EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000040972 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3094 bases
Position: chr3:7889199-7892292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028858	zf-CCHC	PF00098.23	2.9e-05	1	1
ENSAMXP00000030045	zf-CCHC	PF00098.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046813	-	2015	-	ENSAMXP00000028858	584 (aa)	-	-
ENSAMXT00000034105	-	2115	-	ENSAMXP00000030045	629 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000040972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000040972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000040972	-	89	35.880	ENSG00000141664	ZCCHC2	84	50.495	Homo_sapiens
ENSAMXG00000040972	-	94	37.342	ENSAOCG00000018816	-	70	39.055	Amphiprion_ocellaris
ENSAMXG00000040972	-	96	38.095	ENSAPEG00000012103	-	55	39.724	Amphiprion_percula
ENSAMXG00000040972	-	96	37.278	ENSATEG00000020193	zcchc2	55	38.266	Anabas_testudineus
ENSAMXG00000040972	-	99	35.022	ENSAPLG00000003573	ZCCHC2	67	35.285	Anas_platyrhynchos
ENSAMXG00000040972	-	94	33.226	ENSACAG00000011813	ZCCHC2	51	34.138	Anolis_carolinensis
ENSAMXG00000040972	-	95	37.438	ENSACLG00000004507	-	53	38.361	Astatotilapia_calliptera
ENSAMXG00000040972	-	96	35.759	ENSCAFG00000000073	ZCCHC2	65	35.330	Canis_familiaris
ENSAMXG00000040972	-	96	35.759	ENSCAFG00020017046	ZCCHC2	51	34.414	Canis_lupus_dingo
ENSAMXG00000040972	-	97	34.043	ENSTSYG00000007331	ZCCHC2	72	35.082	Carlito_syrichta
ENSAMXG00000040972	-	96	33.045	ENSCAPG00000014510	ZCCHC2	80	32.756	Cavia_aperea
ENSAMXG00000040972	-	99	34.087	ENSCPOG00000014085	ZCCHC2	66	33.786	Cavia_porcellus
ENSAMXG00000040972	-	89	35.526	ENSCATG00000038478	ZCCHC2	51	34.975	Cercocebus_atys
ENSAMXG00000040972	-	91	35.045	ENSCLAG00000010985	ZCCHC2	71	34.743	Chinchilla_lanigera
ENSAMXG00000040972	-	86	34.975	ENSCSAG00000018187	ZCCHC2	50	34.635	Chlorocebus_sabaeus
ENSAMXG00000040972	-	89	36.334	ENSCHOG00000002359	ZCCHC2	68	34.887	Choloepus_hoffmanni
ENSAMXG00000040972	-	89	35.420	ENSCANG00000029790	ZCCHC2	65	35.091	Colobus_angolensis_palliatus
ENSAMXG00000040972	-	92	35.008	ENSCGRG00000014383	Zcchc2	61	34.703	Cricetulus_griseus_crigri
ENSAMXG00000040972	-	92	32.226	ENSCVAG00000005640	-	50	35.738	Cyprinodon_variegatus
ENSAMXG00000040972	-	99	34.328	ENSDNOG00000015952	ZCCHC2	57	34.478	Dasypus_novemcinctus
ENSAMXG00000040972	-	88	35.144	ENSETEG00000002750	ZCCHC2	61	34.805	Echinops_telfairi
ENSAMXG00000040972	-	97	35.045	ENSEASG00005002645	ZCCHC2	57	34.419	Equus_asinus_asinus
ENSAMXG00000040972	-	97	34.894	ENSECAG00000014990	ZCCHC2	52	34.473	Equus_caballus
ENSAMXG00000040972	-	94	35.913	ENSFALG00000012977	ZCCHC2	56	36.491	Ficedula_albicollis
ENSAMXG00000040972	-	90	35.410	ENSFDAG00000011521	ZCCHC2	70	35.106	Fukomys_damarensis
ENSAMXG00000040972	-	99	35.119	ENSGALG00000012889	ZCCHC2	53	35.285	Gallus_gallus
ENSAMXG00000040972	-	86	35.579	ENSGAGG00000023874	ZCCHC2	55	35.233	Gopherus_agassizii
ENSAMXG00000040972	-	89	35.691	ENSGGOG00000002966	ZCCHC2	51	35.304	Gorilla_gorilla
ENSAMXG00000040972	-	95	37.398	ENSHBUG00000012799	-	52	38.312	Haplochromis_burtoni
ENSAMXG00000040972	-	89	33.445	ENSHGLG00000000903	-	51	33.389	Heterocephalus_glaber_female
ENSAMXG00000040972	-	89	33.779	ENSHGLG00100004917	-	57	32.829	Heterocephalus_glaber_male
ENSAMXG00000040972	-	91	34.277	ENSSTOG00000015357	ZCCHC2	68	33.680	Ictidomys_tridecemlineatus
ENSAMXG00000040972	-	96	35.194	ENSJJAG00000014570	Zcchc2	56	34.756	Jaculus_jaculus
ENSAMXG00000040972	-	80	32.824	ENSLACG00000002296	-	99	33.454	Latimeria_chalumnae
ENSAMXG00000040972	-	95	47.504	ENSLOCG00000010044	zcchc2	52	46.566	Lepisosteus_oculatus
ENSAMXG00000040972	-	89	35.420	ENSMFAG00000033238	ZCCHC2	55	35.033	Macaca_fascicularis
ENSAMXG00000040972	-	89	35.585	ENSMNEG00000033594	ZCCHC2	51	35.197	Macaca_nemestrina
ENSAMXG00000040972	-	89	35.585	ENSMLEG00000031802	ZCCHC2	65	35.255	Mandrillus_leucophaeus
ENSAMXG00000040972	-	97	37.463	ENSMAMG00000021679	-	56	37.574	Mastacembelus_armatus
ENSAMXG00000040972	-	95	37.274	ENSMZEG00005015504	-	52	38.197	Maylandia_zebra
ENSAMXG00000040972	-	99	34.627	ENSMGAG00000004834	ZCCHC2	59	35.075	Meleagris_gallopavo
ENSAMXG00000040972	-	90	34.255	ENSMAUG00000016369	Zcchc2	55	33.948	Mesocricetus_auratus
ENSAMXG00000040972	-	89	35.750	ENSMICG00000001550	ZCCHC2	54	35.420	Microcebus_murinus
ENSAMXG00000040972	-	99	34.081	ENSMODG00000005101	ZCCHC2	52	33.881	Monodelphis_domestica
ENSAMXG00000040972	-	94	34.062	MGP_CAROLIEiJ_G0014486	Zcchc2	71	34.188	Mus_caroli
ENSAMXG00000040972	-	89	34.603	ENSMUSG00000038866	Zcchc2	70	34.017	Mus_musculus
ENSAMXG00000040972	-	89	34.951	MGP_PahariEiJ_G0027720	Zcchc2	71	34.391	Mus_pahari
ENSAMXG00000040972	-	89	35.149	MGP_SPRETEiJ_G0015290	Zcchc2	71	34.583	Mus_spretus
ENSAMXG00000040972	-	99	34.175	ENSMLUG00000009495	ZCCHC2	72	33.979	Myotis_lucifugus
ENSAMXG00000040972	-	97	35.069	ENSNGAG00000022381	Zcchc2	53	34.375	Nannospalax_galili
ENSAMXG00000040972	-	89	35.914	ENSNLEG00000008618	-	65	35.526	Nomascus_leucogenys
ENSAMXG00000040972	-	95	36.334	ENSONIG00000011258	-	51	37.825	Oreochromis_niloticus
ENSAMXG00000040972	-	86	36.155	ENSORLG00000004152	zcchc2	64	36.092	Oryzias_latipes
ENSAMXG00000040972	-	96	36.177	ENSORLG00020009577	-	54	36.307	Oryzias_latipes_hni
ENSAMXG00000040972	-	96	35.804	ENSORLG00015006011	-	54	36.593	Oryzias_latipes_hsok
ENSAMXG00000040972	-	96	36.825	ENSOMEG00000001146	-	54	37.754	Oryzias_melastigma
ENSAMXG00000040972	-	99	34.277	ENSOGAG00000024641	ZCCHC2	72	34.230	Otolemur_garnettii
ENSAMXG00000040972	-	89	35.526	ENSPPAG00000029037	ZCCHC2	52	34.975	Pan_paniscus
ENSAMXG00000040972	-	92	33.934	ENSPPRG00000000176	ZCCHC2	54	34.087	Panthera_pardus
ENSAMXG00000040972	-	97	35.161	ENSPTIG00000008924	ZCCHC2	71	34.385	Panthera_tigris_altaica
ENSAMXG00000040972	-	89	35.585	ENSPANG00000013121	ZCCHC2	51	34.975	Papio_anubis
ENSAMXG00000040972	-	97	42.435	ENSPKIG00000001849	-	50	42.710	Paramormyrops_kingsleyae
ENSAMXG00000040972	-	98	42.439	ENSPKIG00000001677	zcchc2	54	42.114	Paramormyrops_kingsleyae
ENSAMXG00000040972	-	99	33.638	ENSPSIG00000007840	ZCCHC2	91	33.780	Pelodiscus_sinensis
ENSAMXG00000040972	-	97	34.962	ENSPEMG00000015159	Zcchc2	56	34.848	Peromyscus_maniculatus_bairdii
ENSAMXG00000040972	-	99	35.015	ENSPCIG00000011461	ZCCHC2	53	34.615	Phascolarctos_cinereus
ENSAMXG00000040972	-	86	30.924	ENSPFOG00000011854	-	81	36.640	Poecilia_formosa
ENSAMXG00000040972	-	97	34.127	ENSPMEG00000002279	-	53	36.407	Poecilia_mexicana
ENSAMXG00000040972	-	86	34.110	ENSPREG00000011715	zcchc2	52	35.238	Poecilia_reticulata
ENSAMXG00000040972	-	89	35.914	ENSPPYG00000009208	-	62	35.526	Pongo_abelii
ENSAMXG00000040972	-	99	33.780	ENSPCAG00000010194	ZCCHC2	69	34.370	Procavia_capensis
ENSAMXG00000040972	-	97	36.935	ENSPNYG00000021201	-	69	37.842	Pundamilia_nyererei
ENSAMXG00000040972	-	99	73.675	ENSPNAG00000027536	-	54	73.846	Pygocentrus_nattereri
ENSAMXG00000040972	-	89	35.526	ENSRBIG00000035806	ZCCHC2	50	35.197	Rhinopithecus_bieti
ENSAMXG00000040972	-	89	35.526	ENSRROG00000034247	ZCCHC2	51	35.197	Rhinopithecus_roxellana
ENSAMXG00000040972	-	98	34.985	ENSSBOG00000022911	ZCCHC2	71	34.633	Saimiri_boliviensis_boliviensis
ENSAMXG00000040972	-	90	35.366	ENSSHAG00000016133	ZCCHC2	60	35.075	Sarcophilus_harrisii
ENSAMXG00000040972	-	98	45.075	ENSSFOG00015010533	-	71	45.667	Scleropages_formosus
ENSAMXG00000040972	-	92	41.026	ENSSFOG00015012993	-	93	40.360	Scleropages_formosus
ENSAMXG00000040972	-	87	36.578	ENSSMAG00000004119	-	56	38.311	Scophthalmus_maximus
ENSAMXG00000040972	-	97	39.732	ENSSDUG00000002388	-	62	40.385	Seriola_dumerili
ENSAMXG00000040972	-	97	39.163	ENSSLDG00000006969	zcchc2	56	39.911	Seriola_lalandi_dorsalis
ENSAMXG00000040972	-	93	36.120	ENSSPUG00000006991	ZCCHC2	57	34.835	Sphenodon_punctatus
ENSAMXG00000040972	-	96	39.058	ENSSPAG00000011032	-	55	40.455	Stegastes_partitus
ENSAMXG00000040972	-	92	34.277	ENSSSCG00000004897	ZCCHC2	53	33.979	Sus_scrofa
ENSAMXG00000040972	-	89	35.197	ENSTTRG00000013533	ZCCHC2	67	34.647	Tursiops_truncatus
ENSAMXG00000040972	-	97	34.894	ENSVPAG00000009934	ZCCHC2	72	34.172	Vicugna_pacos
ENSAMXG00000040972	-	96	34.455	ENSVVUG00000017624	ZCCHC2	53	34.181	Vulpes_vulpes
ENSAMXG00000040972	-	91	32.387	ENSXETG00000032980	zcchc2	52	32.496	Xenopus_tropicalis