EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7239 bases
Position: chr2:7368473-7375711
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000053085	Transposase_22	PF02994.14	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052580	-	765	-	ENSAMXP00000053085	254 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041578	-	69	89.143	ENSAMXG00000038779	-	69	89.143
ENSAMXG00000041578	-	53	36.296	ENSAMXG00000038380	-	50	36.296
ENSAMXG00000041578	-	62	37.342	ENSAMXG00000036242	-	68	37.342
ENSAMXG00000041578	-	62	37.342	ENSAMXG00000038431	-	68	37.342
ENSAMXG00000041578	-	67	51.744	ENSAMXG00000038945	-	55	51.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041578	-	63	42.593	ENSKMAG00000015348	-	81	42.593	Kryptolebias_marmoratus
ENSAMXG00000041578	-	67	40.116	ENSKMAG00000001064	-	75	40.116	Kryptolebias_marmoratus
ENSAMXG00000041578	-	68	40.805	ENSKMAG00000003890	-	87	40.805	Kryptolebias_marmoratus
ENSAMXG00000041578	-	66	41.477	ENSKMAG00000010459	-	83	41.477	Kryptolebias_marmoratus
ENSAMXG00000041578	-	78	38.424	ENSPLAG00000016788	-	61	38.424	Poecilia_latipinna
ENSAMXG00000041578	-	59	84.000	ENSPNAG00000011528	-	66	84.000	Pygocentrus_nattereri
ENSAMXG00000041578	-	62	45.625	ENSPNAG00000001558	-	76	45.625	Pygocentrus_nattereri
ENSAMXG00000041578	-	75	46.073	ENSPNAG00000014260	-	70	46.073	Pygocentrus_nattereri
ENSAMXG00000041578	-	74	85.027	ENSPNAG00000018026	-	79	85.027	Pygocentrus_nattereri
ENSAMXG00000041578	-	66	44.048	ENSSDUG00000017942	-	76	44.048	Seriola_dumerili