EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000041903 (Gene tree)
Gene ID: 103036476
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 21162 bases
Position: chr23:10959141-10980302
Accession: 103036476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034283	IBN_N	PF03810.19	8.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050855	-	6958	XM_007230771	ENSAMXP00000034283	876 (aa)	XP_007230833	UPI000BBD5331

Gene Model

Click here to download ENSAMXG00000041903's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041903	kpnb1	100	92.922	ENSG00000108424	KPNB1	100	95.000	Homo_sapiens
ENSAMXG00000041903	kpnb1	100	97.489	ENSAPOG00000020572	kpnb1	100	97.489	Acanthochromis_polyacanthus
ENSAMXG00000041903	kpnb1	96	93.246	ENSAMEG00000004613	KPNB1	100	93.246	Ailuropoda_melanoleuca
ENSAMXG00000041903	kpnb1	98	97.664	ENSACIG00000023130	kpnb1	99	97.664	Amphilophus_citrinellus
ENSAMXG00000041903	kpnb1	100	97.489	ENSAOCG00000007048	kpnb1	100	97.489	Amphiprion_ocellaris
ENSAMXG00000041903	kpnb1	100	97.489	ENSAPEG00000008270	kpnb1	100	97.489	Amphiprion_percula
ENSAMXG00000041903	kpnb1	100	97.146	ENSATEG00000015139	kpnb1	100	97.146	Anabas_testudineus
ENSAMXG00000041903	kpnb1	96	92.663	ENSAPLG00000010177	KPNB1	96	92.663	Anas_platyrhynchos
ENSAMXG00000041903	kpnb1	100	93.607	ENSACAG00000007097	KPNB1	100	93.607	Anolis_carolinensis
ENSAMXG00000041903	kpnb1	100	90.183	ENSANAG00000024932	-	99	90.183	Aotus_nancymaae
ENSAMXG00000041903	kpnb1	100	97.374	ENSACLG00000015070	kpnb1	100	97.374	Astatotilapia_calliptera
ENSAMXG00000041903	kpnb1	100	93.265	ENSBTAG00000006586	KPNB1	100	93.265	Bos_taurus
ENSAMXG00000041903	kpnb1	99	48.350	WBGene00002075	imb-1	98	48.350	Caenorhabditis_elegans
ENSAMXG00000041903	kpnb1	100	93.037	ENSCJAG00000007834	KPNB1	100	93.037	Callithrix_jacchus
ENSAMXG00000041903	kpnb1	100	93.265	ENSCAFG00000016678	KPNB1	100	93.265	Canis_familiaris
ENSAMXG00000041903	kpnb1	100	93.265	ENSCAFG00020023205	KPNB1	100	93.265	Canis_lupus_dingo
ENSAMXG00000041903	kpnb1	100	93.265	ENSCHIG00000014896	KPNB1	100	93.265	Capra_hircus
ENSAMXG00000041903	kpnb1	100	91.324	ENSTSYG00000014472	KPNB1	99	91.324	Carlito_syrichta
ENSAMXG00000041903	kpnb1	96	93.476	ENSCAPG00000014185	KPNB1	100	93.476	Cavia_aperea
ENSAMXG00000041903	kpnb1	100	93.265	ENSCPOG00000006566	KPNB1	100	93.265	Cavia_porcellus
ENSAMXG00000041903	kpnb1	100	86.281	ENSCCAG00000029263	-	99	86.281	Cebus_capucinus
ENSAMXG00000041903	kpnb1	97	79.577	ENSCCAG00000018551	-	100	79.577	Cebus_capucinus
ENSAMXG00000041903	kpnb1	100	92.922	ENSCATG00000037124	KPNB1	100	92.922	Cercocebus_atys
ENSAMXG00000041903	kpnb1	100	93.151	ENSCLAG00000017091	KPNB1	100	93.151	Chinchilla_lanigera
ENSAMXG00000041903	kpnb1	100	92.922	ENSCSAG00000002605	KPNB1	100	92.922	Chlorocebus_sabaeus
ENSAMXG00000041903	kpnb1	73	83.019	ENSCHOG00000010604	KPNB1	73	83.019	Choloepus_hoffmanni
ENSAMXG00000041903	kpnb1	99	93.743	ENSCPBG00000027423	KPNB1	94	93.743	Chrysemys_picta_bellii
ENSAMXG00000041903	kpnb1	99	65.450	ENSCING00000004639	-	99	65.450	Ciona_intestinalis
ENSAMXG00000041903	kpnb1	100	62.938	ENSCSAVG00000008624	-	100	62.938	Ciona_savignyi
ENSAMXG00000041903	kpnb1	96	92.006	ENSCANG00000013489	KPNB1	100	92.006	Colobus_angolensis_palliatus
ENSAMXG00000041903	kpnb1	100	93.151	ENSCGRG00001016042	Kpnb1	100	93.151	Cricetulus_griseus_chok1gshd
ENSAMXG00000041903	kpnb1	96	93.357	ENSCGRG00000013910	Kpnb1	100	93.357	Cricetulus_griseus_crigri
ENSAMXG00000041903	kpnb1	97	94.014	ENSCSEG00000007991	kpnb1	100	94.014	Cynoglossus_semilaevis
ENSAMXG00000041903	kpnb1	100	98.059	ENSDARG00000104889	kpnb1	100	98.059	Danio_rerio
ENSAMXG00000041903	kpnb1	99	62.557	FBgn0262743	Fs(2)Ket	99	62.557	Drosophila_melanogaster
ENSAMXG00000041903	kpnb1	98	80.626	ENSEBUG00000013869	kpnb1	98	80.626	Eptatretus_burgeri
ENSAMXG00000041903	kpnb1	100	93.265	ENSEASG00005000805	KPNB1	100	93.265	Equus_asinus_asinus
ENSAMXG00000041903	kpnb1	100	93.265	ENSECAG00000014560	KPNB1	100	93.265	Equus_caballus
ENSAMXG00000041903	kpnb1	85	93.970	ENSEEUG00000005046	KPNB1	88	93.970	Erinaceus_europaeus
ENSAMXG00000041903	kpnb1	100	97.260	ENSELUG00000015847	kpnb1	100	97.260	Esox_lucius
ENSAMXG00000041903	kpnb1	100	93.265	ENSFCAG00000023994	KPNB1	100	93.265	Felis_catus
ENSAMXG00000041903	kpnb1	96	93.713	ENSFDAG00000019923	KPNB1	100	93.713	Fukomys_damarensis
ENSAMXG00000041903	kpnb1	100	96.575	ENSFHEG00000020199	kpnb1	100	96.575	Fundulus_heteroclitus
ENSAMXG00000041903	kpnb1	100	92.123	ENSGMOG00000011607	kpnb1	99	92.123	Gadus_morhua
ENSAMXG00000041903	kpnb1	100	92.922	ENSGALG00000036962	KPNB1	100	92.922	Gallus_gallus
ENSAMXG00000041903	kpnb1	100	96.347	ENSGAFG00000000783	kpnb1	100	96.347	Gambusia_affinis
ENSAMXG00000041903	kpnb1	100	92.542	ENSGACG00000014765	kpnb1	100	92.542	Gasterosteus_aculeatus
ENSAMXG00000041903	kpnb1	96	93.341	ENSGAGG00000023737	KPNB1	92	93.341	Gopherus_agassizii
ENSAMXG00000041903	kpnb1	100	92.922	ENSGGOG00000008089	KPNB1	100	92.922	Gorilla_gorilla
ENSAMXG00000041903	kpnb1	100	97.374	ENSHBUG00000016826	kpnb1	100	97.374	Haplochromis_burtoni
ENSAMXG00000041903	kpnb1	100	93.493	ENSHGLG00000014138	KPNB1	100	93.493	Heterocephalus_glaber_female
ENSAMXG00000041903	kpnb1	96	93.713	ENSHGLG00100006572	KPNB1	100	93.713	Heterocephalus_glaber_male
ENSAMXG00000041903	kpnb1	100	94.521	ENSHCOG00000002084	kpnb1	100	94.521	Hippocampus_comes
ENSAMXG00000041903	kpnb1	99	94.090	ENSIPUG00000012402	kpnb1	95	94.090	Ictalurus_punctatus
ENSAMXG00000041903	kpnb1	100	93.265	ENSSTOG00000007896	KPNB1	100	93.265	Ictidomys_tridecemlineatus
ENSAMXG00000041903	kpnb1	100	92.922	ENSJJAG00000010909	Kpnb1	100	92.922	Jaculus_jaculus
ENSAMXG00000041903	kpnb1	100	96.119	ENSKMAG00000001547	kpnb1	100	96.119	Kryptolebias_marmoratus
ENSAMXG00000041903	kpnb1	99	96.540	ENSLBEG00000025794	kpnb1	99	94.737	Labrus_bergylta
ENSAMXG00000041903	kpnb1	88	92.737	ENSLACG00000017620	KPNB1	99	92.737	Latimeria_chalumnae
ENSAMXG00000041903	kpnb1	100	96.918	ENSLOCG00000013753	kpnb1	100	96.918	Lepisosteus_oculatus
ENSAMXG00000041903	kpnb1	100	88.356	ENSLAFG00000001328	KPNB1	100	88.356	Loxodonta_africana
ENSAMXG00000041903	kpnb1	99	90.607	ENSMFAG00000030197	KPNB1	100	93.120	Macaca_fascicularis
ENSAMXG00000041903	kpnb1	99	91.543	ENSMMUG00000019760	KPNB1	99	91.543	Macaca_mulatta
ENSAMXG00000041903	kpnb1	100	92.922	ENSMNEG00000040927	KPNB1	100	92.922	Macaca_nemestrina
ENSAMXG00000041903	kpnb1	100	90.639	ENSMLEG00000038185	KPNB1	99	90.639	Mandrillus_leucophaeus
ENSAMXG00000041903	kpnb1	100	97.489	ENSMAMG00000011036	kpnb1	100	97.489	Mastacembelus_armatus
ENSAMXG00000041903	kpnb1	100	97.374	ENSMZEG00005004564	kpnb1	100	97.374	Maylandia_zebra
ENSAMXG00000041903	kpnb1	55	92.961	ENSMGAG00000002770	-	100	92.961	Meleagris_gallopavo
ENSAMXG00000041903	kpnb1	100	93.151	ENSMAUG00000006211	Kpnb1	100	93.151	Mesocricetus_auratus
ENSAMXG00000041903	kpnb1	100	93.265	ENSMICG00000012059	KPNB1	84	93.265	Microcebus_murinus
ENSAMXG00000041903	kpnb1	100	93.151	ENSMOCG00000003683	Kpnb1	100	93.151	Microtus_ochrogaster
ENSAMXG00000041903	kpnb1	100	93.721	ENSMODG00000012505	KPNB1	100	93.721	Monodelphis_domestica
ENSAMXG00000041903	kpnb1	100	97.489	ENSMALG00000000863	kpnb1	100	97.489	Monopterus_albus
ENSAMXG00000041903	kpnb1	94	93.674	MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.674	Mus_caroli
ENSAMXG00000041903	kpnb1	100	93.037	ENSMUSG00000001440	Kpnb1	100	93.037	Mus_musculus
ENSAMXG00000041903	kpnb1	100	92.246	ENSMPUG00000015220	KPNB1	100	92.246	Mustela_putorius_furo
ENSAMXG00000041903	kpnb1	100	87.827	ENSMLUG00000014522	KPNB1	100	87.827	Myotis_lucifugus
ENSAMXG00000041903	kpnb1	96	93.357	ENSNGAG00000017610	Kpnb1	100	93.357	Nannospalax_galili
ENSAMXG00000041903	kpnb1	100	97.374	ENSNBRG00000019305	kpnb1	100	97.374	Neolamprologus_brichardi
ENSAMXG00000041903	kpnb1	100	92.922	ENSNLEG00000001446	KPNB1	100	92.922	Nomascus_leucogenys
ENSAMXG00000041903	kpnb1	100	88.014	ENSMEUG00000014284	KPNB1	100	88.014	Notamacropus_eugenii
ENSAMXG00000041903	kpnb1	100	93.151	ENSODEG00000017287	KPNB1	100	93.151	Octodon_degus
ENSAMXG00000041903	kpnb1	100	97.374	ENSONIG00000009269	kpnb1	100	97.374	Oreochromis_niloticus
ENSAMXG00000041903	kpnb1	100	93.265	ENSOCUG00000015425	KPNB1	100	93.265	Oryctolagus_cuniculus
ENSAMXG00000041903	kpnb1	100	96.918	ENSORLG00000019936	kpnb1	100	96.918	Oryzias_latipes
ENSAMXG00000041903	kpnb1	100	96.918	ENSORLG00020021181	kpnb1	100	96.918	Oryzias_latipes_hni
ENSAMXG00000041903	kpnb1	100	96.804	ENSORLG00015012177	kpnb1	100	96.804	Oryzias_latipes_hsok
ENSAMXG00000041903	kpnb1	100	97.032	ENSOMEG00000021022	kpnb1	100	97.032	Oryzias_melastigma
ENSAMXG00000041903	kpnb1	100	93.151	ENSOGAG00000006153	KPNB1	100	93.151	Otolemur_garnettii
ENSAMXG00000041903	kpnb1	97	92.623	ENSOARG00000008469	KPNB1	99	92.623	Ovis_aries
ENSAMXG00000041903	kpnb1	100	92.922	ENSPPAG00000028842	KPNB1	100	92.922	Pan_paniscus
ENSAMXG00000041903	kpnb1	97	93.152	ENSPPRG00000022879	KPNB1	97	93.152	Panthera_pardus
ENSAMXG00000041903	kpnb1	97	93.152	ENSPTIG00000006870	KPNB1	97	93.152	Panthera_tigris_altaica
ENSAMXG00000041903	kpnb1	100	92.922	ENSPTRG00000009333	KPNB1	100	92.922	Pan_troglodytes
ENSAMXG00000041903	kpnb1	100	92.922	ENSPANG00000022099	KPNB1	100	92.922	Papio_anubis
ENSAMXG00000041903	kpnb1	100	96.461	ENSPKIG00000017563	kpnb1	100	96.461	Paramormyrops_kingsleyae
ENSAMXG00000041903	kpnb1	96	93.950	ENSPSIG00000009775	KPNB1	100	93.950	Pelodiscus_sinensis
ENSAMXG00000041903	kpnb1	100	90.194	ENSPMGG00000001041	kpnb1	93	90.194	Periophthalmus_magnuspinnatus
ENSAMXG00000041903	kpnb1	100	93.151	ENSPEMG00000017783	Kpnb1	100	93.151	Peromyscus_maniculatus_bairdii
ENSAMXG00000041903	kpnb1	99	84.852	ENSPMAG00000007117	kpnb1	99	84.852	Petromyzon_marinus
ENSAMXG00000041903	kpnb1	100	93.607	ENSPCIG00000001034	KPNB1	100	93.607	Phascolarctos_cinereus
ENSAMXG00000041903	kpnb1	100	96.347	ENSPFOG00000009014	kpnb1	100	96.347	Poecilia_formosa
ENSAMXG00000041903	kpnb1	100	96.347	ENSPLAG00000010922	kpnb1	100	96.347	Poecilia_latipinna
ENSAMXG00000041903	kpnb1	100	96.347	ENSPREG00000012268	kpnb1	100	96.347	Poecilia_reticulata
ENSAMXG00000041903	kpnb1	100	92.466	ENSPPYG00000025935	KPNB1	100	92.466	Pongo_abelii
ENSAMXG00000041903	kpnb1	75	79.000	ENSPCAG00000002526	KPNB1	78	79.000	Procavia_capensis
ENSAMXG00000041903	kpnb1	100	93.265	ENSPCOG00000026259	KPNB1	100	93.265	Propithecus_coquereli
ENSAMXG00000041903	kpnb1	100	92.808	ENSPVAG00000004910	KPNB1	100	92.808	Pteropus_vampyrus
ENSAMXG00000041903	kpnb1	100	93.013	ENSPNYG00000017703	kpnb1	96	97.449	Pundamilia_nyererei
ENSAMXG00000041903	kpnb1	99	90.607	ENSPNAG00000024047	kpnb1	98	90.607	Pygocentrus_nattereri
ENSAMXG00000041903	kpnb1	100	93.037	ENSRNOG00000009275	Kpnb1	100	93.037	Rattus_norvegicus
ENSAMXG00000041903	kpnb1	100	92.808	ENSRBIG00000002254	KPNB1	99	92.808	Rhinopithecus_bieti
ENSAMXG00000041903	kpnb1	98	93.023	ENSRROG00000030419	KPNB1	99	93.023	Rhinopithecus_roxellana
ENSAMXG00000041903	kpnb1	99	34.699	YLR347C	KAP95	99	34.699	Saccharomyces_cerevisiae
ENSAMXG00000041903	kpnb1	100	92.922	ENSSBOG00000030025	KPNB1	94	92.922	Saimiri_boliviensis_boliviensis
ENSAMXG00000041903	kpnb1	96	93.506	ENSSHAG00000018214	KPNB1	100	93.506	Sarcophilus_harrisii
ENSAMXG00000041903	kpnb1	100	97.032	ENSSFOG00015020000	kpnb1	100	97.032	Scleropages_formosus
ENSAMXG00000041903	kpnb1	100	97.717	ENSSDUG00000016218	kpnb1	100	97.717	Seriola_dumerili
ENSAMXG00000041903	kpnb1	98	97.786	ENSSLDG00000021549	kpnb1	97	97.786	Seriola_lalandi_dorsalis
ENSAMXG00000041903	kpnb1	100	93.151	ENSSPUG00000017799	KPNB1	100	93.151	Sphenodon_punctatus
ENSAMXG00000041903	kpnb1	100	97.717	ENSSPAG00000019346	kpnb1	100	97.717	Stegastes_partitus
ENSAMXG00000041903	kpnb1	100	93.265	ENSSSCG00000017514	KPNB1	100	93.265	Sus_scrofa
ENSAMXG00000041903	kpnb1	96	88.138	ENSTGUG00000003387	KPNB1	100	88.138	Taeniopygia_guttata
ENSAMXG00000041903	kpnb1	100	94.521	ENSTRUG00000000542	kpnb1	100	94.521	Takifugu_rubripes
ENSAMXG00000041903	kpnb1	100	95.205	ENSTNIG00000006494	kpnb1	100	95.205	Tetraodon_nigroviridis
ENSAMXG00000041903	kpnb1	96	93.357	ENSTTRG00000004682	KPNB1	100	93.357	Tursiops_truncatus
ENSAMXG00000041903	kpnb1	100	93.265	ENSUAMG00000025344	KPNB1	99	93.265	Ursus_americanus
ENSAMXG00000041903	kpnb1	98	92.209	ENSUMAG00000016471	KPNB1	98	92.209	Ursus_maritimus
ENSAMXG00000041903	kpnb1	100	79.566	ENSVPAG00000003675	KPNB1	100	79.566	Vicugna_pacos
ENSAMXG00000041903	kpnb1	100	93.265	ENSVVUG00000003085	KPNB1	100	93.265	Vulpes_vulpes
ENSAMXG00000041903	kpnb1	100	92.009	ENSXETG00000014717	kpnb1	100	92.009	Xenopus_tropicalis
ENSAMXG00000041903	kpnb1	100	96.233	ENSXMAG00000018792	kpnb1	100	96.233	Xiphophorus_maculatus