EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000041486 (Gene tree)
Gene ID: 103025015
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 17852 bases
Position: chrAPWO02000073.1:407937-425788
Accession: 103025015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050494	MA3	PF02847.17	9.6e-22	1	1
ENSAMXP00000050494	MIF4G	PF02854.19	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042681	-	5613	XM_022666689	ENSAMXP00000050494	864 (aa)	XP_022522410	UPI000BBDF6FC

Gene Model

Click here to download ENSAMXG00000041486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041486	nom1	63	63.752	ENSG00000146909	NOM1	61	65.649	Homo_sapiens
ENSAMXG00000041486	nom1	62	75.510	ENSAPOG00000012073	nom1	63	75.510	Acanthochromis_polyacanthus
ENSAMXG00000041486	nom1	81	55.478	ENSAMEG00000001412	NOM1	74	63.128	Ailuropoda_melanoleuca
ENSAMXG00000041486	nom1	83	76.471	ENSACIG00000018050	nom1	94	75.279	Amphilophus_citrinellus
ENSAMXG00000041486	nom1	62	74.721	ENSAOCG00000006229	nom1	63	74.721	Amphiprion_ocellaris
ENSAMXG00000041486	nom1	62	74.721	ENSAPEG00000015994	nom1	64	74.721	Amphiprion_percula
ENSAMXG00000041486	nom1	64	73.418	ENSATEG00000005405	nom1	64	75.142	Anabas_testudineus
ENSAMXG00000041486	nom1	78	56.515	ENSAPLG00000006585	NOM1	80	64.528	Anas_platyrhynchos
ENSAMXG00000041486	nom1	67	61.824	ENSACAG00000011192	NOM1	63	65.121	Anolis_carolinensis
ENSAMXG00000041486	nom1	61	75.094	ENSACLG00000000033	nom1	63	75.094	Astatotilapia_calliptera
ENSAMXG00000041486	nom1	98	50.699	ENSBTAG00000016435	NOM1	61	64.571	Bos_taurus
ENSAMXG00000041486	nom1	98	51.276	ENSCJAG00000004336	NOM1	60	65.134	Callithrix_jacchus
ENSAMXG00000041486	nom1	98	50.871	ENSCAFG00020005121	NOM1	62	63.060	Canis_lupus_dingo
ENSAMXG00000041486	nom1	81	56.436	ENSCHIG00000020102	NOM1	62	64.571	Capra_hircus
ENSAMXG00000041486	nom1	60	66.157	ENSCAPG00000016273	NOM1	99	66.411	Cavia_aperea
ENSAMXG00000041486	nom1	98	49.010	ENSCPOG00000025538	NOM1	85	61.494	Cavia_porcellus
ENSAMXG00000041486	nom1	81	55.540	ENSCLAG00000000267	NOM1	61	64.559	Chinchilla_lanigera
ENSAMXG00000041486	nom1	66	65.530	ENSCPBG00000018215	NOM1	78	65.530	Chrysemys_picta_bellii
ENSAMXG00000041486	nom1	85	36.412	ENSCING00000005248	-	70	40.114	Ciona_intestinalis
ENSAMXG00000041486	nom1	60	64.695	ENSCANG00000041984	NOM1	89	64.695	Colobus_angolensis_palliatus
ENSAMXG00000041486	nom1	60	64.491	ENSCGRG00000005405	Nom1	97	64.491	Cricetulus_griseus_crigri
ENSAMXG00000041486	nom1	94	57.561	ENSCSEG00000000932	nom1	61	73.992	Cynoglossus_semilaevis
ENSAMXG00000041486	nom1	98	59.485	ENSCVAG00000007562	nom1	64	74.953	Cyprinodon_variegatus
ENSAMXG00000041486	nom1	100	60.249	ENSDARG00000060027	nom1	100	77.254	Danio_rerio
ENSAMXG00000041486	nom1	60	54.924	ENSDORG00000015682	Nom1	76	54.735	Dipodomys_ordii
ENSAMXG00000041486	nom1	57	39.526	FBgn0035336	CG9004	60	39.417	Drosophila_melanogaster
ENSAMXG00000041486	nom1	55	58.491	ENSETEG00000003104	NOM1	73	55.425	Echinops_telfairi
ENSAMXG00000041486	nom1	50	50.682	ENSEBUG00000010077	nom1	96	50.572	Eptatretus_burgeri
ENSAMXG00000041486	nom1	65	63.298	ENSEASG00005001489	NOM1	61	65.905	Equus_asinus_asinus
ENSAMXG00000041486	nom1	63	64.000	ENSECAG00000007596	NOM1	57	64.925	Equus_caballus
ENSAMXG00000041486	nom1	63	72.909	ENSELUG00000006266	nom1	62	74.248	Esox_lucius
ENSAMXG00000041486	nom1	83	56.906	ENSFALG00000006904	NOM1	76	65.152	Ficedula_albicollis
ENSAMXG00000041486	nom1	86	55.086	ENSGALG00000006437	NOM1	61	64.962	Gallus_gallus
ENSAMXG00000041486	nom1	63	73.810	ENSGAFG00000003211	nom1	64	75.094	Gambusia_affinis
ENSAMXG00000041486	nom1	82	55.310	ENSGAGG00000014347	NOM1	62	65.909	Gopherus_agassizii
ENSAMXG00000041486	nom1	63	63.570	ENSGGOG00000010920	NOM1	56	65.458	Gorilla_gorilla
ENSAMXG00000041486	nom1	98	57.870	ENSHBUG00000014616	nom1	63	74.906	Haplochromis_burtoni
ENSAMXG00000041486	nom1	98	51.395	ENSHGLG00000007392	NOM1	60	64.943	Heterocephalus_glaber_female
ENSAMXG00000041486	nom1	86	65.176	ENSHGLG00100014407	NOM1	60	64.943	Heterocephalus_glaber_male
ENSAMXG00000041486	nom1	61	83.176	ENSIPUG00000013980	nom1	63	83.019	Ictalurus_punctatus
ENSAMXG00000041486	nom1	60	65.458	ENSSTOG00000031736	NOM1	91	65.709	Ictidomys_tridecemlineatus
ENSAMXG00000041486	nom1	57	65.849	ENSJJAG00000011716	Nom1	98	66.119	Jaculus_jaculus
ENSAMXG00000041486	nom1	61	74.291	ENSLBEG00000009252	nom1	62	74.151	Labrus_bergylta
ENSAMXG00000041486	nom1	83	60.888	ENSLACG00000011777	NOM1	64	68.105	Latimeria_chalumnae
ENSAMXG00000041486	nom1	98	58.499	ENSLOCG00000012452	nom1	67	73.371	Lepisosteus_oculatus
ENSAMXG00000041486	nom1	83	59.160	ENSLAFG00000007119	NOM1	84	59.160	Loxodonta_africana
ENSAMXG00000041486	nom1	63	59.239	ENSMMUG00000039033	NOM1	59	60.646	Macaca_mulatta
ENSAMXG00000041486	nom1	60	65.649	ENSMLEG00000037062	NOM1	98	65.649	Mandrillus_leucophaeus
ENSAMXG00000041486	nom1	64	71.403	ENSMAMG00000004118	nom1	63	73.535	Mastacembelus_armatus
ENSAMXG00000041486	nom1	61	74.906	ENSMZEG00005000384	nom1	63	74.906	Maylandia_zebra
ENSAMXG00000041486	nom1	63	62.842	ENSMICG00000017531	NOM1	62	64.952	Microcebus_murinus
ENSAMXG00000041486	nom1	62	68.909	ENSMMOG00000004419	nom1	65	68.909	Mola_mola
ENSAMXG00000041486	nom1	93	59.509	ENSMALG00000008800	nom1	62	75.918	Monopterus_albus
ENSAMXG00000041486	nom1	98	48.328	MGP_CAROLIEiJ_G0027043	Nom1	62	62.264	Mus_caroli
ENSAMXG00000041486	nom1	98	49.366	ENSMUSG00000001569	Nom1	62	62.453	Mus_musculus
ENSAMXG00000041486	nom1	98	48.106	MGP_SPRETEiJ_G0028039	Nom1	62	62.453	Mus_spretus
ENSAMXG00000041486	nom1	63	61.694	ENSMPUG00000009745	NOM1	76	63.238	Mustela_putorius_furo
ENSAMXG00000041486	nom1	70	60.229	ENSMLUG00000009129	NOM1	87	64.906	Myotis_lucifugus
ENSAMXG00000041486	nom1	65	73.118	ENSNBRG00000016429	nom1	95	74.717	Neolamprologus_brichardi
ENSAMXG00000041486	nom1	63	62.545	ENSNLEG00000000238	NOM1	60	64.449	Nomascus_leucogenys
ENSAMXG00000041486	nom1	51	67.286	ENSMEUG00000001108	NOM1	53	68.702	Notamacropus_eugenii
ENSAMXG00000041486	nom1	50	56.146	ENSOPRG00000014676	NOM1	51	56.146	Ochotona_princeps
ENSAMXG00000041486	nom1	81	56.180	ENSODEG00000009399	NOM1	74	64.751	Octodon_degus
ENSAMXG00000041486	nom1	61	75.283	ENSONIG00000005958	nom1	67	75.283	Oreochromis_niloticus
ENSAMXG00000041486	nom1	54	64.946	ENSOANG00000006139	-	97	64.946	Ornithorhynchus_anatinus
ENSAMXG00000041486	nom1	89	52.347	ENSOCUG00000021448	-	91	53.875	Oryctolagus_cuniculus
ENSAMXG00000041486	nom1	98	51.865	ENSOCUG00000004071	-	62	66.160	Oryctolagus_cuniculus
ENSAMXG00000041486	nom1	98	57.986	ENSORLG00000010541	nom1	64	73.774	Oryzias_latipes
ENSAMXG00000041486	nom1	83	64.575	ENSORLG00020010789	nom1	69	73.774	Oryzias_latipes_hni
ENSAMXG00000041486	nom1	98	58.451	ENSORLG00015010475	nom1	69	73.585	Oryzias_latipes_hsok
ENSAMXG00000041486	nom1	61	74.906	ENSOMEG00000004219	nom1	63	74.906	Oryzias_melastigma
ENSAMXG00000041486	nom1	67	61.197	ENSOGAG00000001124	NOM1	86	65.267	Otolemur_garnettii
ENSAMXG00000041486	nom1	81	55.446	ENSOARG00000007261	NOM1	70	63.810	Ovis_aries
ENSAMXG00000041486	nom1	98	51.320	ENSPPAG00000041374	NOM1	61	65.840	Pan_paniscus
ENSAMXG00000041486	nom1	98	51.320	ENSPTRG00000019917	NOM1	61	65.840	Pan_troglodytes
ENSAMXG00000041486	nom1	98	51.203	ENSPANG00000007605	NOM1	60	65.649	Papio_anubis
ENSAMXG00000041486	nom1	99	56.083	ENSPKIG00000005825	nom1	64	69.533	Paramormyrops_kingsleyae
ENSAMXG00000041486	nom1	66	62.435	ENSPSIG00000017848	NOM1	90	65.129	Pelodiscus_sinensis
ENSAMXG00000041486	nom1	98	58.167	ENSPMGG00000002577	nom1	65	74.157	Periophthalmus_magnuspinnatus
ENSAMXG00000041486	nom1	98	51.051	ENSPEMG00000024180	Nom1	60	64.875	Peromyscus_maniculatus_bairdii
ENSAMXG00000041486	nom1	98	51.124	ENSPCIG00000027941	NOM1	59	65.556	Phascolarctos_cinereus
ENSAMXG00000041486	nom1	61	75.141	ENSPFOG00000015771	nom1	63	75.141	Poecilia_formosa
ENSAMXG00000041486	nom1	86	74.765	ENSPMEG00000014155	nom1	63	74.765	Poecilia_mexicana
ENSAMXG00000041486	nom1	98	59.859	ENSPREG00000008850	nom1	64	74.393	Poecilia_reticulata
ENSAMXG00000041486	nom1	98	47.320	ENSPPYG00000018222	NOM1	59	59.542	Pongo_abelii
ENSAMXG00000041486	nom1	92	43.804	ENSPCAG00000000440	NOM1	80	61.072	Procavia_capensis
ENSAMXG00000041486	nom1	60	63.359	ENSPCOG00000015222	NOM1	98	63.359	Propithecus_coquereli
ENSAMXG00000041486	nom1	98	50.115	ENSPVAG00000014760	NOM1	63	61.878	Pteropus_vampyrus
ENSAMXG00000041486	nom1	63	73.616	ENSPNYG00000006975	nom1	97	73.840	Pundamilia_nyererei
ENSAMXG00000041486	nom1	63	85.348	ENSPNAG00000011085	nom1	61	86.085	Pygocentrus_nattereri
ENSAMXG00000041486	nom1	98	48.308	ENSRNOG00000048969	AABR07059041.1	64	61.036	Rattus_norvegicus
ENSAMXG00000041486	nom1	98	50.347	ENSRBIG00000037042	NOM1	62	64.673	Rhinopithecus_bieti
ENSAMXG00000041486	nom1	98	50.000	ENSRROG00000037293	NOM1	62	64.299	Rhinopithecus_roxellana
ENSAMXG00000041486	nom1	51	30.388	YLR336C	-	55	30.556	Saccharomyces_cerevisiae
ENSAMXG00000041486	nom1	66	63.158	ENSSHAG00000017998	-	76	67.176	Sarcophilus_harrisii
ENSAMXG00000041486	nom1	50	57.077	ENSSHAG00000002835	-	99	60.482	Sarcophilus_harrisii
ENSAMXG00000041486	nom1	56	73.006	ENSSFOG00015003196	nom1	100	73.006	Scleropages_formosus
ENSAMXG00000041486	nom1	98	58.864	ENSSMAG00000011047	nom1	62	75.094	Scophthalmus_maximus
ENSAMXG00000041486	nom1	63	74.908	ENSSDUG00000006834	nom1	63	75.465	Seriola_dumerili
ENSAMXG00000041486	nom1	61	75.849	ENSSLDG00000021812	nom1	64	74.907	Seriola_lalandi_dorsalis
ENSAMXG00000041486	nom1	87	46.354	ENSSPUG00000002556	NOM1	90	65.204	Sphenodon_punctatus
ENSAMXG00000041486	nom1	61	75.660	ENSSPAG00000000953	nom1	62	75.660	Stegastes_partitus
ENSAMXG00000041486	nom1	83	55.144	ENSTGUG00000000702	-	75	64.583	Taeniopygia_guttata
ENSAMXG00000041486	nom1	63	71.846	ENSTRUG00000010239	nom1	63	73.396	Takifugu_rubripes
ENSAMXG00000041486	nom1	98	56.512	ENSTNIG00000012783	nom1	68	71.963	Tetraodon_nigroviridis
ENSAMXG00000041486	nom1	80	55.524	ENSTTRG00000009691	NOM1	61	65.116	Tursiops_truncatus
ENSAMXG00000041486	nom1	63	63.139	ENSUAMG00000025450	NOM1	60	64.381	Ursus_americanus
ENSAMXG00000041486	nom1	81	55.618	ENSUMAG00000014275	NOM1	72	63.315	Ursus_maritimus
ENSAMXG00000041486	nom1	81	57.224	ENSVVUG00000002608	NOM1	59	66.920	Vulpes_vulpes
ENSAMXG00000041486	nom1	91	54.660	ENSXETG00000021611	nom1	82	72.816	Xenopus_tropicalis
ENSAMXG00000041486	nom1	63	73.626	ENSXMAG00000002451	nom1	64	74.906	Xiphophorus_maculatus