ENSSFOG00015008354	ddx20	78	69.151	Scleropages_formosus
ENSAMXG00000040738	ddx20	71	71.528	ENSSMAG00000007498	ddx20	68	71.231	Scophthalmus_maximus
ENSAMXG00000040738	ddx20	73	69.799	ENSSDUG00000015980	ddx20	80	71.601	Seriola_dumerili
ENSAMXG00000040738	ddx20	73	70.134	ENSSLDG00000000437	ddx20	73	70.370	Seriola_lalandi_dorsalis
ENSAMXG00000040738	ddx20	62	52.390	ENSSARG00000013569	DDX20	62	52.390	Sorex_araneus
ENSAMXG00000040738	ddx20	99	56.610	ENSSPAG00000020022	ddx20	72	73.310	Stegastes_partitus
ENSAMXG00000040738	ddx20	70	61.969	ENSSSCG00000006783	DDX20	69	61.969	Sus_scrofa
ENSAMXG00000040738	ddx20	67	61.028	ENSTGUG00000013660	DDX20	91	59.084	Taeniopygia_guttata
ENSAMXG00000040738	ddx20	79	69.140	ENSTRUG00000023712	ddx20	74	69.140	Takifugu_rubripes
ENSAMXG00000040738	ddx20	99	52.994	ENSTNIG00000019425	ddx20	75	68.687	Tetraodon_nigroviridis
ENSAMXG00000040738	ddx20	55	75.000	ENSTTRG00000005131	DDX20	54	75.000	Tursiops_truncatus
ENSAMXG00000040738	ddx20	82	56.457	ENSUAMG00000018924	DDX20	73	57.307	Ursus_americanus
ENSAMXG00000040738	ddx20	73	60.385	ENSUMAG00000013897	DDX20	66	60.769	Ursus_maritimus
ENSAMXG00000040738	ddx20	70	62.349	ENSVPAG00000010031	DDX20	70	62.349	Vicugna_pacos
ENSAMXG00000040738	ddx20	76	62.500	ENSVVUG00000016236	DDX20	70	62.544	Vulpes_vulpes
ENSAMXG00000040738	ddx20	70	62.347	ENSXETG00000013568	ddx20	75	62.413	Xenopus_tropicalis
ENSAMXG00000040738	ddx20	73	68.395	ENSXCOG00000007952	ddx20	84	67.095	Xiphophorus_couchianus
ENSAMXG00000040738	ddx20	73	69.076	ENSXMAG00000007573	ddx20	86	66.453	Xiphophorus_maculatus