EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041059 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4333 bases
Position: chrAPWO02001941.1:150189-154521
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041993	RVT_1	PF00078.27	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055314	-	804	-	ENSAMXP00000041993	267 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041059	-	88	48.511	ENSAMXG00000040774	-	60	48.511
ENSAMXG00000041059	-	96	40.310	ENSAMXG00000034262	-	66	40.310
ENSAMXG00000041059	-	79	54.762	ENSAMXG00000031846	-	59	54.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041059	-	68	40.437	ENSPNYG00000024085	-	69	40.437	Pundamilia_nyererei
ENSAMXG00000041059	-	83	50.901	ENSPNAG00000014783	-	74	50.901	Pygocentrus_nattereri