EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041082 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3867 bases
Position: chr3:46365079-46368945
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042306	RVT_1	PF00078.27	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046171	-	3867	-	ENSAMXP00000042306	1288 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041082	-	57	30.396	ENSAMXG00000030022	-	65	30.396
ENSAMXG00000041082	-	50	30.197	ENSAMXG00000039473	-	61	30.197
ENSAMXG00000041082	-	57	30.986	ENSAMXG00000043312	-	51	30.986
ENSAMXG00000041082	-	57	31.148	ENSAMXG00000036680	-	54	31.148
ENSAMXG00000041082	-	59	32.525	ENSAMXG00000039912	-	58	32.525
ENSAMXG00000041082	-	99	38.766	ENSAMXG00000042050	-	99	38.766
ENSAMXG00000041082	-	51	31.323	ENSAMXG00000038578	-	50	31.323
ENSAMXG00000041082	-	92	38.267	ENSAMXG00000040613	-	90	38.267
ENSAMXG00000041082	-	53	30.516	ENSAMXG00000032783	-	53	30.516
ENSAMXG00000041082	-	58	33.333	ENSAMXG00000038169	-	63	33.333
ENSAMXG00000041082	-	55	30.176	ENSAMXG00000030908	-	64	30.176
ENSAMXG00000041082	-	55	30.396	ENSAMXG00000032330	-	52	30.396
ENSAMXG00000041082	-	57	30.986	ENSAMXG00000038997	-	51	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041082	-	60	42.452	ENSAPOG00000012090	-	96	42.452	Acanthochromis_polyacanthus
ENSAMXG00000041082	-	66	42.471	ENSACLG00000022170	-	89	42.471	Astatotilapia_calliptera
ENSAMXG00000041082	-	78	38.688	ENSACLG00000005337	-	100	38.688	Astatotilapia_calliptera
ENSAMXG00000041082	-	82	37.239	ENSACLG00000025600	-	97	37.239	Astatotilapia_calliptera
ENSAMXG00000041082	-	65	41.489	ENSACLG00000027702	-	98	41.489	Astatotilapia_calliptera
ENSAMXG00000041082	-	99	39.121	ENSACLG00000017755	-	99	39.121	Astatotilapia_calliptera
ENSAMXG00000041082	-	78	38.760	ENSACLG00000017062	-	99	38.760	Astatotilapia_calliptera
ENSAMXG00000041082	-	97	38.615	ENSACLG00000015817	-	97	38.615	Astatotilapia_calliptera
ENSAMXG00000041082	-	80	38.280	ENSACLG00000018225	-	89	38.280	Astatotilapia_calliptera
ENSAMXG00000041082	-	97	50.158	ENSACLG00000016676	-	96	50.158	Astatotilapia_calliptera
ENSAMXG00000041082	-	78	49.107	ENSACLG00000008642	-	95	49.107	Astatotilapia_calliptera
ENSAMXG00000041082	-	77	39.139	ENSCVAG00000020225	-	99	39.139	Cyprinodon_variegatus
ENSAMXG00000041082	-	73	59.617	ENSHCOG00000007453	-	99	59.617	Hippocampus_comes
ENSAMXG00000041082	-	95	31.781	ENSORLG00000027118	-	94	31.781	Oryzias_latipes
ENSAMXG00000041082	-	97	31.387	ENSORLG00000023329	-	94	31.387	Oryzias_latipes
ENSAMXG00000041082	-	87	31.781	ENSORLG00000028630	-	97	31.781	Oryzias_latipes
ENSAMXG00000041082	-	97	39.546	ENSORLG00000023484	-	96	39.546	Oryzias_latipes
ENSAMXG00000041082	-	97	31.615	ENSORLG00000027297	-	94	31.615	Oryzias_latipes
ENSAMXG00000041082	-	65	45.154	ENSORLG00000025291	-	88	45.154	Oryzias_latipes
ENSAMXG00000041082	-	69	59.572	ENSORLG00000025169	-	94	59.572	Oryzias_latipes
ENSAMXG00000041082	-	96	44.356	ENSORLG00000022041	-	94	44.356	Oryzias_latipes
ENSAMXG00000041082	-	77	39.625	ENSORLG00000021791	-	99	39.625	Oryzias_latipes
ENSAMXG00000041082	-	95	32.094	ENSORLG00000029490	-	94	32.094	Oryzias_latipes
ENSAMXG00000041082	-	94	39.872	ENSORLG00020008265	-	98	38.839	Oryzias_latipes_hni
ENSAMXG00000041082	-	95	38.180	ENSORLG00020000502	-	97	38.201	Oryzias_latipes_hni
ENSAMXG00000041082	-	72	30.881	ENSORLG00020005152	-	98	30.881	Oryzias_latipes_hni
ENSAMXG00000041082	-	84	31.822	ENSORLG00020010381	-	92	31.822	Oryzias_latipes_hni
ENSAMXG00000041082	-	94	40.032	ENSORLG00020005861	-	98	39.065	Oryzias_latipes_hni
ENSAMXG00000041082	-	87	31.675	ENSORLG00020004233	-	93	31.675	Oryzias_latipes_hni
ENSAMXG00000041082	-	71	35.535	ENSORLG00020014275	-	92	35.535	Oryzias_latipes_hni
ENSAMXG00000041082	-	57	44.048	ENSORLG00020020421	-	99	44.048	Oryzias_latipes_hni
ENSAMXG00000041082	-	54	35.502	ENSORLG00020016480	-	89	35.502	Oryzias_latipes_hni
ENSAMXG00000041082	-	53	65.079	ENSORLG00015010653	-	93	65.079	Oryzias_latipes_hsok
ENSAMXG00000041082	-	53	35.725	ENSORLG00015004212	-	98	35.725	Oryzias_latipes_hsok
ENSAMXG00000041082	-	94	39.058	ENSORLG00015009567	-	92	39.058	Oryzias_latipes_hsok
ENSAMXG00000041082	-	54	35.593	ENSORLG00015017638	-	89	35.593	Oryzias_latipes_hsok
ENSAMXG00000041082	-	63	40.754	ENSORLG00015008822	-	94	40.754	Oryzias_latipes_hsok
ENSAMXG00000041082	-	100	56.624	ENSORLG00015011725	-	97	56.624	Oryzias_latipes_hsok
ENSAMXG00000041082	-	100	55.867	ENSOMEG00000015349	-	97	55.867	Oryzias_melastigma
ENSAMXG00000041082	-	82	35.741	ENSPKIG00000014677	-	94	35.741	Paramormyrops_kingsleyae