EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000041973 (Gene tree)
Gene ID: 103040159
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1827 bases
Position: chr10:31690729-31692555
Accession: 103040159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046880	RRM_1	PF00076.22	1.5e-21	1	2
ENSAMXP00000046880	RRM_1	PF00076.22	1.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040602	-	1827	XM_015607658	ENSAMXP00000046880	608 (aa)	XP_015463144	UPI000BBD58C9

Gene Model

Click here to download ENSAMXG00000041973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000041973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000041973	rbm12b	66	51.613	ENSAMXG00000020853	zgc:153215	70	53.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000041973	rbm12b	91	42.857	ENSG00000183808	RBM12B	99	76.543	Homo_sapiens
ENSAMXG00000041973	rbm12b	100	45.714	ENSAPOG00000013963	rbm12b	100	45.015	Acanthochromis_polyacanthus
ENSAMXG00000041973	rbm12b	87	44.156	ENSAMEG00000007134	RBM12B	66	44.156	Ailuropoda_melanoleuca
ENSAMXG00000041973	rbm12b	73	30.080	ENSACIG00000013317	zgc:153215	99	32.780	Amphilophus_citrinellus
ENSAMXG00000041973	rbm12b	74	51.542	ENSACIG00000014943	rbm12b	97	72.973	Amphilophus_citrinellus
ENSAMXG00000041973	rbm12b	100	45.991	ENSAOCG00000024270	rbm12b	100	43.459	Amphiprion_ocellaris
ENSAMXG00000041973	rbm12b	98	34.959	ENSAPEG00000022079	rbm12b	99	51.007	Amphiprion_percula
ENSAMXG00000041973	rbm12b	100	47.894	ENSATEG00000004578	rbm12b	97	47.179	Anabas_testudineus
ENSAMXG00000041973	rbm12b	63	52.500	ENSATEG00000001886	zgc:153215	77	48.352	Anabas_testudineus
ENSAMXG00000041973	rbm12b	100	37.966	ENSAPLG00000002020	RBM12B	100	38.340	Anas_platyrhynchos
ENSAMXG00000041973	rbm12b	87	39.425	ENSACAG00000003463	RBM12B	57	38.961	Anolis_carolinensis
ENSAMXG00000041973	rbm12b	87	42.857	ENSANAG00000034015	RBM12B	67	42.857	Aotus_nancymaae
ENSAMXG00000041973	rbm12b	100	46.012	ENSACLG00000005575	rbm12b	98	45.552	Astatotilapia_calliptera
ENSAMXG00000041973	rbm12b	93	44.672	ENSACLG00000005578	rbm12b	100	44.672	Astatotilapia_calliptera
ENSAMXG00000041973	rbm12b	87	42.857	ENSBTAG00000013408	RBM12B	65	42.857	Bos_taurus
ENSAMXG00000041973	rbm12b	87	41.988	ENSCAFG00000009109	RBM12B	57	41.558	Canis_familiaris
ENSAMXG00000041973	rbm12b	87	41.988	ENSCAFG00020012203	RBM12B	64	41.558	Canis_lupus_dingo
ENSAMXG00000041973	rbm12b	74	40.937	ENSCHIG00000006790	RBM12B	67	40.286	Capra_hircus
ENSAMXG00000041973	rbm12b	87	42.857	ENSTSYG00000012515	RBM12B	57	42.857	Carlito_syrichta
ENSAMXG00000041973	rbm12b	87	42.857	ENSCAPG00000003543	RBM12B	59	42.857	Cavia_aperea
ENSAMXG00000041973	rbm12b	87	42.857	ENSCPOG00000007815	RBM12B	59	42.857	Cavia_porcellus
ENSAMXG00000041973	rbm12b	91	42.857	ENSCATG00000030769	RBM12B	69	42.857	Cercocebus_atys
ENSAMXG00000041973	rbm12b	87	42.857	ENSCLAG00000017617	RBM12B	59	42.857	Chinchilla_lanigera
ENSAMXG00000041973	rbm12b	87	42.857	ENSCSAG00000018559	RBM12B	56	42.857	Chlorocebus_sabaeus
ENSAMXG00000041973	rbm12b	85	41.463	ENSCHOG00000008934	RBM12B	58	41.270	Choloepus_hoffmanni
ENSAMXG00000041973	rbm12b	100	38.881	ENSCPBG00000003061	RBM12B	100	37.216	Chrysemys_picta_bellii
ENSAMXG00000041973	rbm12b	89	42.857	ENSCANG00000030379	RBM12B	67	42.857	Colobus_angolensis_palliatus
ENSAMXG00000041973	rbm12b	87	45.455	ENSCGRG00001008710	-	65	45.455	Cricetulus_griseus_chok1gshd
ENSAMXG00000041973	rbm12b	100	47.885	ENSCSEG00000004610	rbm12b	97	47.424	Cynoglossus_semilaevis
ENSAMXG00000041973	rbm12b	100	42.986	ENSCVAG00000011047	rbm12b	100	44.753	Cyprinodon_variegatus
ENSAMXG00000041973	rbm12b	100	53.478	ENSDARG00000079717	rbm12b	100	53.913	Danio_rerio
ENSAMXG00000041973	rbm12b	87	41.558	ENSDNOG00000041608	RBM12B	56	41.558	Dasypus_novemcinctus
ENSAMXG00000041973	rbm12b	87	41.598	ENSDORG00000024034	-	60	41.558	Dipodomys_ordii
ENSAMXG00000041973	rbm12b	74	41.633	ENSETEG00000013005	-	65	41.189	Echinops_telfairi
ENSAMXG00000041973	rbm12b	87	44.156	ENSEASG00005016297	RBM12B	64	44.156	Equus_asinus_asinus
ENSAMXG00000041973	rbm12b	87	44.156	ENSECAG00000017870	RBM12B	58	44.156	Equus_caballus
ENSAMXG00000041973	rbm12b	72	35.686	ENSELUG00000009039	zgc:153215	78	36.759	Esox_lucius
ENSAMXG00000041973	rbm12b	87	41.558	ENSFCAG00000029274	RBM12B	65	41.558	Felis_catus
ENSAMXG00000041973	rbm12b	100	37.872	ENSFALG00000014893	RBM12B	100	38.014	Ficedula_albicollis
ENSAMXG00000041973	rbm12b	87	42.857	ENSFDAG00000005576	RBM12B	58	42.857	Fukomys_damarensis
ENSAMXG00000041973	rbm12b	100	44.704	ENSFHEG00000016425	rbm12b	100	43.769	Fundulus_heteroclitus
ENSAMXG00000041973	rbm12b	99	51.097	ENSGMOG00000013467	rbm12b	100	49.922	Gadus_morhua
ENSAMXG00000041973	rbm12b	100	39.038	ENSGALG00000035129	RBM12B	100	38.244	Gallus_gallus
ENSAMXG00000041973	rbm12b	100	45.833	ENSGAFG00000007224	rbm12b	100	45.356	Gambusia_affinis
ENSAMXG00000041973	rbm12b	100	48.837	ENSGACG00000008682	rbm12b	99	46.894	Gasterosteus_aculeatus
ENSAMXG00000041973	rbm12b	100	38.793	ENSGAGG00000009774	RBM12B	100	37.213	Gopherus_agassizii
ENSAMXG00000041973	rbm12b	91	42.857	ENSGGOG00000011909	RBM12B	68	42.857	Gorilla_gorilla
ENSAMXG00000041973	rbm12b	89	65.882	ENSHBUG00000016227	rbm12b	86	65.882	Haplochromis_burtoni
ENSAMXG00000041973	rbm12b	68	41.964	ENSHBUG00000016150	zgc:153215	81	41.964	Haplochromis_burtoni
ENSAMXG00000041973	rbm12b	87	42.857	ENSHGLG00000009063	RBM12B	59	42.857	Heterocephalus_glaber_female
ENSAMXG00000041973	rbm12b	87	42.857	ENSHGLG00100021324	RBM12B	59	42.857	Heterocephalus_glaber_male
ENSAMXG00000041973	rbm12b	100	44.601	ENSHCOG00000014952	rbm12b	100	43.730	Hippocampus_comes
ENSAMXG00000041973	rbm12b	73	31.818	ENSIPUG00000019731	zgc:153215	98	30.418	Ictalurus_punctatus
ENSAMXG00000041973	rbm12b	100	65.142	ENSIPUG00000001167	RBM12B	97	64.984	Ictalurus_punctatus
ENSAMXG00000041973	rbm12b	99	42.857	ENSSTOG00000027445	RBM12B	76	42.857	Ictidomys_tridecemlineatus
ENSAMXG00000041973	rbm12b	87	42.857	ENSJJAG00000004165	-	65	42.857	Jaculus_jaculus
ENSAMXG00000041973	rbm12b	74	33.478	ENSKMAG00000004958	zgc:153215	99	32.112	Kryptolebias_marmoratus
ENSAMXG00000041973	rbm12b	100	43.011	ENSKMAG00000013704	rbm12b	97	42.593	Kryptolebias_marmoratus
ENSAMXG00000041973	rbm12b	100	43.011	ENSKMAG00000013715	rbm12b	100	42.593	Kryptolebias_marmoratus
ENSAMXG00000041973	rbm12b	100	37.465	ENSLACG00000007177	RBM12B	100	37.853	Latimeria_chalumnae
ENSAMXG00000041973	rbm12b	100	52.071	ENSLOCG00000018344	rbm12b	100	50.740	Lepisosteus_oculatus
ENSAMXG00000041973	rbm12b	87	45.455	ENSLAFG00000029949	RBM12B	67	45.455	Loxodonta_africana
ENSAMXG00000041973	rbm12b	91	42.857	ENSMFAG00000045430	RBM12B	69	42.857	Macaca_fascicularis
ENSAMXG00000041973	rbm12b	91	42.857	ENSMMUG00000005558	RBM12B	68	42.857	Macaca_mulatta
ENSAMXG00000041973	rbm12b	91	42.857	ENSMNEG00000041292	RBM12B	69	42.857	Macaca_nemestrina
ENSAMXG00000041973	rbm12b	91	42.857	ENSMLEG00000037288	RBM12B	68	42.857	Mandrillus_leucophaeus
ENSAMXG00000041973	rbm12b	100	50.078	ENSMAMG00000011998	rbm12b	100	49.375	Mastacembelus_armatus
ENSAMXG00000041973	rbm12b	100	45.706	ENSMZEG00005015005	rbm12b	100	45.245	Maylandia_zebra
ENSAMXG00000041973	rbm12b	100	43.405	ENSMZEG00005014845	rbm12b	99	42.989	Maylandia_zebra
ENSAMXG00000041973	rbm12b	74	41.910	ENSMGAG00000011985	RBM12B	99	41.131	Meleagris_gallopavo
ENSAMXG00000041973	rbm12b	87	45.455	ENSMAUG00000021752	-	68	45.455	Mesocricetus_auratus
ENSAMXG00000041973	rbm12b	87	42.857	ENSMICG00000036969	RBM12B	67	42.857	Microcebus_murinus
ENSAMXG00000041973	rbm12b	90	42.857	ENSMOCG00000005603	-	70	42.857	Microtus_ochrogaster
ENSAMXG00000041973	rbm12b	99	46.501	ENSMMOG00000002404	rbm12b	94	44.898	Mola_mola
ENSAMXG00000041973	rbm12b	69	42.500	ENSMMOG00000003372	zgc:153215	80	42.500	Mola_mola
ENSAMXG00000041973	rbm12b	100	36.933	ENSMODG00000007436	RBM12B	98	36.267	Monodelphis_domestica
ENSAMXG00000041973	rbm12b	100	46.271	ENSMALG00000012059	rbm12b	100	46.119	Monopterus_albus
ENSAMXG00000041973	rbm12b	74	32.203	ENSMALG00000001222	zgc:153215	99	31.780	Monopterus_albus
ENSAMXG00000041973	rbm12b	94	40.557	ENSMUSG00000052137	Rbm12b2	70	39.122	Mus_musculus
ENSAMXG00000041973	rbm12b	87	44.000	ENSMUSG00000046667	Rbm12b1	68	44.000	Mus_musculus
ENSAMXG00000041973	rbm12b	87	42.254	MGP_SPRETEiJ_G0026765	-	61	42.254	Mus_spretus
ENSAMXG00000041973	rbm12b	87	42.254	MGP_SPRETEiJ_G0026766	-	67	42.254	Mus_spretus
ENSAMXG00000041973	rbm12b	87	42.857	ENSMPUG00000018637	RBM12B	56	42.857	Mustela_putorius_furo
ENSAMXG00000041973	rbm12b	90	41.860	ENSMLUG00000002359	RBM12B	61	41.051	Myotis_lucifugus
ENSAMXG00000041973	rbm12b	87	41.558	ENSNGAG00000002801	-	61	41.558	Nannospalax_galili
ENSAMXG00000041973	rbm12b	100	46.967	ENSNBRG00000015057	rbm12b	100	46.719	Neolamprologus_brichardi
ENSAMXG00000041973	rbm12b	91	42.857	ENSNLEG00000032050	RBM12B	68	42.857	Nomascus_leucogenys
ENSAMXG00000041973	rbm12b	87	42.945	ENSODEG00000019204	RBM12B	59	42.857	Octodon_degus
ENSAMXG00000041973	rbm12b	100	47.833	ENSONIG00000020612	rbm12b	100	47.214	Oreochromis_niloticus
ENSAMXG00000041973	rbm12b	100	36.273	ENSOANG00000015735	-	97	37.429	Ornithorhynchus_anatinus
ENSAMXG00000041973	rbm12b	87	42.857	ENSOCUG00000010353	RBM12B	65	42.857	Oryctolagus_cuniculus
ENSAMXG00000041973	rbm12b	100	44.495	ENSORLG00000008228	rbm12b	97	43.731	Oryzias_latipes
ENSAMXG00000041973	rbm12b	100	44.870	ENSORLG00020013619	rbm12b	97	44.172	Oryzias_latipes_hni
ENSAMXG00000041973	rbm12b	100	44.495	ENSORLG00015019999	rbm12b	97	44.018	Oryzias_latipes_hsok
ENSAMXG00000041973	rbm12b	100	45.942	ENSOMEG00000022523	rbm12b	97	45.329	Oryzias_melastigma
ENSAMXG00000041973	rbm12b	87	42.857	ENSOGAG00000002979	RBM12B	57	42.857	Otolemur_garnettii
ENSAMXG00000041973	rbm12b	87	41.558	ENSPTIG00000020071	RBM12B	65	41.558	Panthera_tigris_altaica
ENSAMXG00000041973	rbm12b	91	42.857	ENSPTRG00000020420	RBM12B	68	42.857	Pan_troglodytes
ENSAMXG00000041973	rbm12b	91	42.857	ENSPANG00000035535	RBM12B	68	42.857	Papio_anubis
ENSAMXG00000041973	rbm12b	74	31.377	ENSPKIG00000014851	zgc:153215	99	30.279	Paramormyrops_kingsleyae
ENSAMXG00000041973	rbm12b	100	51.278	ENSPKIG00000018719	rbm12b	99	50.301	Paramormyrops_kingsleyae
ENSAMXG00000041973	rbm12b	100	38.849	ENSPSIG00000001348	RBM12B	100	38.273	Pelodiscus_sinensis
ENSAMXG00000041973	rbm12b	68	43.917	ENSPMGG00000012348	-	97	43.155	Periophthalmus_magnuspinnatus
ENSAMXG00000041973	rbm12b	87	46.753	ENSPEMG00000008279	-	67	46.753	Peromyscus_maniculatus_bairdii
ENSAMXG00000041973	rbm12b	100	36.618	ENSPCIG00000008556	RBM12B	100	35.819	Phascolarctos_cinereus
ENSAMXG00000041973	rbm12b	74	55.814	ENSPFOG00000017451	zgc:153215	66	55.814	Poecilia_formosa
ENSAMXG00000041973	rbm12b	100	45.412	ENSPFOG00000020937	rbm12b	97	45.891	Poecilia_formosa
ENSAMXG00000041973	rbm12b	100	45.372	ENSPLAG00000018782	rbm12b	100	45.220	Poecilia_latipinna
ENSAMXG00000041973	rbm12b	100	44.917	ENSPMEG00000011418	rbm12b	100	45.372	Poecilia_mexicana
ENSAMXG00000041973	rbm12b	100	44.917	ENSPREG00000020770	rbm12b	100	45.666	Poecilia_reticulata
ENSAMXG00000041973	rbm12b	87	42.857	ENSPPYG00000018745	RBM12B	60	42.857	Pongo_abelii
ENSAMXG00000041973	rbm12b	100	44.156	ENSPCOG00000023546	RBM12B	74	44.156	Propithecus_coquereli
ENSAMXG00000041973	rbm12b	87	42.857	ENSPVAG00000011803	RBM12B	61	42.857	Pteropus_vampyrus
ENSAMXG00000041973	rbm12b	100	46.282	ENSPNYG00000016696	rbm12b	100	45.827	Pundamilia_nyererei
ENSAMXG00000041973	rbm12b	65	53.933	ENSPNAG00000025628	zgc:153215	76	53.933	Pygocentrus_nattereri
ENSAMXG00000041973	rbm12b	100	69.599	ENSPNAG00000008126	rbm12b	97	70.216	Pygocentrus_nattereri
ENSAMXG00000041973	rbm12b	86	42.254	ENSRNOG00000016330	Rbm12b	66	42.254	Rattus_norvegicus
ENSAMXG00000041973	rbm12b	74	41.600	ENSRNOG00000055292	LOC679087	65	39.034	Rattus_norvegicus
ENSAMXG00000041973	rbm12b	87	42.857	ENSRBIG00000035046	RBM12B	73	37.651	Rhinopithecus_bieti
ENSAMXG00000041973	rbm12b	97	42.857	ENSRROG00000023660	RBM12B	73	42.857	Rhinopithecus_roxellana
ENSAMXG00000041973	rbm12b	91	42.857	ENSSBOG00000027592	RBM12B	68	42.857	Saimiri_boliviensis_boliviensis
ENSAMXG00000041973	rbm12b	100	36.485	ENSSHAG00000015335	RBM12B	100	35.686	Sarcophilus_harrisii
ENSAMXG00000041973	rbm12b	100	50.817	ENSSFOG00015001584	rbm12b	100	49.555	Scleropages_formosus
ENSAMXG00000041973	rbm12b	74	34.774	ENSSFOG00015009427	zgc:153215	99	33.058	Scleropages_formosus
ENSAMXG00000041973	rbm12b	74	30.957	ENSSMAG00000019013	zgc:153215	96	30.000	Scophthalmus_maximus
ENSAMXG00000041973	rbm12b	100	46.697	ENSSMAG00000019708	rbm12b	100	44.992	Scophthalmus_maximus
ENSAMXG00000041973	rbm12b	100	47.904	ENSSDUG00000006856	rbm12b	100	46.908	Seriola_dumerili
ENSAMXG00000041973	rbm12b	100	48.358	ENSSLDG00000016156	rbm12b	100	47.156	Seriola_lalandi_dorsalis
ENSAMXG00000041973	rbm12b	89	37.815	ENSSARG00000011845	-	80	37.099	Sorex_araneus
ENSAMXG00000041973	rbm12b	74	38.911	ENSSPUG00000016954	RBM12B	91	38.477	Sphenodon_punctatus
ENSAMXG00000041973	rbm12b	74	32.743	ENSSPAG00000023584	zgc:153215	97	32.965	Stegastes_partitus
ENSAMXG00000041973	rbm12b	100	48.297	ENSSPAG00000006774	rbm12b	100	47.833	Stegastes_partitus
ENSAMXG00000041973	rbm12b	87	44.000	ENSSSCG00000006110	RBM12B	57	44.000	Sus_scrofa
ENSAMXG00000041973	rbm12b	75	41.000	ENSTGUG00000011860	RBM12B	97	40.600	Taeniopygia_guttata
ENSAMXG00000041973	rbm12b	100	44.564	ENSTRUG00000013738	rbm12b	100	43.538	Takifugu_rubripes
ENSAMXG00000041973	rbm12b	74	40.733	ENSTBEG00000000449	RBM12B	63	39.877	Tupaia_belangeri
ENSAMXG00000041973	rbm12b	87	42.857	ENSUAMG00000023639	RBM12B	64	42.857	Ursus_americanus
ENSAMXG00000041973	rbm12b	87	42.857	ENSUMAG00000016008	RBM12B	61	42.857	Ursus_maritimus
ENSAMXG00000041973	rbm12b	87	42.073	ENSVVUG00000002694	RBM12B	64	41.558	Vulpes_vulpes
ENSAMXG00000041973	rbm12b	74	30.290	ENSXETG00000025920	-	97	30.067	Xenopus_tropicalis
ENSAMXG00000041973	rbm12b	86	39.437	ENSXETG00000014696	rbm12b	80	36.250	Xenopus_tropicalis
ENSAMXG00000041973	rbm12b	100	38.404	ENSXETG00000014694	rbm12b	100	40.213	Xenopus_tropicalis
ENSAMXG00000041973	rbm12b	74	30.638	ENSXMAG00000013169	-	68	43.038	Xiphophorus_maculatus
ENSAMXG00000041973	rbm12b	100	46.390	ENSXMAG00000014213	rbm12b	100	45.652	Xiphophorus_maculatus