EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000041484 (Gene tree)
Gene ID: 103039531
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC103039531
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9273 bases
Position: chr14:26817140-26826412
Accession: 103039531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000051662	PABP	PF00658.18	7.4e-41	1	3
ENSAMXP00000051662	PABP	PF00658.18	7.4e-41	2	3
ENSAMXP00000051662	PABP	PF00658.18	7.4e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046915	-	4775	XM_007256595	ENSAMXP00000051662	226 (aa)	XP_007256657	UPI000440E746

Gene Model

Click here to download ENSAMXG00000041484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041484	-	95	58.333	ENSAPOG00000023881	-	99	58.333	Acanthochromis_polyacanthus
ENSAMXG00000041484	-	95	57.870	ENSAOCG00000019884	-	99	57.870	Amphiprion_ocellaris
ENSAMXG00000041484	-	95	58.796	ENSAPEG00000020987	-	99	58.796	Amphiprion_percula
ENSAMXG00000041484	-	95	56.561	ENSATEG00000013831	-	100	59.174	Anabas_testudineus
ENSAMXG00000041484	-	95	58.333	ENSACLG00000027916	-	99	57.604	Astatotilapia_calliptera
ENSAMXG00000041484	-	92	56.831	ENSCSEG00000001317	-	97	56.831	Cynoglossus_semilaevis
ENSAMXG00000041484	-	95	58.525	ENSCVAG00000000578	-	99	58.525	Cyprinodon_variegatus
ENSAMXG00000041484	-	95	56.422	ENSELUG00000001731	-	83	56.422	Esox_lucius
ENSAMXG00000041484	-	98	56.744	ENSFHEG00000007741	-	98	56.338	Fundulus_heteroclitus
ENSAMXG00000041484	-	91	49.727	ENSGAFG00000012983	-	66	49.727	Gambusia_affinis
ENSAMXG00000041484	-	96	56.682	ENSHBUG00000000185	-	60	53.394	Haplochromis_burtoni
ENSAMXG00000041484	-	92	56.019	ENSHCOG00000003117	-	99	56.019	Hippocampus_comes
ENSAMXG00000041484	-	93	57.277	ENSKMAG00000011397	-	98	57.277	Kryptolebias_marmoratus
ENSAMXG00000041484	-	93	60.563	ENSLBEG00000027847	-	94	60.563	Labrus_bergylta
ENSAMXG00000041484	-	90	56.154	ENSLOCG00000003085	-	98	53.165	Lepisosteus_oculatus
ENSAMXG00000041484	-	94	61.395	ENSMAMG00000017628	-	99	61.111	Mastacembelus_armatus
ENSAMXG00000041484	-	92	53.552	ENSMMOG00000004490	-	89	53.552	Mola_mola
ENSAMXG00000041484	-	93	57.746	ENSMALG00000004586	-	99	57.746	Monopterus_albus
ENSAMXG00000041484	-	96	56.771	ENSNBRG00000006752	-	79	53.061	Neolamprologus_brichardi
ENSAMXG00000041484	-	89	56.436	ENSPKIG00000005307	-	93	56.604	Paramormyrops_kingsleyae
ENSAMXG00000041484	-	90	56.906	ENSPMGG00000004590	-	96	56.906	Periophthalmus_magnuspinnatus
ENSAMXG00000041484	-	94	58.140	ENSPFOG00000023453	-	99	58.140	Poecilia_formosa
ENSAMXG00000041484	-	95	57.870	ENSPLAG00000003198	-	99	57.870	Poecilia_latipinna
ENSAMXG00000041484	-	91	54.190	ENSPMEG00000022008	-	69	54.190	Poecilia_mexicana
ENSAMXG00000041484	-	95	53.704	ENSPREG00000001981	-	97	53.704	Poecilia_reticulata
ENSAMXG00000041484	-	91	57.988	ENSPNYG00000004740	-	87	53.757	Pundamilia_nyererei
ENSAMXG00000041484	-	81	67.568	ENSPNAG00000018692	-	73	67.568	Pygocentrus_nattereri
ENSAMXG00000041484	-	95	59.070	ENSSFOG00015001322	-	95	59.070	Scleropages_formosus
ENSAMXG00000041484	-	94	58.411	ENSSMAG00000008778	-	99	58.140	Scophthalmus_maximus
ENSAMXG00000041484	-	95	59.259	ENSSDUG00000015116	-	99	58.716	Seriola_dumerili
ENSAMXG00000041484	-	95	58.796	ENSSLDG00000000425	-	99	58.257	Seriola_lalandi_dorsalis
ENSAMXG00000041484	-	95	60.185	ENSSPAG00000015141	-	99	60.185	Stegastes_partitus
ENSAMXG00000041484	-	95	56.164	ENSTRUG00000021899	-	99	56.164	Takifugu_rubripes
ENSAMXG00000041484	-	95	53.917	ENSTNIG00000002576	-	99	53.917	Tetraodon_nigroviridis
ENSAMXG00000041484	-	99	49.065	ENSXCOG00000001548	-	97	49.065	Xiphophorus_couchianus
ENSAMXG00000041484	-	95	57.870	ENSXMAG00000021863	-	99	57.870	Xiphophorus_maculatus