EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040892 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4734 bases
Position: chrAPWO02000061.1:953511-958244
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034183	RVT_1	PF00078.27	1.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045638	-	4734	-	ENSAMXP00000034183	1577 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040892	-	86	69.559	ENSAMXG00000038578	-	99	69.412
ENSAMXG00000040892	-	50	33.538	ENSAMXG00000039110	-	58	33.538
ENSAMXG00000040892	-	50	37.844	ENSAMXG00000039114	-	79	37.844
ENSAMXG00000040892	-	71	51.621	ENSAMXG00000041112	-	91	52.464
ENSAMXG00000040892	-	56	38.409	ENSAMXG00000030987	-	58	38.068
ENSAMXG00000040892	-	50	36.730	ENSAMXG00000040695	-	54	36.730
ENSAMXG00000040892	-	57	38.829	ENSAMXG00000029230	-	60	38.829
ENSAMXG00000040892	-	56	30.460	ENSAMXG00000036680	-	58	30.460
ENSAMXG00000040892	-	51	35.242	ENSAMXG00000040885	-	62	34.967
ENSAMXG00000040892	-	59	37.093	ENSAMXG00000032559	-	86	37.093
ENSAMXG00000040892	-	54	31.463	ENSAMXG00000035138	-	57	33.480
ENSAMXG00000040892	-	97	59.123	ENSAMXG00000031698	-	94	59.696
ENSAMXG00000040892	-	50	31.441	ENSAMXG00000039912	-	57	31.441
ENSAMXG00000040892	-	50	33.623	ENSAMXG00000044052	-	53	33.623
ENSAMXG00000040892	-	51	32.018	ENSAMXG00000032783	-	61	32.018
ENSAMXG00000040892	-	51	37.805	ENSAMXG00000042521	-	62	37.805
ENSAMXG00000040892	-	59	39.830	ENSAMXG00000038169	-	75	38.690
ENSAMXG00000040892	-	85	52.518	ENSAMXG00000030902	-	93	52.230
ENSAMXG00000040892	-	51	37.022	ENSAMXG00000038338	-	60	37.022
ENSAMXG00000040892	-	55	38.327	ENSAMXG00000034382	-	77	38.327
ENSAMXG00000040892	-	57	31.159	ENSAMXG00000032330	-	61	31.159
ENSAMXG00000040892	-	52	33.551	ENSAMXG00000040149	-	52	33.551
ENSAMXG00000040892	-	58	36.220	ENSAMXG00000033629	-	53	36.220
ENSAMXG00000040892	-	51	35.581	ENSAMXG00000030479	-	56	37.500
ENSAMXG00000040892	-	52	36.667	ENSAMXG00000043385	-	62	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040892	-	75	36.364	ENSAPOG00000012135	-	98	36.279	Acanthochromis_polyacanthus
ENSAMXG00000040892	-	60	39.854	ENSAPOG00000008045	-	97	39.749	Acanthochromis_polyacanthus
ENSAMXG00000040892	-	89	46.829	ENSACLG00000002180	-	92	47.516	Astatotilapia_calliptera
ENSAMXG00000040892	-	88	58.067	ENSACLG00000027291	-	92	56.486	Astatotilapia_calliptera
ENSAMXG00000040892	-	87	35.527	ENSACLG00000024091	-	88	35.502	Astatotilapia_calliptera
ENSAMXG00000040892	-	87	35.740	ENSACLG00000025719	-	88	35.714	Astatotilapia_calliptera
ENSAMXG00000040892	-	93	55.323	ENSACLG00000017808	-	91	54.987	Astatotilapia_calliptera
ENSAMXG00000040892	-	66	33.887	ENSACLG00000001563	-	100	34.254	Astatotilapia_calliptera
ENSAMXG00000040892	-	93	55.256	ENSACLG00000014870	-	91	54.919	Astatotilapia_calliptera
ENSAMXG00000040892	-	88	33.195	ENSACLG00000026879	-	90	33.080	Astatotilapia_calliptera
ENSAMXG00000040892	-	59	38.420	ENSACLG00000014619	-	62	38.420	Astatotilapia_calliptera
ENSAMXG00000040892	-	51	42.054	ENSACLG00000007343	-	97	41.932	Astatotilapia_calliptera
ENSAMXG00000040892	-	59	60.981	ENSACLG00000018181	-	98	60.554	Astatotilapia_calliptera
ENSAMXG00000040892	-	89	60.360	ENSACLG00000018060	-	91	59.459	Astatotilapia_calliptera
ENSAMXG00000040892	-	59	38.420	ENSACLG00000019876	-	61	38.420	Astatotilapia_calliptera
ENSAMXG00000040892	-	87	35.424	ENSACLG00000017161	-	88	35.495	Astatotilapia_calliptera
ENSAMXG00000040892	-	95	53.796	ENSACLG00000013572	-	93	53.636	Astatotilapia_calliptera
ENSAMXG00000040892	-	93	55.189	ENSACLG00000000499	-	91	54.852	Astatotilapia_calliptera
ENSAMXG00000040892	-	87	35.527	ENSACLG00000009628	-	88	35.502	Astatotilapia_calliptera
ENSAMXG00000040892	-	59	36.926	ENSACLG00000027730	-	80	36.926	Astatotilapia_calliptera
ENSAMXG00000040892	-	53	36.718	ENSCPBG00000011626	-	99	36.482	Chrysemys_picta_bellii
ENSAMXG00000040892	-	51	59.119	ENSCVAG00000009912	-	99	58.730	Cyprinodon_variegatus
ENSAMXG00000040892	-	72	60.000	ENSELUG00000000948	-	99	58.853	Esox_lucius
ENSAMXG00000040892	-	65	30.798	ENSFHEG00000000971	-	89	30.522	Fundulus_heteroclitus
ENSAMXG00000040892	-	63	38.538	ENSGAGG00000014450	-	88	38.340	Gopherus_agassizii
ENSAMXG00000040892	-	53	38.975	ENSGAGG00000020521	-	99	38.737	Gopherus_agassizii
ENSAMXG00000040892	-	50	37.656	ENSGAGG00000025282	-	67	37.406	Gopherus_agassizii
ENSAMXG00000040892	-	94	31.120	ENSGAGG00000022240	-	95	30.867	Gopherus_agassizii
ENSAMXG00000040892	-	53	38.975	ENSGAGG00000012039	-	99	38.737	Gopherus_agassizii
ENSAMXG00000040892	-	55	39.286	ENSIPUG00000000601	-	93	39.241	Ictalurus_punctatus
ENSAMXG00000040892	-	68	56.490	ENSMAMG00000018393	-	100	56.204	Mastacembelus_armatus
ENSAMXG00000040892	-	67	58.785	ENSMZEG00005000633	-	99	58.411	Maylandia_zebra
ENSAMXG00000040892	-	87	35.348	ENSORLG00000026546	-	89	35.348	Oryzias_latipes
ENSAMXG00000040892	-	90	34.532	ENSORLG00000028795	-	89	35.173	Oryzias_latipes
ENSAMXG00000040892	-	90	33.948	ENSORLG00000027831	-	91	34.051	Oryzias_latipes
ENSAMXG00000040892	-	99	52.842	ENSORLG00000029675	-	94	54.647	Oryzias_latipes
ENSAMXG00000040892	-	87	36.169	ENSORLG00000030265	-	88	35.883	Oryzias_latipes
ENSAMXG00000040892	-	90	34.789	ENSORLG00000030542	-	89	35.445	Oryzias_latipes
ENSAMXG00000040892	-	99	53.029	ENSORLG00000029874	-	94	54.843	Oryzias_latipes
ENSAMXG00000040892	-	87	36.097	ENSORLG00000025739	-	88	35.811	Oryzias_latipes
ENSAMXG00000040892	-	95	55.335	ENSORLG00000026629	-	94	55.225	Oryzias_latipes
ENSAMXG00000040892	-	87	36.052	ENSORLG00000024220	-	88	35.765	Oryzias_latipes
ENSAMXG00000040892	-	95	55.467	ENSORLG00000023181	-	94	55.357	Oryzias_latipes
ENSAMXG00000040892	-	95	55.305	ENSORLG00000026873	-	94	55.423	Oryzias_latipes
ENSAMXG00000040892	-	87	35.265	ENSORLG00000026665	-	89	35.265	Oryzias_latipes
ENSAMXG00000040892	-	68	55.220	ENSORLG00000028632	-	99	54.945	Oryzias_latipes
ENSAMXG00000040892	-	87	35.014	ENSORLG00000024904	-	90	34.922	Oryzias_latipes
ENSAMXG00000040892	-	90	34.584	ENSORLG00000028609	-	89	35.302	Oryzias_latipes
ENSAMXG00000040892	-	87	35.137	ENSORLG00000024233	-	89	35.137	Oryzias_latipes
ENSAMXG00000040892	-	87	36.169	ENSORLG00000027568	-	88	35.883	Oryzias_latipes
ENSAMXG00000040892	-	84	34.174	ENSORLG00000022369	-	88	34.842	Oryzias_latipes
ENSAMXG00000040892	-	59	62.062	ENSORLG00000026676	-	96	62.062	Oryzias_latipes
ENSAMXG00000040892	-	87	35.562	ENSORLG00020001422	-	89	35.491	Oryzias_latipes_hni
ENSAMXG00000040892	-	87	34.943	ENSORLG00020014203	-	88	34.851	Oryzias_latipes_hni
ENSAMXG00000040892	-	86	34.673	ENSORLG00020020268	-	89	34.579	Oryzias_latipes_hni
ENSAMXG00000040892	-	87	34.943	ENSORLG00020003869	-	88	34.851	Oryzias_latipes_hni
ENSAMXG00000040892	-	87	36.097	ENSORLG00020008293	-	88	35.811	Oryzias_latipes_hni
ENSAMXG00000040892	-	90	34.532	ENSORLG00015017778	-	89	35.173	Oryzias_latipes_hsok
ENSAMXG00000040892	-	90	34.600	ENSORLG00015018878	-	89	35.244	Oryzias_latipes_hsok
ENSAMXG00000040892	-	87	35.562	ENSOMEG00000003712	-	89	35.562	Oryzias_melastigma
ENSAMXG00000040892	-	98	55.663	ENSOMEG00000009987	-	97	56.291	Oryzias_melastigma
ENSAMXG00000040892	-	57	37.916	ENSPSIG00000000353	-	75	37.916	Pelodiscus_sinensis
ENSAMXG00000040892	-	54	38.263	ENSPSIG00000001658	-	95	38.146	Pelodiscus_sinensis
ENSAMXG00000040892	-	85	32.480	ENSPSIG00000000767	-	94	32.480	Pelodiscus_sinensis
ENSAMXG00000040892	-	92	31.483	ENSPSIG00000000489	-	91	32.071	Pelodiscus_sinensis
ENSAMXG00000040892	-	67	40.814	ENSPSIG00000000994	-	82	40.698	Pelodiscus_sinensis
ENSAMXG00000040892	-	51	41.350	ENSPMEG00000019585	-	99	40.736	Poecilia_mexicana
ENSAMXG00000040892	-	78	33.700	ENSPMEG00000016355	-	99	33.778	Poecilia_mexicana
ENSAMXG00000040892	-	92	50.235	ENSPREG00000000390	-	93	50.000	Poecilia_reticulata
ENSAMXG00000040892	-	95	50.515	ENSPREG00000004954	-	96	51.143	Poecilia_reticulata
ENSAMXG00000040892	-	56	39.459	ENSSDUG00000002460	-	99	32.855	Seriola_dumerili
ENSAMXG00000040892	-	99	54.597	ENSXMAG00000021298	-	97	54.602	Xiphophorus_maculatus
ENSAMXG00000040892	-	68	50.139	ENSXMAG00000030089	-	99	50.139	Xiphophorus_maculatus
ENSAMXG00000040892	-	88	46.605	ENSXMAG00000023079	-	90	46.671	Xiphophorus_maculatus
ENSAMXG00000040892	-	88	47.863	ENSXMAG00000021213	-	90	47.863	Xiphophorus_maculatus
ENSAMXG00000040892	-	88	47.721	ENSXMAG00000026594	-	90	47.721	Xiphophorus_maculatus
ENSAMXG00000040892	-	82	35.164	ENSXMAG00000030100	-	90	34.985	Xiphophorus_maculatus
ENSAMXG00000040892	-	99	54.853	ENSXMAG00000023319	-	97	54.762	Xiphophorus_maculatus
ENSAMXG00000040892	-	87	35.336	ENSXMAG00000026031	-	89	35.168	Xiphophorus_maculatus
ENSAMXG00000040892	-	88	46.605	ENSXMAG00000023503	-	90	46.671	Xiphophorus_maculatus