EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3803 bases
Position: chr19:13299579-13303381
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000053385	RVT_1	PF00078.27	8.5e-42	1	1
ENSAMXP00000053385	Exo_endo_phos	PF03372.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000056440	-	3803	-	ENSAMXP00000053385	841 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041658	-	60	95.626	ENSAMXG00000029153	-	99	95.626
ENSAMXG00000041658	-	70	30.569	ENSAMXG00000039954	-	76	30.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041658	-	81	35.007	ENSCSAVG00000005792	-	78	34.900	Ciona_savignyi
ENSAMXG00000041658	-	95	43.650	ENSIPUG00000019854	-	81	43.650	Ictalurus_punctatus
ENSAMXG00000041658	-	92	46.341	ENSLACG00000014846	-	82	46.727	Latimeria_chalumnae
ENSAMXG00000041658	-	86	33.608	ENSLACG00000004055	-	99	33.745	Latimeria_chalumnae
ENSAMXG00000041658	-	85	30.727	ENSLACG00000011981	-	87	30.727	Latimeria_chalumnae