EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040774 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3899 bases
Position: chrAPWO02002305.1:176122-180020
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000053664	RVT_1	PF00078.27	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043354	-	1020	-	ENSAMXP00000053664	339 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040774	-	60	48.511	ENSAMXG00000041059	-	88	48.511
ENSAMXG00000040774	-	54	53.488	ENSAMXG00000031846	-	61	53.488
ENSAMXG00000040774	-	96	45.810	ENSAMXG00000034262	-	93	45.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040774	-	58	51.542	ENSPNAG00000014783	-	76	51.542	Pygocentrus_nattereri