EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041896 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2109 bases
Position: chr3:9815041-9817149
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050871	RVT_1	PF00078.27	4.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040218	-	2109	-	ENSAMXP00000050871	702 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000041896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041896	-	97	43.593	ENSAMXG00000030022	-	58	43.593
ENSAMXG00000041896	-	79	40.260	ENSAMXG00000037673	-	64	40.260
ENSAMXG00000041896	-	97	51.760	ENSAMXG00000043385	-	50	51.760
ENSAMXG00000041896	-	79	41.916	ENSAMXG00000031305	-	56	41.916
ENSAMXG00000041896	-	97	46.647	ENSAMXG00000034382	-	58	46.647
ENSAMXG00000041896	-	97	51.912	ENSAMXG00000041114	-	71	51.912
ENSAMXG00000041896	-	97	36.773	ENSAMXG00000039114	-	63	36.773
ENSAMXG00000041896	-	69	39.341	ENSAMXG00000030761	-	67	39.341
ENSAMXG00000041896	-	97	52.577	ENSAMXG00000033197	-	90	52.577
ENSAMXG00000041896	-	97	44.600	ENSAMXG00000039110	-	51	44.600
ENSAMXG00000041896	-	97	43.040	ENSAMXG00000041369	-	58	43.040
ENSAMXG00000041896	-	97	42.402	ENSAMXG00000036113	-	68	42.402
ENSAMXG00000041896	-	84	38.871	ENSAMXG00000038480	-	86	38.871
ENSAMXG00000041896	-	76	40.575	ENSAMXG00000038310	-	58	40.575
ENSAMXG00000041896	-	97	45.586	ENSAMXG00000035923	-	85	45.586
ENSAMXG00000041896	-	72	30.859	ENSAMXG00000043469	-	95	30.859
ENSAMXG00000041896	-	97	37.069	ENSAMXG00000038033	-	72	37.069
ENSAMXG00000041896	-	78	41.509	ENSAMXG00000033786	-	83	41.509
ENSAMXG00000041896	-	97	45.362	ENSAMXG00000040885	-	51	45.362
ENSAMXG00000041896	-	97	42.340	ENSAMXG00000032783	-	52	42.340
ENSAMXG00000041896	-	97	53.285	ENSAMXG00000033912	-	53	53.285
ENSAMXG00000041896	-	82	54.895	ENSAMXG00000037864	-	51	54.895
ENSAMXG00000041896	-	57	37.870	ENSAMXG00000043892	-	50	37.017
ENSAMXG00000041896	-	97	37.069	ENSAMXG00000032559	-	60	37.069
ENSAMXG00000041896	-	75	39.936	ENSAMXG00000037157	-	60	39.936
ENSAMXG00000041896	-	97	40.027	ENSAMXG00000030908	-	61	40.027
ENSAMXG00000041896	-	92	39.714	ENSAMXG00000043821	-	93	39.828
ENSAMXG00000041896	-	90	42.814	ENSAMXG00000039473	-	59	42.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041896	-	82	36.859	ENSAPOG00000015320	-	56	36.859	Acanthochromis_polyacanthus
ENSAMXG00000041896	-	97	42.937	ENSAPEG00000002424	-	50	42.937	Amphiprion_percula
ENSAMXG00000041896	-	97	38.990	ENSAPEG00000015494	-	53	38.990	Amphiprion_percula
ENSAMXG00000041896	-	71	50.100	ENSAPEG00000002572	-	50	50.100	Amphiprion_percula
ENSAMXG00000041896	-	68	40.681	ENSAPEG00000006765	-	77	40.882	Amphiprion_percula
ENSAMXG00000041896	-	97	39.945	ENSATEG00000006997	-	77	39.945	Anabas_testudineus
ENSAMXG00000041896	-	97	38.484	ENSATEG00000016298	-	64	38.484	Anabas_testudineus
ENSAMXG00000041896	-	97	38.653	ENSATEG00000018698	-	57	38.653	Anabas_testudineus
ENSAMXG00000041896	-	96	30.422	ENSATEG00000019692	-	56	30.422	Anabas_testudineus
ENSAMXG00000041896	-	97	36.496	ENSACLG00000027627	-	53	36.496	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	44.413	ENSACLG00000015880	-	51	44.413	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	38.587	ENSACLG00000008010	-	64	38.587	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	38.976	ENSACLG00000002182	-	50	39.118	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	38.976	ENSACLG00000019658	-	50	39.118	Astatotilapia_calliptera
ENSAMXG00000041896	-	94	36.119	ENSACLG00000024556	-	75	36.119	Astatotilapia_calliptera
ENSAMXG00000041896	-	58	36.740	ENSACLG00000020385	-	66	36.740	Astatotilapia_calliptera
ENSAMXG00000041896	-	73	36.218	ENSACLG00000019989	-	56	36.656	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	44.993	ENSACLG00000005531	-	51	44.993	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	40.490	ENSACLG00000001267	-	60	40.490	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	39.776	ENSACLG00000018454	-	59	39.776	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	43.077	ENSACLG00000012657	-	62	43.077	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	44.348	ENSACLG00000013947	-	62	44.348	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	44.051	ENSACLG00000010542	-	53	44.051	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	43.077	ENSACLG00000000373	-	62	43.077	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	38.347	ENSACLG00000021355	-	88	38.347	Astatotilapia_calliptera
ENSAMXG00000041896	-	70	34.413	ENSACLG00000014740	-	52	34.413	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	42.382	ENSACLG00000001282	-	50	42.521	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	46.334	ENSACLG00000014688	-	54	46.334	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	39.829	ENSACLG00000024387	-	56	39.829	Astatotilapia_calliptera
ENSAMXG00000041896	-	72	36.031	ENSACLG00000012278	-	64	36.031	Astatotilapia_calliptera
ENSAMXG00000041896	-	91	43.129	ENSACLG00000018344	-	55	43.129	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	40.544	ENSACLG00000020048	-	50	40.544	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	34.352	ENSACLG00000016581	-	55	34.352	Astatotilapia_calliptera
ENSAMXG00000041896	-	54	33.924	ENSACLG00000009861	-	75	33.671	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	44.774	ENSACLG00000016624	-	50	44.774	Astatotilapia_calliptera
ENSAMXG00000041896	-	97	44.915	ENSACLG00000009118	-	50	44.915	Astatotilapia_calliptera
ENSAMXG00000041896	-	94	38.026	ENSACLG00000017258	-	67	38.026	Astatotilapia_calliptera
ENSAMXG00000041896	-	51	35.180	ENSCPBG00000001119	-	74	36.011	Chrysemys_picta_bellii
ENSAMXG00000041896	-	74	30.769	ENSCING00000023194	-	57	30.769	Ciona_intestinalis
ENSAMXG00000041896	-	66	33.007	ENSCING00000021231	-	61	33.007	Ciona_intestinalis
ENSAMXG00000041896	-	74	42.913	ENSCVAG00000020907	-	67	42.913	Cyprinodon_variegatus
ENSAMXG00000041896	-	97	39.485	ENSCVAG00000019395	-	51	39.485	Cyprinodon_variegatus
ENSAMXG00000041896	-	54	35.606	ENSCVAG00000001415	-	99	35.606	Cyprinodon_variegatus
ENSAMXG00000041896	-	97	42.420	ENSGAFG00000016352	-	55	42.698	Gambusia_affinis
ENSAMXG00000041896	-	94	38.405	ENSGAFG00000014674	-	64	38.405	Gambusia_affinis
ENSAMXG00000041896	-	57	41.250	ENSGAGG00000002613	-	52	41.250	Gopherus_agassizii
ENSAMXG00000041896	-	68	36.656	ENSHBUG00000016445	-	86	36.656	Haplochromis_burtoni
ENSAMXG00000041896	-	97	41.772	ENSHCOG00000012267	-	59	41.772	Hippocampus_comes
ENSAMXG00000041896	-	96	36.257	ENSKMAG00000022204	-	51	36.257	Kryptolebias_marmoratus
ENSAMXG00000041896	-	96	36.257	ENSKMAG00000010491	-	51	36.257	Kryptolebias_marmoratus
ENSAMXG00000041896	-	96	36.257	ENSKMAG00000003018	-	51	36.257	Kryptolebias_marmoratus
ENSAMXG00000041896	-	76	44.545	ENSLACG00000006413	-	76	44.545	Latimeria_chalumnae
ENSAMXG00000041896	-	73	33.559	ENSLACG00000004343	-	68	33.559	Latimeria_chalumnae
ENSAMXG00000041896	-	71	43.810	ENSLACG00000006151	-	66	43.810	Latimeria_chalumnae
ENSAMXG00000041896	-	82	38.245	ENSLACG00000007830	-	77	38.245	Latimeria_chalumnae
ENSAMXG00000041896	-	96	41.082	ENSLACG00000010043	-	74	41.082	Latimeria_chalumnae
ENSAMXG00000041896	-	69	31.273	ENSLACG00000016980	-	56	31.636	Latimeria_chalumnae
ENSAMXG00000041896	-	97	41.532	ENSLACG00000009524	-	70	41.874	Latimeria_chalumnae
ENSAMXG00000041896	-	67	37.190	ENSLACG00000007522	-	69	37.190	Latimeria_chalumnae
ENSAMXG00000041896	-	76	36.513	ENSLACG00000016441	-	71	36.513	Latimeria_chalumnae
ENSAMXG00000041896	-	61	32.245	ENSLACG00000002665	-	52	32.245	Latimeria_chalumnae
ENSAMXG00000041896	-	65	31.628	ENSLACG00000018380	-	76	30.412	Latimeria_chalumnae
ENSAMXG00000041896	-	66	41.102	ENSLACG00000009347	-	73	41.102	Latimeria_chalumnae
ENSAMXG00000041896	-	97	33.772	ENSLACG00000003991	-	70	33.772	Latimeria_chalumnae
ENSAMXG00000041896	-	69	30.526	ENSLACG00000008366	-	75	30.526	Latimeria_chalumnae
ENSAMXG00000041896	-	68	32.319	ENSLACG00000005007	-	73	32.319	Latimeria_chalumnae
ENSAMXG00000041896	-	96	40.843	ENSLACG00000008450	-	83	40.843	Latimeria_chalumnae
ENSAMXG00000041896	-	77	41.818	ENSLACG00000012109	-	88	41.818	Latimeria_chalumnae
ENSAMXG00000041896	-	70	32.319	ENSLOCG00000009957	-	56	32.319	Lepisosteus_oculatus
ENSAMXG00000041896	-	97	37.956	ENSMAMG00000021634	-	94	37.956	Mastacembelus_armatus
ENSAMXG00000041896	-	72	35.409	ENSMAMG00000004646	-	99	35.409	Mastacembelus_armatus
ENSAMXG00000041896	-	71	42.264	ENSMAMG00000016004	-	77	42.453	Mastacembelus_armatus
ENSAMXG00000041896	-	58	41.203	ENSMZEG00005017878	-	71	40.860	Maylandia_zebra
ENSAMXG00000041896	-	54	32.992	ENSMZEG00005023829	-	74	32.737	Maylandia_zebra
ENSAMXG00000041896	-	67	36.786	ENSMZEG00005008378	-	58	36.998	Maylandia_zebra
ENSAMXG00000041896	-	95	33.529	ENSMZEG00005024252	-	71	33.529	Maylandia_zebra
ENSAMXG00000041896	-	97	39.261	ENSMZEG00005025542	-	55	39.261	Maylandia_zebra
ENSAMXG00000041896	-	82	40.879	ENSMZEG00005023862	-	55	40.879	Maylandia_zebra
ENSAMXG00000041896	-	97	42.818	ENSMALG00000020759	-	53	42.956	Monopterus_albus
ENSAMXG00000041896	-	91	42.751	ENSORLG00000024878	-	68	42.751	Oryzias_latipes
ENSAMXG00000041896	-	97	39.349	ENSORLG00000028175	-	50	39.349	Oryzias_latipes
ENSAMXG00000041896	-	97	43.847	ENSORLG00000025268	-	85	43.847	Oryzias_latipes
ENSAMXG00000041896	-	97	52.123	ENSORLG00000025397	-	65	52.123	Oryzias_latipes
ENSAMXG00000041896	-	50	33.239	ENSORLG00000027231	-	65	33.239	Oryzias_latipes
ENSAMXG00000041896	-	97	44.051	ENSORLG00000029184	-	87	44.051	Oryzias_latipes
ENSAMXG00000041896	-	97	39.398	ENSORLG00000027307	-	59	39.398	Oryzias_latipes
ENSAMXG00000041896	-	97	39.683	ENSORLG00000025132	-	53	39.683	Oryzias_latipes
ENSAMXG00000041896	-	97	37.881	ENSORLG00000023550	-	52	37.881	Oryzias_latipes
ENSAMXG00000041896	-	97	72.754	ENSORLG00000028051	-	50	72.754	Oryzias_latipes
ENSAMXG00000041896	-	58	48.537	ENSORLG00000022742	-	100	48.537	Oryzias_latipes
ENSAMXG00000041896	-	97	41.499	ENSORLG00000027117	-	50	41.499	Oryzias_latipes
ENSAMXG00000041896	-	97	45.361	ENSORLG00020007648	-	54	45.361	Oryzias_latipes_hni
ENSAMXG00000041896	-	94	72.440	ENSORLG00020018561	-	70	72.440	Oryzias_latipes_hni
ENSAMXG00000041896	-	61	46.963	ENSORLG00020004454	-	99	46.963	Oryzias_latipes_hni
ENSAMXG00000041896	-	97	42.837	ENSORLG00020017608	-	65	42.837	Oryzias_latipes_hni
ENSAMXG00000041896	-	97	52.206	ENSORLG00020000868	-	52	52.206	Oryzias_latipes_hni
ENSAMXG00000041896	-	97	44.934	ENSORLG00020016398	-	51	44.934	Oryzias_latipes_hni
ENSAMXG00000041896	-	96	36.364	ENSORLG00020016001	-	50	36.364	Oryzias_latipes_hni
ENSAMXG00000041896	-	96	32.456	ENSORLG00020009084	-	82	32.456	Oryzias_latipes_hni
ENSAMXG00000041896	-	97	35.965	ENSORLG00020016695	-	86	35.965	Oryzias_latipes_hni
ENSAMXG00000041896	-	97	40.837	ENSORLG00020015203	-	62	40.404	Oryzias_latipes_hni
ENSAMXG00000041896	-	97	37.881	ENSORLG00015008388	-	68	37.881	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	42.069	ENSORLG00015000379	-	93	42.069	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	45.455	ENSORLG00015022011	-	58	45.455	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	45.214	ENSORLG00015012565	-	59	45.214	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	36.164	ENSORLG00015000130	-	57	36.164	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	67.699	ENSORLG00015010457	-	52	67.699	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	51.689	ENSORLG00015001207	-	53	51.689	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	30.479	ENSORLG00015003846	-	63	30.479	Oryzias_latipes_hsok
ENSAMXG00000041896	-	84	42.727	ENSORLG00015022127	-	77	42.727	Oryzias_latipes_hsok
ENSAMXG00000041896	-	77	34.539	ENSORLG00015013109	-	83	34.539	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	40.232	ENSORLG00015017494	-	55	40.232	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	38.988	ENSORLG00015018293	-	59	38.988	Oryzias_latipes_hsok
ENSAMXG00000041896	-	97	42.672	ENSOMEG00000001995	-	57	42.672	Oryzias_melastigma
ENSAMXG00000041896	-	89	42.249	ENSOMEG00000000573	-	58	42.249	Oryzias_melastigma
ENSAMXG00000041896	-	97	45.374	ENSOMEG00000012600	-	76	45.374	Oryzias_melastigma
ENSAMXG00000041896	-	76	30.616	ENSOMEG00000005634	-	63	30.616	Oryzias_melastigma
ENSAMXG00000041896	-	78	36.898	ENSOMEG00000013479	-	83	36.898	Oryzias_melastigma
ENSAMXG00000041896	-	94	37.164	ENSPKIG00000021090	-	69	37.164	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	63	40.351	ENSPKIG00000004057	-	100	40.351	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	96	34.700	ENSPKIG00000006120	-	72	34.700	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	97	38.646	ENSPKIG00000013624	-	58	38.646	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	97	45.007	ENSPKIG00000007924	-	71	45.007	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	83	37.294	ENSPKIG00000012990	-	85	37.294	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	96	31.014	ENSPKIG00000006845	-	62	31.014	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	72	39.130	ENSPKIG00000003982	-	100	39.130	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	97	46.981	ENSPKIG00000020388	-	51	46.981	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	97	38.451	ENSPKIG00000012188	-	53	38.451	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	97	39.205	ENSPKIG00000020363	-	57	39.205	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	96	34.928	ENSPKIG00000013293	-	59	34.928	Paramormyrops_kingsleyae
ENSAMXG00000041896	-	54	40.789	ENSPSIG00000001614	-	53	40.789	Pelodiscus_sinensis
ENSAMXG00000041896	-	97	52.353	ENSPMEG00000023031	-	60	52.353	Poecilia_mexicana
ENSAMXG00000041896	-	97	40.693	ENSPMEG00000008618	-	56	40.693	Poecilia_mexicana
ENSAMXG00000041896	-	97	72.312	ENSPREG00000006052	-	62	72.312	Poecilia_reticulata
ENSAMXG00000041896	-	81	33.566	ENSPREG00000006650	-	99	33.566	Poecilia_reticulata
ENSAMXG00000041896	-	65	34.565	ENSPREG00000005117	-	92	34.565	Poecilia_reticulata
ENSAMXG00000041896	-	97	36.750	ENSPREG00000006122	-	85	36.750	Poecilia_reticulata
ENSAMXG00000041896	-	96	35.065	ENSPREG00000005134	-	54	35.065	Poecilia_reticulata
ENSAMXG00000041896	-	97	50.000	ENSPREG00000006496	-	89	50.000	Poecilia_reticulata
ENSAMXG00000041896	-	72	64.961	ENSPNAG00000009767	-	52	64.961	Pygocentrus_nattereri
ENSAMXG00000041896	-	97	51.988	ENSPNAG00000021509	-	66	51.988	Pygocentrus_nattereri
ENSAMXG00000041896	-	97	45.508	ENSPNAG00000015770	-	51	45.508	Pygocentrus_nattereri
ENSAMXG00000041896	-	97	40.426	ENSPNAG00000017165	-	51	40.426	Pygocentrus_nattereri
ENSAMXG00000041896	-	94	41.986	ENSSDUG00000010222	-	65	42.270	Seriola_dumerili
ENSAMXG00000041896	-	97	38.394	ENSSDUG00000010009	-	63	38.394	Seriola_dumerili
ENSAMXG00000041896	-	97	36.901	ENSSLDG00000003503	-	65	36.901	Seriola_lalandi_dorsalis
ENSAMXG00000041896	-	82	34.426	ENSTRUG00000021236	-	84	34.426	Takifugu_rubripes
ENSAMXG00000041896	-	76	35.048	ENSTNIG00000006817	-	53	35.048	Tetraodon_nigroviridis
ENSAMXG00000041896	-	93	36.819	ENSXMAG00000025551	-	58	36.988	Xiphophorus_maculatus
ENSAMXG00000041896	-	97	43.539	ENSXMAG00000023370	-	64	43.539	Xiphophorus_maculatus
ENSAMXG00000041896	-	86	41.909	ENSXMAG00000024180	-	59	41.909	Xiphophorus_maculatus
ENSAMXG00000041896	-	97	44.559	ENSXMAG00000026865	-	50	44.559	Xiphophorus_maculatus
ENSAMXG00000041896	-	97	52.500	ENSXMAG00000022159	-	53	52.500	Xiphophorus_maculatus
ENSAMXG00000041896	-	97	44.150	ENSXMAG00000021254	-	50	44.150	Xiphophorus_maculatus
ENSAMXG00000041896	-	97	36.842	ENSXMAG00000021174	-	51	36.842	Xiphophorus_maculatus
ENSAMXG00000041896	-	97	39.320	ENSXMAG00000021440	-	57	39.320	Xiphophorus_maculatus
ENSAMXG00000041896	-	76	30.684	ENSXMAG00000023507	-	90	30.684	Xiphophorus_maculatus
ENSAMXG00000041896	-	92	43.402	ENSXMAG00000029360	-	68	43.402	Xiphophorus_maculatus