EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000040932 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3912 bases
Position: chrAPWO02000413.1:32288-36199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037521	RVT_1	PF00078.27	8.2e-23	1	1
ENSAMXP00000037521	RNase_H	PF00075.24	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046506	-	3912	-	ENSAMXP00000037521	1303 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000040932	-	80	36.407	ENSAMXG00000033060	-	87	36.407
ENSAMXG00000040932	-	81	36.210	ENSAMXG00000033455	-	86	36.210
ENSAMXG00000040932	-	92	36.033	ENSAMXG00000040526	-	99	36.595
ENSAMXG00000040932	-	99	99.538	ENSAMXG00000038047	-	98	99.538
ENSAMXG00000040932	-	73	48.889	ENSAMXG00000038483	-	94	48.889
ENSAMXG00000040932	-	51	30.769	ENSAMXG00000032571	-	52	30.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040932	-	66	46.154	ENSATEG00000004659	-	87	46.154	Anabas_testudineus
ENSAMXG00000040932	-	86	36.029	ENSCSEG00000008943	-	97	36.029	Cynoglossus_semilaevis
ENSAMXG00000040932	-	60	43.561	ENSMAMG00000005691	-	97	43.561	Mastacembelus_armatus