EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041014 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1171 bases
Position: chrAPWO02002288.1:29010-30180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040909	RVT_1	PF00078.27	2.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000029799	-	1171	-	ENSAMXP00000040909	264 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041014's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041014	-	100	49.621	ENSAMXG00000040763	-	67	49.621
ENSAMXG00000041014	-	89	30.252	ENSAMXG00000033367	-	50	30.252
ENSAMXG00000041014	-	52	30.435	ENSAMXG00000043299	-	67	30.435
ENSAMXG00000041014	-	58	30.263	ENSAMXG00000040418	-	69	30.263
ENSAMXG00000041014	-	92	32.258	ENSAMXG00000038901	-	51	32.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041014	-	100	52.075	ENSAPOG00000015742	-	84	52.075	Acanthochromis_polyacanthus
ENSAMXG00000041014	-	99	41.065	ENSAPOG00000014771	-	66	41.065	Acanthochromis_polyacanthus
ENSAMXG00000041014	-	87	45.415	ENSAPOG00000001366	-	64	45.415	Acanthochromis_polyacanthus
ENSAMXG00000041014	-	91	35.537	ENSACIG00000020856	-	52	35.537	Amphilophus_citrinellus
ENSAMXG00000041014	-	83	36.239	ENSACIG00000020849	-	57	36.239	Amphilophus_citrinellus
ENSAMXG00000041014	-	99	40.840	ENSACIG00000010538	-	68	40.840	Amphilophus_citrinellus
ENSAMXG00000041014	-	100	48.106	ENSAOCG00000014605	-	51	48.106	Amphiprion_ocellaris
ENSAMXG00000041014	-	100	34.457	ENSAOCG00000006855	-	54	34.457	Amphiprion_ocellaris
ENSAMXG00000041014	-	100	46.212	ENSAOCG00000019069	-	72	46.212	Amphiprion_ocellaris
ENSAMXG00000041014	-	100	58.712	ENSAOCG00000000894	-	79	58.712	Amphiprion_ocellaris
ENSAMXG00000041014	-	91	35.537	ENSATEG00000019721	-	63	35.537	Anabas_testudineus
ENSAMXG00000041014	-	98	39.615	ENSACAG00000010816	-	73	39.615	Anolis_carolinensis
ENSAMXG00000041014	-	93	53.469	ENSACLG00000012857	-	67	53.469	Astatotilapia_calliptera
ENSAMXG00000041014	-	100	40.149	ENSACLG00000011319	-	69	40.149	Astatotilapia_calliptera
ENSAMXG00000041014	-	89	50.855	ENSACLG00000010837	-	58	50.855	Astatotilapia_calliptera
ENSAMXG00000041014	-	100	50.379	ENSACLG00000013571	-	65	50.379	Astatotilapia_calliptera
ENSAMXG00000041014	-	76	43.500	ENSCPBG00000017828	-	54	43.500	Chrysemys_picta_bellii
ENSAMXG00000041014	-	98	38.462	ENSCVAG00000020933	-	55	38.462	Cyprinodon_variegatus
ENSAMXG00000041014	-	100	53.788	ENSCVAG00000018360	-	64	53.788	Cyprinodon_variegatus
ENSAMXG00000041014	-	100	40.152	ENSELUG00000014378	-	61	40.152	Esox_lucius
ENSAMXG00000041014	-	98	31.939	ENSELUG00000002589	-	55	31.939	Esox_lucius
ENSAMXG00000041014	-	93	39.837	ENSGAGG00000013921	-	66	39.837	Gopherus_agassizii
ENSAMXG00000041014	-	91	38.115	ENSHBUG00000011715	-	60	38.115	Haplochromis_burtoni
ENSAMXG00000041014	-	84	30.631	ENSHBUG00000003796	-	51	30.631	Haplochromis_burtoni
ENSAMXG00000041014	-	100	50.376	ENSHBUG00000007736	-	63	50.376	Haplochromis_burtoni
ENSAMXG00000041014	-	81	37.674	ENSIPUG00000010242	-	57	37.674	Ictalurus_punctatus
ENSAMXG00000041014	-	100	53.030	ENSKMAG00000014393	-	62	53.030	Kryptolebias_marmoratus
ENSAMXG00000041014	-	100	42.803	ENSLBEG00000023714	-	70	42.803	Labrus_bergylta
ENSAMXG00000041014	-	53	47.143	ENSLBEG00000003356	-	82	47.143	Labrus_bergylta
ENSAMXG00000041014	-	98	46.538	ENSLBEG00000020242	-	71	46.538	Labrus_bergylta
ENSAMXG00000041014	-	97	50.192	ENSLBEG00000004148	-	55	50.192	Labrus_bergylta
ENSAMXG00000041014	-	94	53.036	ENSMZEG00005016362	-	87	53.036	Maylandia_zebra
ENSAMXG00000041014	-	83	52.273	ENSMZEG00005006211	-	54	52.273	Maylandia_zebra
ENSAMXG00000041014	-	100	40.149	ENSMZEG00005008304	-	62	40.149	Maylandia_zebra
ENSAMXG00000041014	-	100	40.149	ENSMZEG00005025877	-	62	40.149	Maylandia_zebra
ENSAMXG00000041014	-	100	53.030	ENSMZEG00005017030	-	50	53.030	Maylandia_zebra
ENSAMXG00000041014	-	100	53.030	ENSMZEG00005011529	-	50	53.030	Maylandia_zebra
ENSAMXG00000041014	-	99	49.430	ENSNBRG00000000972	-	65	49.430	Neolamprologus_brichardi
ENSAMXG00000041014	-	97	40.784	ENSNBRG00000013792	-	74	40.784	Neolamprologus_brichardi
ENSAMXG00000041014	-	93	32.927	ENSNBRG00000022130	-	59	32.927	Neolamprologus_brichardi
ENSAMXG00000041014	-	62	51.534	ENSNBRG00000003891	-	81	51.534	Neolamprologus_brichardi
ENSAMXG00000041014	-	100	49.242	ENSNBRG00000012595	-	60	49.242	Neolamprologus_brichardi
ENSAMXG00000041014	-	91	33.878	ENSNBRG00000001934	-	52	33.878	Neolamprologus_brichardi
ENSAMXG00000041014	-	100	50.758	ENSORLG00000024236	-	69	50.758	Oryzias_latipes
ENSAMXG00000041014	-	89	56.410	ENSORLG00000028976	-	61	56.410	Oryzias_latipes
ENSAMXG00000041014	-	100	52.273	ENSORLG00000028706	-	53	52.273	Oryzias_latipes
ENSAMXG00000041014	-	99	50.190	ENSORLG00000023713	-	67	50.190	Oryzias_latipes
ENSAMXG00000041014	-	92	54.545	ENSORLG00000028454	-	77	54.545	Oryzias_latipes
ENSAMXG00000041014	-	100	51.136	ENSORLG00020018629	-	70	51.136	Oryzias_latipes_hni
ENSAMXG00000041014	-	85	33.778	ENSORLG00020004063	-	63	33.778	Oryzias_latipes_hni
ENSAMXG00000041014	-	96	52.756	ENSORLG00020007002	-	100	52.756	Oryzias_latipes_hni
ENSAMXG00000041014	-	100	50.758	ENSORLG00020007779	-	71	50.758	Oryzias_latipes_hni
ENSAMXG00000041014	-	93	53.878	ENSORLG00020014149	-	76	53.878	Oryzias_latipes_hni
ENSAMXG00000041014	-	89	49.573	ENSORLG00020022004	-	80	49.573	Oryzias_latipes_hni
ENSAMXG00000041014	-	75	52.525	ENSORLG00015007976	-	53	52.525	Oryzias_latipes_hsok
ENSAMXG00000041014	-	100	46.038	ENSORLG00015021206	-	52	46.038	Oryzias_latipes_hsok
ENSAMXG00000041014	-	70	41.935	ENSORLG00015021848	-	61	41.935	Oryzias_latipes_hsok
ENSAMXG00000041014	-	85	52.679	ENSORLG00015022393	-	75	52.679	Oryzias_latipes_hsok
ENSAMXG00000041014	-	100	51.894	ENSORLG00015007703	-	68	51.894	Oryzias_latipes_hsok
ENSAMXG00000041014	-	99	42.205	ENSORLG00015020895	-	70	42.205	Oryzias_latipes_hsok
ENSAMXG00000041014	-	80	53.302	ENSORLG00015000419	-	60	53.302	Oryzias_latipes_hsok
ENSAMXG00000041014	-	84	42.793	ENSOMEG00000013211	-	52	42.793	Oryzias_melastigma
ENSAMXG00000041014	-	90	50.628	ENSPKIG00000013511	-	81	50.628	Paramormyrops_kingsleyae
ENSAMXG00000041014	-	62	53.704	ENSPKIG00000024018	-	59	53.704	Paramormyrops_kingsleyae
ENSAMXG00000041014	-	83	42.466	ENSPMGG00000014421	-	52	42.466	Periophthalmus_magnuspinnatus
ENSAMXG00000041014	-	100	35.955	ENSPLAG00000015080	-	63	35.955	Poecilia_latipinna
ENSAMXG00000041014	-	90	33.730	ENSPMEG00000004673	-	63	33.730	Poecilia_mexicana
ENSAMXG00000041014	-	100	30.075	ENSPREG00000021355	-	61	30.075	Poecilia_reticulata
ENSAMXG00000041014	-	98	37.643	ENSPREG00000004933	-	66	37.643	Poecilia_reticulata
ENSAMXG00000041014	-	99	43.295	ENSPREG00000001352	-	73	43.295	Poecilia_reticulata
ENSAMXG00000041014	-	98	37.500	ENSPREG00000010319	-	63	37.500	Poecilia_reticulata
ENSAMXG00000041014	-	87	44.105	ENSPNYG00000023697	-	53	44.105	Pundamilia_nyererei
ENSAMXG00000041014	-	98	32.197	ENSPNYG00000002652	-	67	32.197	Pundamilia_nyererei
ENSAMXG00000041014	-	100	45.455	ENSPNYG00000002466	-	88	45.455	Pundamilia_nyererei
ENSAMXG00000041014	-	100	54.167	ENSPNAG00000002786	-	64	54.167	Pygocentrus_nattereri
ENSAMXG00000041014	-	91	31.120	ENSPNAG00000013604	-	51	31.120	Pygocentrus_nattereri
ENSAMXG00000041014	-	100	48.106	ENSPNAG00000010342	-	83	48.106	Pygocentrus_nattereri
ENSAMXG00000041014	-	99	45.977	ENSPNAG00000024749	-	61	45.977	Pygocentrus_nattereri
ENSAMXG00000041014	-	100	58.333	ENSPNAG00000014375	-	64	58.333	Pygocentrus_nattereri
ENSAMXG00000041014	-	99	43.726	ENSSMAG00000014015	-	57	43.726	Scophthalmus_maximus
ENSAMXG00000041014	-	100	62.500	ENSSDUG00000021791	-	88	62.500	Seriola_dumerili
ENSAMXG00000041014	-	81	36.574	ENSSDUG00000017945	-	58	36.574	Seriola_dumerili
ENSAMXG00000041014	-	92	40.574	ENSSDUG00000015364	-	52	40.574	Seriola_dumerili
ENSAMXG00000041014	-	100	46.970	ENSSLDG00000006955	-	60	46.970	Seriola_lalandi_dorsalis
ENSAMXG00000041014	-	100	48.106	ENSSPUG00000015446	-	59	48.106	Sphenodon_punctatus
ENSAMXG00000041014	-	100	48.485	ENSSPAG00000000151	-	58	48.485	Stegastes_partitus
ENSAMXG00000041014	-	95	38.400	ENSSPAG00000012089	-	66	38.400	Stegastes_partitus
ENSAMXG00000041014	-	91	46.025	ENSXCOG00000016894	-	71	46.025	Xiphophorus_couchianus
ENSAMXG00000041014	-	86	57.709	ENSXMAG00000026184	-	76	57.709	Xiphophorus_maculatus
ENSAMXG00000041014	-	100	36.704	ENSXMAG00000023211	-	58	36.704	Xiphophorus_maculatus