EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041112 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3474 bases
Position: chr25:18154377-18157850
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050330	zf-CCHC	PF00098.23	0.00064	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031772	-	3474	-	ENSAMXP00000050330	1157 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041112	-	91	52.464	ENSAMXG00000040892	-	71	51.621
ENSAMXG00000041112	-	99	47.742	ENSAMXG00000030902	-	77	47.742
ENSAMXG00000041112	-	78	55.422	ENSAMXG00000038578	-	66	55.422
ENSAMXG00000041112	-	99	54.902	ENSAMXG00000031698	-	71	54.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041112	-	67	33.415	ENSAPOG00000013711	-	92	33.585	Acanthochromis_polyacanthus
ENSAMXG00000041112	-	66	33.585	ENSAPOG00000013817	-	99	33.585	Acanthochromis_polyacanthus
ENSAMXG00000041112	-	99	47.870	ENSACLG00000014870	-	70	47.866	Astatotilapia_calliptera
ENSAMXG00000041112	-	99	46.447	ENSACLG00000013572	-	71	46.447	Astatotilapia_calliptera
ENSAMXG00000041112	-	96	49.545	ENSACLG00000018060	-	68	49.545	Astatotilapia_calliptera
ENSAMXG00000041112	-	83	31.854	ENSACLG00000025719	-	63	31.854	Astatotilapia_calliptera
ENSAMXG00000041112	-	82	32.427	ENSACLG00000026879	-	63	32.060	Astatotilapia_calliptera
ENSAMXG00000041112	-	83	31.953	ENSACLG00000009628	-	63	31.953	Astatotilapia_calliptera
ENSAMXG00000041112	-	82	32.729	ENSACLG00000017161	-	55	34.083	Astatotilapia_calliptera
ENSAMXG00000041112	-	99	39.026	ENSACLG00000002180	-	70	39.334	Astatotilapia_calliptera
ENSAMXG00000041112	-	99	48.936	ENSACLG00000027291	-	70	49.280	Astatotilapia_calliptera
ENSAMXG00000041112	-	99	47.870	ENSACLG00000017808	-	70	47.866	Astatotilapia_calliptera
ENSAMXG00000041112	-	99	47.786	ENSACLG00000000499	-	70	47.782	Astatotilapia_calliptera
ENSAMXG00000041112	-	83	31.755	ENSACLG00000024091	-	63	31.755	Astatotilapia_calliptera
ENSAMXG00000041112	-	58	53.890	ENSELUG00000000948	-	58	53.890	Esox_lucius
ENSAMXG00000041112	-	73	31.027	ENSFHEG00000000971	-	73	31.027	Fundulus_heteroclitus
ENSAMXG00000041112	-	76	42.763	ENSMAMG00000012310	-	99	42.763	Mastacembelus_armatus
ENSAMXG00000041112	-	56	49.548	ENSMAMG00000018393	-	60	49.548	Mastacembelus_armatus
ENSAMXG00000041112	-	53	53.784	ENSMZEG00005000633	-	57	53.784	Maylandia_zebra
ENSAMXG00000041112	-	74	32.058	ENSORLG00000024220	-	55	32.167	Oryzias_latipes
ENSAMXG00000041112	-	99	48.881	ENSORLG00000029675	-	70	49.355	Oryzias_latipes
ENSAMXG00000041112	-	81	32.118	ENSORLG00000028795	-	55	33.672	Oryzias_latipes
ENSAMXG00000041112	-	84	30.891	ENSORLG00000026665	-	56	32.393	Oryzias_latipes
ENSAMXG00000041112	-	84	31.574	ENSORLG00000024233	-	56	33.148	Oryzias_latipes
ENSAMXG00000041112	-	74	32.196	ENSORLG00000027568	-	55	31.968	Oryzias_latipes
ENSAMXG00000041112	-	74	31.891	ENSORLG00000030265	-	55	31.891	Oryzias_latipes
ENSAMXG00000041112	-	99	48.785	ENSORLG00000026873	-	70	48.667	Oryzias_latipes
ENSAMXG00000041112	-	74	32.426	ENSORLG00000025739	-	55	32.426	Oryzias_latipes
ENSAMXG00000041112	-	99	48.438	ENSORLG00000026629	-	70	48.323	Oryzias_latipes
ENSAMXG00000041112	-	81	32.016	ENSORLG00000022369	-	59	33.559	Oryzias_latipes
ENSAMXG00000041112	-	50	52.852	ENSORLG00000028632	-	54	52.852	Oryzias_latipes
ENSAMXG00000041112	-	99	48.841	ENSORLG00000029874	-	71	49.314	Oryzias_latipes
ENSAMXG00000041112	-	81	31.915	ENSORLG00000028609	-	55	33.446	Oryzias_latipes
ENSAMXG00000041112	-	74	33.037	ENSORLG00000026546	-	56	33.037	Oryzias_latipes
ENSAMXG00000041112	-	77	30.162	ENSORLG00000024904	-	56	30.752	Oryzias_latipes
ENSAMXG00000041112	-	81	31.915	ENSORLG00000030542	-	55	33.446	Oryzias_latipes
ENSAMXG00000041112	-	99	48.611	ENSORLG00000023181	-	70	48.495	Oryzias_latipes
ENSAMXG00000041112	-	74	31.891	ENSORLG00020008293	-	55	31.891	Oryzias_latipes_hni
ENSAMXG00000041112	-	77	30.054	ENSORLG00020020268	-	56	30.638	Oryzias_latipes_hni
ENSAMXG00000041112	-	77	30.054	ENSORLG00020014203	-	55	30.638	Oryzias_latipes_hni
ENSAMXG00000041112	-	77	30.054	ENSORLG00020003869	-	55	30.638	Oryzias_latipes_hni
ENSAMXG00000041112	-	81	31.814	ENSORLG00015017778	-	55	33.333	Oryzias_latipes_hsok
ENSAMXG00000041112	-	81	32.016	ENSORLG00015018878	-	55	33.559	Oryzias_latipes_hsok
ENSAMXG00000041112	-	95	49.465	ENSOMEG00000009987	-	69	49.418	Oryzias_melastigma
ENSAMXG00000041112	-	78	33.682	ENSOMEG00000003712	-	55	34.529	Oryzias_melastigma
ENSAMXG00000041112	-	66	38.272	ENSPSIG00000000994	-	55	38.272	Pelodiscus_sinensis
ENSAMXG00000041112	-	62	30.378	ENSPMEG00000016355	-	60	30.469	Poecilia_mexicana
ENSAMXG00000041112	-	99	44.219	ENSPREG00000000390	-	70	44.510	Poecilia_reticulata
ENSAMXG00000041112	-	94	45.126	ENSPREG00000004954	-	70	43.997	Poecilia_reticulata
ENSAMXG00000041112	-	65	32.759	ENSSDUG00000002460	-	60	32.759	Seriola_dumerili
ENSAMXG00000041112	-	70	33.371	ENSSLDG00000004385	-	83	32.907	Seriola_lalandi_dorsalis
ENSAMXG00000041112	-	99	38.298	ENSXMAG00000026594	-	69	38.298	Xiphophorus_maculatus
ENSAMXG00000041112	-	98	49.614	ENSXMAG00000021298	-	70	49.614	Xiphophorus_maculatus
ENSAMXG00000041112	-	99	38.136	ENSXMAG00000023079	-	70	38.220	Xiphophorus_maculatus
ENSAMXG00000041112	-	98	49.615	ENSXMAG00000023319	-	70	49.615	Xiphophorus_maculatus
ENSAMXG00000041112	-	74	31.111	ENSXMAG00000026031	-	56	31.111	Xiphophorus_maculatus
ENSAMXG00000041112	-	53	42.857	ENSXMAG00000030089	-	56	42.857	Xiphophorus_maculatus
ENSAMXG00000041112	-	82	30.404	ENSXMAG00000030100	-	60	31.222	Xiphophorus_maculatus
ENSAMXG00000041112	-	99	38.136	ENSXMAG00000023503	-	70	38.220	Xiphophorus_maculatus
ENSAMXG00000041112	-	99	38.383	ENSXMAG00000021213	-	69	38.383	Xiphophorus_maculatus