EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000041805 (Gene tree)
Gene ID: 103030445
Gene Symbol: zc3h3
Alias: fj68a07|wu:fj68a07
Full Name: zinc finger CCCH-type containing 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 102307 bases
Position: chr13:42382373-42484679
Accession: 103030445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037146	zf-CCCH	PF00642.24	4.9e-16	1	1
ENSAMXP00000034027	zf-CCCH	PF00642.24	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052678	-	6876	-	ENSAMXP00000034027	1004 (aa)	-	-
ENSAMXT00000038669	-	6829	XM_022675858	ENSAMXP00000037146	975 (aa)	XP_022531579	-

Gene Model

Click here to download ENSAMXG00000041805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041805	zc3h3	97	44.456	ENSAPOG00000011522	zc3h3	100	44.207	Acanthochromis_polyacanthus
ENSAMXG00000041805	zc3h3	72	49.517	ENSACIG00000005563	zc3h3	99	41.456	Amphilophus_citrinellus
ENSAMXG00000041805	zc3h3	96	43.406	ENSAOCG00000013763	zc3h3	98	45.344	Amphiprion_ocellaris
ENSAMXG00000041805	zc3h3	87	44.279	ENSAPEG00000020037	zc3h3	88	44.674	Amphiprion_percula
ENSAMXG00000041805	zc3h3	97	43.297	ENSATEG00000003718	zc3h3	100	42.442	Anabas_testudineus
ENSAMXG00000041805	zc3h3	97	44.365	ENSACLG00000023035	zc3h3	100	44.148	Astatotilapia_calliptera
ENSAMXG00000041805	zc3h3	50	43.689	ENSCCAG00000035267	ZC3H3	52	43.327	Cebus_capucinus
ENSAMXG00000041805	zc3h3	52	45.329	ENSCPBG00000019050	ZC3H3	58	43.080	Chrysemys_picta_bellii
ENSAMXG00000041805	zc3h3	79	49.417	ENSCSEG00000002583	zc3h3	94	49.927	Cynoglossus_semilaevis
ENSAMXG00000041805	zc3h3	97	51.287	ENSDARG00000090751	zc3h3	99	51.031	Danio_rerio
ENSAMXG00000041805	zc3h3	88	46.229	ENSELUG00000024269	zc3h3	81	46.463	Esox_lucius
ENSAMXG00000041805	zc3h3	97	33.491	ENSFALG00000009538	ZC3H3	86	34.886	Ficedula_albicollis
ENSAMXG00000041805	zc3h3	97	42.652	ENSFHEG00000017714	zc3h3	99	42.754	Fundulus_heteroclitus
ENSAMXG00000041805	zc3h3	97	42.610	ENSGAFG00000014360	zc3h3	99	42.127	Gambusia_affinis
ENSAMXG00000041805	zc3h3	97	44.365	ENSHBUG00000004627	zc3h3	100	44.148	Haplochromis_burtoni
ENSAMXG00000041805	zc3h3	95	39.099	ENSHCOG00000006579	zc3h3	99	39.327	Hippocampus_comes
ENSAMXG00000041805	zc3h3	97	60.688	ENSIPUG00000006438	zc3h3	100	59.896	Ictalurus_punctatus
ENSAMXG00000041805	zc3h3	97	42.945	ENSKMAG00000017876	zc3h3	100	43.207	Kryptolebias_marmoratus
ENSAMXG00000041805	zc3h3	98	40.287	ENSLOCG00000008621	ZC3H3	99	38.915	Lepisosteus_oculatus
ENSAMXG00000041805	zc3h3	97	44.659	ENSMAMG00000014787	zc3h3	100	44.207	Mastacembelus_armatus
ENSAMXG00000041805	zc3h3	97	44.264	ENSMZEG00005017290	zc3h3	100	44.045	Maylandia_zebra
ENSAMXG00000041805	zc3h3	97	42.045	ENSMMOG00000016823	zc3h3	100	41.942	Mola_mola
ENSAMXG00000041805	zc3h3	97	44.612	ENSMALG00000014610	zc3h3	100	44.020	Monopterus_albus
ENSAMXG00000041805	zc3h3	96	44.433	ENSNBRG00000005454	zc3h3	95	43.834	Neolamprologus_brichardi
ENSAMXG00000041805	zc3h3	73	47.718	ENSORLG00000026930	zc3h3	99	42.264	Oryzias_latipes
ENSAMXG00000041805	zc3h3	92	42.421	ENSORLG00020002734	zc3h3	99	42.754	Oryzias_latipes_hni
ENSAMXG00000041805	zc3h3	79	44.635	ENSORLG00015001257	zc3h3	99	41.979	Oryzias_latipes_hsok
ENSAMXG00000041805	zc3h3	65	43.485	ENSOMEG00000015369	zc3h3	99	37.552	Oryzias_melastigma
ENSAMXG00000041805	zc3h3	66	46.667	ENSPKIG00000002936	zc3h3	97	39.506	Paramormyrops_kingsleyae
ENSAMXG00000041805	zc3h3	96	43.577	ENSPFOG00000023405	zc3h3	98	43.151	Poecilia_formosa
ENSAMXG00000041805	zc3h3	97	43.865	ENSPLAG00000001686	zc3h3	99	43.545	Poecilia_latipinna
ENSAMXG00000041805	zc3h3	97	43.890	ENSPMEG00000002341	zc3h3	99	43.469	Poecilia_mexicana
ENSAMXG00000041805	zc3h3	67	50.808	ENSPREG00000008923	zc3h3	99	42.857	Poecilia_reticulata
ENSAMXG00000041805	zc3h3	97	44.467	ENSPNYG00000023105	zc3h3	100	44.251	Pundamilia_nyererei
ENSAMXG00000041805	zc3h3	97	67.782	ENSPNAG00000009850	zc3h3	100	68.096	Pygocentrus_nattereri
ENSAMXG00000041805	zc3h3	50	44.401	ENSSBOG00000021819	ZC3H3	53	43.520	Saimiri_boliviensis_boliviensis
ENSAMXG00000041805	zc3h3	70	50.140	ENSSFOG00015001784	zc3h3	95	32.577	Scleropages_formosus
ENSAMXG00000041805	zc3h3	75	50.220	ENSSMAG00000016302	zc3h3	80	50.220	Scophthalmus_maximus
ENSAMXG00000041805	zc3h3	97	44.755	ENSSDUG00000021871	zc3h3	99	44.578	Seriola_dumerili
ENSAMXG00000041805	zc3h3	97	44.510	ENSSLDG00000016166	zc3h3	100	43.818	Seriola_lalandi_dorsalis
ENSAMXG00000041805	zc3h3	67	53.092	ENSSPAG00000008518	zc3h3	100	44.207	Stegastes_partitus
ENSAMXG00000041805	zc3h3	59	48.496	ENSXETG00000004937	zc3h3	55	52.155	Xenopus_tropicalis
ENSAMXG00000041805	zc3h3	56	65.476	ENSXCOG00000005025	zc3h3	89	65.476	Xiphophorus_couchianus
ENSAMXG00000041805	zc3h3	67	50.746	ENSXMAG00000006422	zc3h3	99	42.312	Xiphophorus_maculatus