EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000040757 (Gene tree)
Gene ID: 103029836
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10581 bases
Position: chr14:35527497-35538077
Accession: 103029836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030590	zf-met	PF12874.7	1.1e-27	1	4
ENSAMXP00000030590	zf-met	PF12874.7	1.1e-27	2	4
ENSAMXP00000030590	zf-met	PF12874.7	1.1e-27	3	4
ENSAMXP00000030590	zf-met	PF12874.7	1.1e-27	4	4
ENSAMXP00000034592	zf-met	PF12874.7	1.3e-18	1	3
ENSAMXP00000034592	zf-met	PF12874.7	1.3e-18	2	3
ENSAMXP00000034592	zf-met	PF12874.7	1.3e-18	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047274	-	5689	XM_007253937	ENSAMXP00000030590	632 (aa)	XP_007253999	UPI000BBD6BB0
ENSAMXT00000056167	-	5924	-	ENSAMXP00000034592	510 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040757's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040757	-	55	42.500	ENSAPEG00000002169	-	56	43.793	Amphiprion_percula
ENSAMXG00000040757	-	74	39.425	ENSPKIG00000016531	-	54	51.724	Paramormyrops_kingsleyae
ENSAMXG00000040757	-	99	34.291	ENSPFOG00000010723	-	69	36.697	Poecilia_formosa
ENSAMXG00000040757	-	99	34.923	ENSPLAG00000012038	-	58	42.945	Poecilia_latipinna