EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000040754 (Gene tree)
Gene ID: 103036849
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8603 bases
Position: chrAPWO02000037.1:814619-823221
Accession: 103036849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037026	RRM_1	PF00076.22	8.5e-19	1	1
ENSAMXP00000037026	RRM_3	PF08777.11	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050515	-	1638	XM_007242149	ENSAMXP00000037026	174 (aa)	XP_007242211	UPI000BBD59DA

Gene Model

Click here to download ENSAMXG00000040754's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG
amex03015	mRNA surveillance pathway	KEGG
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040754	rbm8a	87	92.763	ENSG00000265241	RBM8A	87	92.763	Homo_sapiens
ENSAMXG00000040754	rbm8a	100	96.000	ENSAPOG00000009727	rbm8a	100	96.000	Acanthochromis_polyacanthus
ENSAMXG00000040754	rbm8a	87	90.968	ENSAMEG00000017623	RBM8A	88	90.968	Ailuropoda_melanoleuca
ENSAMXG00000040754	rbm8a	92	96.875	ENSACIG00000017678	rbm8a	100	96.875	Amphilophus_citrinellus
ENSAMXG00000040754	rbm8a	100	96.000	ENSAOCG00000023887	rbm8a	85	96.000	Amphiprion_ocellaris
ENSAMXG00000040754	rbm8a	100	96.000	ENSAPEG00000022847	rbm8a	85	96.000	Amphiprion_percula
ENSAMXG00000040754	rbm8a	100	96.000	ENSATEG00000005630	rbm8a	100	96.000	Anabas_testudineus
ENSAMXG00000040754	rbm8a	87	92.763	ENSANAG00000004525	RBM8A	87	92.763	Aotus_nancymaae
ENSAMXG00000040754	rbm8a	100	96.000	ENSACLG00000009627	rbm8a	100	96.000	Astatotilapia_calliptera
ENSAMXG00000040754	rbm8a	83	53.741	WBGene00004387	rnp-4	80	61.538	Caenorhabditis_elegans
ENSAMXG00000040754	rbm8a	87	92.763	ENSCJAG00000046869	RBM8A	87	92.763	Callithrix_jacchus
ENSAMXG00000040754	rbm8a	87	92.763	ENSCAFG00000023172	RBM8A	87	92.763	Canis_familiaris
ENSAMXG00000040754	rbm8a	87	92.763	ENSCAFG00020019945	RBM8A	87	92.763	Canis_lupus_dingo
ENSAMXG00000040754	rbm8a	87	92.763	ENSCHIG00000012114	RBM8A	87	92.763	Capra_hircus
ENSAMXG00000040754	rbm8a	87	92.763	ENSTSYG00000028809	RBM8A	87	92.763	Carlito_syrichta
ENSAMXG00000040754	rbm8a	64	91.964	ENSCAPG00000014086	RBM8A	84	92.233	Cavia_aperea
ENSAMXG00000040754	rbm8a	91	93.038	ENSCPOG00000022453	RBM8A	90	92.763	Cavia_porcellus
ENSAMXG00000040754	rbm8a	87	92.763	ENSCCAG00000028589	-	87	92.763	Cebus_capucinus
ENSAMXG00000040754	rbm8a	87	92.105	ENSCCAG00000022460	-	87	92.105	Cebus_capucinus
ENSAMXG00000040754	rbm8a	87	92.763	ENSCATG00000021691	RBM8A	87	92.763	Cercocebus_atys
ENSAMXG00000040754	rbm8a	87	92.763	ENSCLAG00000000547	RBM8A	87	92.763	Chinchilla_lanigera
ENSAMXG00000040754	rbm8a	87	92.763	ENSCSAG00000001779	RBM8A	87	92.763	Chlorocebus_sabaeus
ENSAMXG00000040754	rbm8a	87	93.421	ENSCPBG00000007941	RBM8A	70	93.421	Chrysemys_picta_bellii
ENSAMXG00000040754	rbm8a	91	63.522	ENSCING00000004877	-	89	65.563	Ciona_intestinalis
ENSAMXG00000040754	rbm8a	89	63.871	ENSCSAVG00000005685	-	89	64.901	Ciona_savignyi
ENSAMXG00000040754	rbm8a	87	92.763	ENSCANG00000042182	RBM8A	87	92.763	Colobus_angolensis_palliatus
ENSAMXG00000040754	rbm8a	87	92.763	ENSCGRG00001002681	-	87	92.763	Cricetulus_griseus_chok1gshd
ENSAMXG00000040754	rbm8a	99	79.191	ENSCGRG00001003032	-	87	78.289	Cricetulus_griseus_chok1gshd
ENSAMXG00000040754	rbm8a	87	92.763	ENSCGRG00000006832	-	87	92.763	Cricetulus_griseus_crigri
ENSAMXG00000040754	rbm8a	91	95.570	ENSCSEG00000011865	rbm8a	86	96.026	Cynoglossus_semilaevis
ENSAMXG00000040754	rbm8a	91	92.405	ENSCVAG00000020734	rbm8a	86	92.715	Cyprinodon_variegatus
ENSAMXG00000040754	rbm8a	100	96.552	ENSDARG00000016516	rbm8a	100	96.552	Danio_rerio
ENSAMXG00000040754	rbm8a	52	85.714	ENSDNOG00000025265	-	100	85.714	Dasypus_novemcinctus
ENSAMXG00000040754	rbm8a	87	92.763	ENSDORG00000027340	-	95	85.890	Dipodomys_ordii
ENSAMXG00000040754	rbm8a	95	61.905	FBgn0033378	tsu	92	63.636	Drosophila_melanogaster
ENSAMXG00000040754	rbm8a	82	86.713	ENSETEG00000008411	-	81	86.713	Echinops_telfairi
ENSAMXG00000040754	rbm8a	89	77.419	ENSETEG00000017932	-	87	76.821	Echinops_telfairi
ENSAMXG00000040754	rbm8a	90	80.769	ENSEBUG00000010386	rbm8a	86	80.132	Eptatretus_burgeri
ENSAMXG00000040754	rbm8a	87	92.763	ENSEASG00005007455	RBM8A	87	92.763	Equus_asinus_asinus
ENSAMXG00000040754	rbm8a	87	92.763	ENSECAG00000022024	RBM8A	87	92.763	Equus_caballus
ENSAMXG00000040754	rbm8a	87	64.901	ENSEEUG00000008823	RBM8A	87	64.901	Erinaceus_europaeus
ENSAMXG00000040754	rbm8a	89	94.839	ENSELUG00000012464	rbm8a	86	94.702	Esox_lucius
ENSAMXG00000040754	rbm8a	87	92.105	ENSFCAG00000033936	RBM8A	87	92.105	Felis_catus
ENSAMXG00000040754	rbm8a	87	92.763	ENSFDAG00000020821	RBM8A	87	92.763	Fukomys_damarensis
ENSAMXG00000040754	rbm8a	91	93.038	ENSFHEG00000013538	rbm8a	86	93.377	Fundulus_heteroclitus
ENSAMXG00000040754	rbm8a	80	91.367	ENSGMOG00000007353	rbm8a	85	91.111	Gadus_morhua
ENSAMXG00000040754	rbm8a	87	78.947	ENSGALG00000036283	RBM8A	87	78.947	Gallus_gallus
ENSAMXG00000040754	rbm8a	91	93.671	ENSGAFG00000021698	rbm8a	86	94.040	Gambusia_affinis
ENSAMXG00000040754	rbm8a	80	93.525	ENSGACG00000013157	rbm8a	84	93.939	Gasterosteus_aculeatus
ENSAMXG00000040754	rbm8a	87	93.421	ENSGAGG00000023769	RBM8A	87	93.421	Gopherus_agassizii
ENSAMXG00000040754	rbm8a	87	92.763	ENSGGOG00000037248	RBM8A	87	92.763	Gorilla_gorilla
ENSAMXG00000040754	rbm8a	92	96.250	ENSHBUG00000008827	rbm8a	100	96.250	Haplochromis_burtoni
ENSAMXG00000040754	rbm8a	87	92.763	ENSHGLG00000007303	RBM8A	87	92.763	Heterocephalus_glaber_female
ENSAMXG00000040754	rbm8a	87	92.763	ENSHGLG00100012468	RBM8A	87	92.763	Heterocephalus_glaber_male
ENSAMXG00000040754	rbm8a	90	93.590	ENSHCOG00000010122	rbm8a	86	93.377	Hippocampus_comes
ENSAMXG00000040754	rbm8a	89	93.548	ENSIPUG00000006525	rbm8a	78	93.377	Ictalurus_punctatus
ENSAMXG00000040754	rbm8a	87	92.105	ENSSTOG00000013917	RBM8A	87	92.105	Ictidomys_tridecemlineatus
ENSAMXG00000040754	rbm8a	87	92.763	ENSJJAG00000009488	-	87	92.763	Jaculus_jaculus
ENSAMXG00000040754	rbm8a	91	93.671	ENSKMAG00000014454	rbm8a	86	94.040	Kryptolebias_marmoratus
ENSAMXG00000040754	rbm8a	91	95.570	ENSLBEG00000015720	rbm8a	86	96.026	Labrus_bergylta
ENSAMXG00000040754	rbm8a	89	92.994	ENSLACG00000014365	RBM8A	88	92.857	Latimeria_chalumnae
ENSAMXG00000040754	rbm8a	100	96.552	ENSLOCG00000009082	rbm8a	100	96.552	Lepisosteus_oculatus
ENSAMXG00000040754	rbm8a	99	65.537	ENSLAFG00000011031	-	87	62.821	Loxodonta_africana
ENSAMXG00000040754	rbm8a	89	92.903	ENSLAFG00000021886	-	87	92.715	Loxodonta_africana
ENSAMXG00000040754	rbm8a	87	92.763	ENSMFAG00000045376	RBM8A	87	92.763	Macaca_fascicularis
ENSAMXG00000040754	rbm8a	92	88.623	ENSMMUG00000016051	RBM8A	95	88.050	Macaca_mulatta
ENSAMXG00000040754	rbm8a	87	92.763	ENSMNEG00000040422	RBM8A	87	92.763	Macaca_nemestrina
ENSAMXG00000040754	rbm8a	87	92.763	ENSMLEG00000039155	RBM8A	87	92.763	Mandrillus_leucophaeus
ENSAMXG00000040754	rbm8a	91	93.671	ENSMAMG00000010565	rbm8a	86	94.040	Mastacembelus_armatus
ENSAMXG00000040754	rbm8a	100	96.000	ENSMZEG00005016453	rbm8a	100	96.000	Maylandia_zebra
ENSAMXG00000040754	rbm8a	87	92.763	ENSMAUG00000016783	-	95	86.420	Mesocricetus_auratus
ENSAMXG00000040754	rbm8a	92	74.375	ENSMICG00000037163	-	93	76.821	Microcebus_murinus
ENSAMXG00000040754	rbm8a	87	92.763	ENSMICG00000031698	-	87	92.763	Microcebus_murinus
ENSAMXG00000040754	rbm8a	87	92.763	ENSMOCG00000017782	-	87	92.763	Microtus_ochrogaster
ENSAMXG00000040754	rbm8a	92	82.500	ENSMMOG00000017179	rbm8a	89	82.119	Mola_mola
ENSAMXG00000040754	rbm8a	87	92.105	ENSMODG00000018752	RBM8A	87	92.105	Monodelphis_domestica
ENSAMXG00000040754	rbm8a	91	94.304	ENSMALG00000010145	rbm8a	86	94.702	Monopterus_albus
ENSAMXG00000040754	rbm8a	87	92.763	MGP_CAROLIEiJ_G0025383	Rbm8a	95	85.890	Mus_caroli
ENSAMXG00000040754	rbm8a	87	89.474	MGP_CAROLIEiJ_G0014951	Rbm8a2	87	89.474	Mus_caroli
ENSAMXG00000040754	rbm8a	87	92.763	ENSMUSG00000038374	Rbm8a	95	85.890	Mus_musculus
ENSAMXG00000040754	rbm8a	87	90.132	ENSMUSG00000078184	Rbm8a2	87	90.132	Mus_musculus
ENSAMXG00000040754	rbm8a	87	92.763	MGP_PahariEiJ_G0026828	-	95	85.890	Mus_pahari
ENSAMXG00000040754	rbm8a	87	92.763	MGP_SPRETEiJ_G0026330	Rbm8a	95	85.890	Mus_spretus
ENSAMXG00000040754	rbm8a	87	92.763	ENSMPUG00000000775	RBM8A	87	92.763	Mustela_putorius_furo
ENSAMXG00000040754	rbm8a	87	84.211	ENSMLUG00000022711	-	87	84.211	Myotis_lucifugus
ENSAMXG00000040754	rbm8a	87	92.763	ENSMLUG00000017436	-	87	92.763	Myotis_lucifugus
ENSAMXG00000040754	rbm8a	89	92.903	ENSNGAG00000016038	-	87	92.715	Nannospalax_galili
ENSAMXG00000040754	rbm8a	100	96.000	ENSNBRG00000004541	rbm8a	100	96.000	Neolamprologus_brichardi
ENSAMXG00000040754	rbm8a	87	92.763	ENSNLEG00000029632	RBM8A	87	92.763	Nomascus_leucogenys
ENSAMXG00000040754	rbm8a	63	91.743	ENSMEUG00000016058	RBM8A	83	91.743	Notamacropus_eugenii
ENSAMXG00000040754	rbm8a	66	92.105	ENSOPRG00000013316	RBM8A	100	92.105	Ochotona_princeps
ENSAMXG00000040754	rbm8a	87	92.763	ENSODEG00000000114	-	87	92.763	Octodon_degus
ENSAMXG00000040754	rbm8a	87	79.605	ENSODEG00000002094	-	86	79.605	Octodon_degus
ENSAMXG00000040754	rbm8a	87	79.605	ENSODEG00000008563	-	87	79.605	Octodon_degus
ENSAMXG00000040754	rbm8a	100	96.000	ENSONIG00000008608	rbm8a	100	96.000	Oreochromis_niloticus
ENSAMXG00000040754	rbm8a	87	90.968	ENSOCUG00000025693	RBM8A	88	90.968	Oryctolagus_cuniculus
ENSAMXG00000040754	rbm8a	91	93.038	ENSORLG00000016263	rbm8a	86	93.377	Oryzias_latipes
ENSAMXG00000040754	rbm8a	92	93.125	ENSORLG00020012904	rbm8a	80	93.377	Oryzias_latipes_hni
ENSAMXG00000040754	rbm8a	91	93.038	ENSORLG00015018824	rbm8a	86	93.377	Oryzias_latipes_hsok
ENSAMXG00000040754	rbm8a	91	93.671	ENSOMEG00000021533	rbm8a	67	94.040	Oryzias_melastigma
ENSAMXG00000040754	rbm8a	87	90.968	ENSOGAG00000000202	RBM8A	88	90.968	Otolemur_garnettii
ENSAMXG00000040754	rbm8a	87	92.105	ENSOARG00000020634	RBM8A	87	92.105	Ovis_aries
ENSAMXG00000040754	rbm8a	87	92.763	ENSPPAG00000029116	RBM8A	87	92.763	Pan_paniscus
ENSAMXG00000040754	rbm8a	87	92.105	ENSPPRG00000008243	RBM8A	87	92.105	Panthera_pardus
ENSAMXG00000040754	rbm8a	87	92.763	ENSPTIG00000009472	RBM8A	87	92.763	Panthera_tigris_altaica
ENSAMXG00000040754	rbm8a	87	92.763	ENSPTRG00000001201	RBM8A	87	92.763	Pan_troglodytes
ENSAMXG00000040754	rbm8a	87	92.763	ENSPANG00000020584	RBM8A	87	92.763	Papio_anubis
ENSAMXG00000040754	rbm8a	89	93.548	ENSPKIG00000020558	rbm8a	87	93.377	Paramormyrops_kingsleyae
ENSAMXG00000040754	rbm8a	90	95.513	ENSPKIG00000009551	rbm8a	64	95.364	Paramormyrops_kingsleyae
ENSAMXG00000040754	rbm8a	100	96.571	ENSPMGG00000010122	rbm8a	100	96.571	Periophthalmus_magnuspinnatus
ENSAMXG00000040754	rbm8a	87	92.763	ENSPEMG00000018117	-	87	92.763	Peromyscus_maniculatus_bairdii
ENSAMXG00000040754	rbm8a	87	92.105	ENSPCIG00000011931	RBM8A	87	92.105	Phascolarctos_cinereus
ENSAMXG00000040754	rbm8a	91	94.304	ENSPFOG00000010695	rbm8a	86	94.702	Poecilia_formosa
ENSAMXG00000040754	rbm8a	91	94.304	ENSPLAG00000009183	rbm8a	86	94.702	Poecilia_latipinna
ENSAMXG00000040754	rbm8a	91	94.304	ENSPMEG00000013950	rbm8a	86	94.702	Poecilia_mexicana
ENSAMXG00000040754	rbm8a	92	93.750	ENSPREG00000017572	rbm8a	94	94.040	Poecilia_reticulata
ENSAMXG00000040754	rbm8a	87	92.763	ENSPPYG00000000929	RBM8A	87	92.763	Pongo_abelii
ENSAMXG00000040754	rbm8a	89	92.258	ENSPCAG00000002146	-	87	92.053	Procavia_capensis
ENSAMXG00000040754	rbm8a	87	92.763	ENSPCOG00000022886	RBM8A	87	92.763	Propithecus_coquereli
ENSAMXG00000040754	rbm8a	87	92.763	ENSPVAG00000014471	RBM8A	87	92.763	Pteropus_vampyrus
ENSAMXG00000040754	rbm8a	100	96.000	ENSPNYG00000013564	rbm8a	100	96.000	Pundamilia_nyererei
ENSAMXG00000040754	rbm8a	100	98.276	ENSPNAG00000028502	rbm8a	100	98.276	Pygocentrus_nattereri
ENSAMXG00000040754	rbm8a	87	92.763	ENSRNOG00000021215	Rbm8a	87	92.763	Rattus_norvegicus
ENSAMXG00000040754	rbm8a	87	92.105	ENSRBIG00000039233	RBM8A	87	92.105	Rhinopithecus_bieti
ENSAMXG00000040754	rbm8a	87	92.763	ENSRROG00000040324	-	87	92.763	Rhinopithecus_roxellana
ENSAMXG00000040754	rbm8a	87	86.755	ENSRROG00000033023	-	86	86.755	Rhinopithecus_roxellana
ENSAMXG00000040754	rbm8a	87	92.763	ENSSBOG00000031316	RBM8A	87	92.763	Saimiri_boliviensis_boliviensis
ENSAMXG00000040754	rbm8a	87	92.105	ENSSHAG00000018629	RBM8A	87	92.105	Sarcophilus_harrisii
ENSAMXG00000040754	rbm8a	89	92.903	ENSSFOG00015024171	rbm8a	87	92.715	Scleropages_formosus
ENSAMXG00000040754	rbm8a	100	96.552	ENSSFOG00015009007	rbm8a	100	96.552	Scleropages_formosus
ENSAMXG00000040754	rbm8a	91	94.937	ENSSMAG00000012998	rbm8a	86	95.364	Scophthalmus_maximus
ENSAMXG00000040754	rbm8a	100	96.000	ENSSDUG00000005911	rbm8a	100	96.000	Seriola_dumerili
ENSAMXG00000040754	rbm8a	100	96.000	ENSSLDG00000011664	rbm8a	100	96.000	Seriola_lalandi_dorsalis
ENSAMXG00000040754	rbm8a	87	92.763	ENSSARG00000013289	RBM8A	87	92.763	Sorex_araneus
ENSAMXG00000040754	rbm8a	87	94.079	ENSSPUG00000001576	RBM8A	87	94.079	Sphenodon_punctatus
ENSAMXG00000040754	rbm8a	100	96.000	ENSSPAG00000012181	rbm8a	100	96.000	Stegastes_partitus
ENSAMXG00000040754	rbm8a	87	92.763	ENSSSCG00000028509	RBM8A	87	92.763	Sus_scrofa
ENSAMXG00000040754	rbm8a	87	90.789	ENSTGUG00000004447	RBM8A	87	90.789	Taeniopygia_guttata
ENSAMXG00000040754	rbm8a	91	93.671	ENSTRUG00000013173	rbm8a	86	94.040	Takifugu_rubripes
ENSAMXG00000040754	rbm8a	91	93.038	ENSTNIG00000006869	rbm8a	86	93.377	Tetraodon_nigroviridis
ENSAMXG00000040754	rbm8a	66	92.105	ENSTBEG00000014947	RBM8A	100	92.105	Tupaia_belangeri
ENSAMXG00000040754	rbm8a	74	92.248	ENSTTRG00000009081	RBM8A	85	92.248	Tursiops_truncatus
ENSAMXG00000040754	rbm8a	87	92.763	ENSUAMG00000021929	RBM8A	87	92.763	Ursus_americanus
ENSAMXG00000040754	rbm8a	87	92.763	ENSUMAG00000010298	RBM8A	87	92.763	Ursus_maritimus
ENSAMXG00000040754	rbm8a	87	92.763	ENSVVUG00000007486	RBM8A	87	92.763	Vulpes_vulpes
ENSAMXG00000040754	rbm8a	91	93.671	ENSXCOG00000004369	rbm8a	86	94.040	Xiphophorus_couchianus
ENSAMXG00000040754	rbm8a	91	93.671	ENSXMAG00000013463	rbm8a	94	92.715	Xiphophorus_maculatus