EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041465 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2405 bases
Position: chrAPWO02000985.1:52695-55099
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039516	RVT_1	PF00078.27	9.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030011	-	2405	-	ENSAMXP00000039516	733 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041465	-	62	58.150	ENSAMXG00000043821	-	59	58.150
ENSAMXG00000041465	-	52	34.908	ENSAMXG00000035893	-	56	34.908
ENSAMXG00000041465	-	59	32.653	ENSAMXG00000038502	-	84	32.653
ENSAMXG00000041465	-	50	34.286	ENSAMXG00000033786	-	60	34.286
ENSAMXG00000041465	-	54	31.818	ENSAMXG00000031032	-	97	31.818
ENSAMXG00000041465	-	83	38.149	ENSAMXG00000043631	-	72	38.149
ENSAMXG00000041465	-	61	36.161	ENSAMXG00000037637	-	69	36.161
ENSAMXG00000041465	-	99	58.880	ENSAMXG00000030908	-	59	58.880
ENSAMXG00000041465	-	57	44.706	ENSAMXG00000038480	-	59	44.706
ENSAMXG00000041465	-	92	61.652	ENSAMXG00000042777	-	88	61.652
ENSAMXG00000041465	-	69	42.218	ENSAMXG00000030761	-	67	42.218
ENSAMXG00000041465	-	66	32.794	ENSAMXG00000040471	-	70	32.794
ENSAMXG00000041465	-	54	31.328	ENSAMXG00000039106	-	72	31.328
ENSAMXG00000041465	-	83	39.706	ENSAMXG00000039473	-	52	39.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041465	-	52	33.770	ENSAPOG00000008925	-	98	33.770	Acanthochromis_polyacanthus
ENSAMXG00000041465	-	98	58.921	ENSAPOG00000015320	-	62	58.921	Acanthochromis_polyacanthus
ENSAMXG00000041465	-	54	35.101	ENSAOCG00000003030	-	50	35.101	Amphiprion_ocellaris
ENSAMXG00000041465	-	87	39.164	ENSAPEG00000002572	-	63	39.164	Amphiprion_percula
ENSAMXG00000041465	-	66	43.532	ENSAPEG00000006765	-	74	43.532	Amphiprion_percula
ENSAMXG00000041465	-	59	37.063	ENSACLG00000020385	-	74	37.061	Astatotilapia_calliptera
ENSAMXG00000041465	-	82	36.678	ENSACLG00000005847	-	78	36.678	Astatotilapia_calliptera
ENSAMXG00000041465	-	53	30.380	ENSACLG00000007712	-	63	30.380	Astatotilapia_calliptera
ENSAMXG00000041465	-	86	38.208	ENSACLG00000014688	-	50	38.208	Astatotilapia_calliptera
ENSAMXG00000041465	-	78	32.821	ENSACLG00000012278	-	73	32.821	Astatotilapia_calliptera
ENSAMXG00000041465	-	68	35.189	ENSACLG00000014740	-	56	35.189	Astatotilapia_calliptera
ENSAMXG00000041465	-	88	61.385	ENSACLG00000005526	-	77	61.385	Astatotilapia_calliptera
ENSAMXG00000041465	-	65	30.372	ENSACLG00000001380	-	77	30.372	Astatotilapia_calliptera
ENSAMXG00000041465	-	58	58.685	ENSACLG00000021355	-	50	58.685	Astatotilapia_calliptera
ENSAMXG00000041465	-	68	35.882	ENSCPBG00000001369	-	85	35.882	Chrysemys_picta_bellii
ENSAMXG00000041465	-	55	33.985	ENSCPBG00000001119	-	83	34.474	Chrysemys_picta_bellii
ENSAMXG00000041465	-	74	30.909	ENSCSEG00000010442	-	51	30.909	Cynoglossus_semilaevis
ENSAMXG00000041465	-	66	31.548	ENSCVAG00000019870	-	62	31.548	Cyprinodon_variegatus
ENSAMXG00000041465	-	79	31.134	ENSGAGG00000022002	-	67	31.134	Gopherus_agassizii
ENSAMXG00000041465	-	66	30.691	ENSGAGG00000011063	-	95	30.691	Gopherus_agassizii
ENSAMXG00000041465	-	73	32.110	ENSGAGG00000007173	-	81	32.110	Gopherus_agassizii
ENSAMXG00000041465	-	68	36.686	ENSGAGG00000013650	-	85	36.686	Gopherus_agassizii
ENSAMXG00000041465	-	59	34.932	ENSGAGG00000007552	-	64	34.932	Gopherus_agassizii
ENSAMXG00000041465	-	69	35.098	ENSGAGG00000002613	-	64	35.098	Gopherus_agassizii
ENSAMXG00000041465	-	53	32.658	ENSHBUG00000009088	-	100	32.658	Haplochromis_burtoni
ENSAMXG00000041465	-	60	32.506	ENSHCOG00000019997	-	73	32.506	Hippocampus_comes
ENSAMXG00000041465	-	61	30.435	ENSIPUG00000003645	-	88	30.435	Ictalurus_punctatus
ENSAMXG00000041465	-	53	32.653	ENSKMAG00000007574	-	71	32.653	Kryptolebias_marmoratus
ENSAMXG00000041465	-	62	32.684	ENSKMAG00000013568	-	55	32.684	Kryptolebias_marmoratus
ENSAMXG00000041465	-	53	32.824	ENSLBEG00000003912	-	94	32.824	Labrus_bergylta
ENSAMXG00000041465	-	52	37.984	ENSLACG00000012109	-	62	37.984	Latimeria_chalumnae
ENSAMXG00000041465	-	57	45.261	ENSLACG00000008450	-	54	45.261	Latimeria_chalumnae
ENSAMXG00000041465	-	68	34.524	ENSLACG00000006151	-	58	35.897	Latimeria_chalumnae
ENSAMXG00000041465	-	59	32.574	ENSLACG00000015201	-	70	32.574	Latimeria_chalumnae
ENSAMXG00000041465	-	58	61.647	ENSLACG00000006413	-	58	61.647	Latimeria_chalumnae
ENSAMXG00000041465	-	63	36.638	ENSLACG00000003991	-	50	36.638	Latimeria_chalumnae
ENSAMXG00000041465	-	98	53.571	ENSLACG00000005710	-	54	53.571	Latimeria_chalumnae
ENSAMXG00000041465	-	54	34.010	ENSLACG00000009347	-	60	34.010	Latimeria_chalumnae
ENSAMXG00000041465	-	66	31.653	ENSMAMG00000019918	-	75	31.653	Mastacembelus_armatus
ENSAMXG00000041465	-	65	43.606	ENSMAMG00000016004	-	70	43.606	Mastacembelus_armatus
ENSAMXG00000041465	-	54	30.348	ENSMZEG00005023829	-	75	30.348	Maylandia_zebra
ENSAMXG00000041465	-	97	58.194	ENSMZEG00005004899	-	87	58.194	Maylandia_zebra
ENSAMXG00000041465	-	67	42.540	ENSMZEG00005017878	-	75	42.540	Maylandia_zebra
ENSAMXG00000041465	-	65	38.784	ENSMZEG00005008378	-	63	38.683	Maylandia_zebra
ENSAMXG00000041465	-	77	32.327	ENSMZEG00005024252	-	59	32.327	Maylandia_zebra
ENSAMXG00000041465	-	97	60.420	ENSMZEG00005025542	-	53	60.420	Maylandia_zebra
ENSAMXG00000041465	-	50	32.880	ENSNBRG00000002477	-	99	32.880	Neolamprologus_brichardi
ENSAMXG00000041465	-	70	30.320	ENSORLG00000026235	-	52	30.320	Oryzias_latipes
ENSAMXG00000041465	-	81	39.374	ENSORLG00000025397	-	57	39.374	Oryzias_latipes
ENSAMXG00000041465	-	86	38.328	ENSORLG00000024878	-	62	38.328	Oryzias_latipes
ENSAMXG00000041465	-	62	30.968	ENSORLG00000027231	-	83	30.968	Oryzias_latipes
ENSAMXG00000041465	-	57	33.953	ENSORLG00020016924	-	95	33.953	Oryzias_latipes_hni
ENSAMXG00000041465	-	56	38.875	ENSORLG00020016695	-	51	38.875	Oryzias_latipes_hni
ENSAMXG00000041465	-	57	30.913	ENSORLG00020000154	-	95	30.913	Oryzias_latipes_hni
ENSAMXG00000041465	-	61	33.333	ENSORLG00020019030	-	51	33.333	Oryzias_latipes_hni
ENSAMXG00000041465	-	63	35.714	ENSORLG00020001433	-	60	35.532	Oryzias_latipes_hni
ENSAMXG00000041465	-	85	38.811	ENSORLG00020007648	-	50	38.801	Oryzias_latipes_hni
ENSAMXG00000041465	-	57	33.721	ENSORLG00020009084	-	54	33.721	Oryzias_latipes_hni
ENSAMXG00000041465	-	65	30.675	ENSORLG00020002002	-	71	30.675	Oryzias_latipes_hni
ENSAMXG00000041465	-	65	30.675	ENSORLG00015022314	-	53	30.675	Oryzias_latipes_hsok
ENSAMXG00000041465	-	55	32.593	ENSORLG00015021822	-	99	32.593	Oryzias_latipes_hsok
ENSAMXG00000041465	-	57	37.530	ENSORLG00015013109	-	63	37.530	Oryzias_latipes_hsok
ENSAMXG00000041465	-	65	32.515	ENSORLG00015008138	-	86	32.515	Oryzias_latipes_hsok
ENSAMXG00000041465	-	85	38.811	ENSORLG00015012565	-	54	38.801	Oryzias_latipes_hsok
ENSAMXG00000041465	-	85	35.368	ENSORLG00015017494	-	50	35.368	Oryzias_latipes_hsok
ENSAMXG00000041465	-	70	32.061	ENSORLG00015013369	-	64	32.061	Oryzias_latipes_hsok
ENSAMXG00000041465	-	57	39.192	ENSOMEG00000013479	-	64	39.192	Oryzias_melastigma
ENSAMXG00000041465	-	74	31.522	ENSOMEG00000005634	-	71	31.522	Oryzias_melastigma
ENSAMXG00000041465	-	55	31.343	ENSOMEG00000013437	-	64	31.343	Oryzias_melastigma
ENSAMXG00000041465	-	62	38.877	ENSPKIG00000012990	-	67	39.741	Paramormyrops_kingsleyae
ENSAMXG00000041465	-	99	58.483	ENSPKIG00000012188	-	51	58.483	Paramormyrops_kingsleyae
ENSAMXG00000041465	-	64	31.328	ENSPKIG00000013778	-	60	30.943	Paramormyrops_kingsleyae
ENSAMXG00000041465	-	58	33.953	ENSPKIG00000007140	-	92	33.953	Paramormyrops_kingsleyae
ENSAMXG00000041465	-	63	31.915	ENSPKIG00000015048	-	63	31.915	Paramormyrops_kingsleyae
ENSAMXG00000041465	-	66	32.025	ENSPSIG00000001150	-	61	32.025	Pelodiscus_sinensis
ENSAMXG00000041465	-	59	33.256	ENSPSIG00000001800	-	90	33.256	Pelodiscus_sinensis
ENSAMXG00000041465	-	66	34.639	ENSPSIG00000001614	-	66	34.639	Pelodiscus_sinensis
ENSAMXG00000041465	-	58	37.116	ENSPSIG00000001197	-	97	37.116	Pelodiscus_sinensis
ENSAMXG00000041465	-	54	33.250	ENSPSIG00000000007	-	93	33.250	Pelodiscus_sinensis
ENSAMXG00000041465	-	51	33.333	ENSPSIG00000001249	-	99	33.333	Pelodiscus_sinensis
ENSAMXG00000041465	-	58	38.443	ENSPSIG00000000193	-	79	38.443	Pelodiscus_sinensis
ENSAMXG00000041465	-	58	31.850	ENSPSIG00000000367	-	90	31.850	Pelodiscus_sinensis
ENSAMXG00000041465	-	65	42.500	ENSPSIG00000000226	-	87	42.443	Pelodiscus_sinensis
ENSAMXG00000041465	-	59	35.185	ENSPSIG00000001757	-	99	35.185	Pelodiscus_sinensis
ENSAMXG00000041465	-	59	37.300	ENSPSIG00000001205	-	87	37.300	Pelodiscus_sinensis
ENSAMXG00000041465	-	62	35.774	ENSPREG00000006122	-	59	35.774	Poecilia_reticulata
ENSAMXG00000041465	-	54	44.472	ENSPREG00000006496	-	52	44.472	Poecilia_reticulata
ENSAMXG00000041465	-	50	30.623	ENSPREG00000022349	-	72	30.623	Poecilia_reticulata
ENSAMXG00000041465	-	83	38.436	ENSPNAG00000009767	-	59	38.436	Pygocentrus_nattereri
ENSAMXG00000041465	-	59	31.746	ENSPNAG00000010299	-	81	31.746	Pygocentrus_nattereri
ENSAMXG00000041465	-	55	31.144	ENSPNAG00000009058	-	76	31.144	Pygocentrus_nattereri
ENSAMXG00000041465	-	71	41.667	ENSSFOG00015024061	-	86	41.667	Scleropages_formosus
ENSAMXG00000041465	-	55	30.882	ENSSPAG00000008169	-	61	30.882	Stegastes_partitus
ENSAMXG00000041465	-	59	30.947	ENSTRUG00000024803	-	77	30.947	Takifugu_rubripes
ENSAMXG00000041465	-	72	42.938	ENSXMAG00000024180	-	52	42.938	Xiphophorus_maculatus
ENSAMXG00000041465	-	81	33.170	ENSXMAG00000025551	-	52	33.170	Xiphophorus_maculatus
ENSAMXG00000041465	-	84	39.068	ENSXMAG00000029360	-	60	39.068	Xiphophorus_maculatus
ENSAMXG00000041465	-	79	40.171	ENSXMAG00000023370	-	51	40.171	Xiphophorus_maculatus
ENSAMXG00000041465	-	88	39.510	ENSXMAG00000022159	-	50	39.510	Xiphophorus_maculatus
ENSAMXG00000041465	-	51	32.891	ENSXMAG00000023507	-	68	32.891	Xiphophorus_maculatus