EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042050 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5133 bases
Position: chr2:514464-519596
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032920	RVT_1	PF00078.27	9.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000029788	-	5133	-	ENSAMXP00000032920	1287 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042050	-	56	30.334	ENSAMXG00000039114	-	75	30.334
ENSAMXG00000042050	-	52	34.346	ENSAMXG00000038169	-	54	34.346
ENSAMXG00000042050	-	58	34.980	ENSAMXG00000039912	-	54	34.980
ENSAMXG00000042050	-	58	30.326	ENSAMXG00000037864	-	67	30.326
ENSAMXG00000042050	-	95	36.471	ENSAMXG00000040613	-	94	36.471
ENSAMXG00000042050	-	51	35.032	ENSAMXG00000035138	-	53	35.032
ENSAMXG00000042050	-	57	36.287	ENSAMXG00000032783	-	56	36.287
ENSAMXG00000042050	-	59	33.416	ENSAMXG00000029230	-	52	33.416
ENSAMXG00000042050	-	99	38.766	ENSAMXG00000041082	-	99	38.766
ENSAMXG00000042050	-	56	31.091	ENSAMXG00000038531	-	57	31.091
ENSAMXG00000042050	-	52	32.347	ENSAMXG00000030908	-	62	32.347
ENSAMXG00000042050	-	97	33.384	ENSAMXG00000032571	-	97	33.384
ENSAMXG00000042050	-	59	34.199	ENSAMXG00000030987	-	57	33.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042050	-	61	63.920	ENSAPOG00000004355	-	100	63.920	Acanthochromis_polyacanthus
ENSAMXG00000042050	-	96	43.049	ENSAOCG00000013724	-	100	43.128	Amphiprion_ocellaris
ENSAMXG00000042050	-	67	40.951	ENSAPEG00000008014	-	100	40.951	Amphiprion_percula
ENSAMXG00000042050	-	100	37.434	ENSAPEG00000000825	-	100	37.538	Amphiprion_percula
ENSAMXG00000042050	-	79	53.218	ENSACLG00000007713	-	97	52.080	Astatotilapia_calliptera
ENSAMXG00000042050	-	93	51.789	ENSACLG00000014813	-	99	50.888	Astatotilapia_calliptera
ENSAMXG00000042050	-	95	45.396	ENSACLG00000013242	-	94	45.396	Astatotilapia_calliptera
ENSAMXG00000042050	-	95	45.316	ENSACLG00000007417	-	94	45.316	Astatotilapia_calliptera
ENSAMXG00000042050	-	63	42.527	ENSACLG00000011588	-	99	41.898	Astatotilapia_calliptera
ENSAMXG00000042050	-	99	37.343	ENSACLG00000027304	-	99	37.343	Astatotilapia_calliptera
ENSAMXG00000042050	-	99	44.158	ENSACLG00000024627	-	98	44.158	Astatotilapia_calliptera
ENSAMXG00000042050	-	69	49.275	ENSACLG00000017452	-	97	49.275	Astatotilapia_calliptera
ENSAMXG00000042050	-	99	44.024	ENSACLG00000014671	-	99	44.024	Astatotilapia_calliptera
ENSAMXG00000042050	-	95	45.396	ENSACLG00000002701	-	94	45.396	Astatotilapia_calliptera
ENSAMXG00000042050	-	63	42.961	ENSACLG00000013905	-	98	42.961	Astatotilapia_calliptera
ENSAMXG00000042050	-	95	43.187	ENSACLG00000026192	-	99	43.187	Astatotilapia_calliptera
ENSAMXG00000042050	-	99	43.873	ENSACLG00000008224	-	99	43.873	Astatotilapia_calliptera
ENSAMXG00000042050	-	62	47.132	ENSFHEG00000022775	-	99	47.132	Fundulus_heteroclitus
ENSAMXG00000042050	-	98	43.318	ENSMZEG00005020286	-	97	43.318	Maylandia_zebra
ENSAMXG00000042050	-	100	37.453	ENSMZEG00005002230	-	100	37.453	Maylandia_zebra
ENSAMXG00000042050	-	88	66.010	ENSORLG00000026148	-	100	66.010	Oryzias_latipes
ENSAMXG00000042050	-	96	44.567	ENSORLG00000025897	-	96	44.567	Oryzias_latipes
ENSAMXG00000042050	-	100	67.678	ENSORLG00000022997	-	100	67.678	Oryzias_latipes
ENSAMXG00000042050	-	99	58.288	ENSORLG00000022133	-	99	58.288	Oryzias_latipes
ENSAMXG00000042050	-	99	43.840	ENSORLG00000027860	-	99	43.840	Oryzias_latipes
ENSAMXG00000042050	-	80	46.346	ENSORLG00000029496	-	90	46.346	Oryzias_latipes
ENSAMXG00000042050	-	78	41.302	ENSORLG00020004022	-	98	41.302	Oryzias_latipes_hni
ENSAMXG00000042050	-	63	49.939	ENSORLG00020004971	-	93	49.939	Oryzias_latipes_hni
ENSAMXG00000042050	-	97	38.462	ENSORLG00015013406	-	98	38.462	Oryzias_latipes_hsok
ENSAMXG00000042050	-	99	43.171	ENSOMEG00000002638	-	99	43.171	Oryzias_melastigma
ENSAMXG00000042050	-	99	43.161	ENSOMEG00000015506	-	99	43.161	Oryzias_melastigma
ENSAMXG00000042050	-	57	44.295	ENSPKIG00000025483	-	96	44.295	Paramormyrops_kingsleyae
ENSAMXG00000042050	-	95	43.641	ENSPREG00000013866	-	94	43.641	Poecilia_reticulata
ENSAMXG00000042050	-	98	43.308	ENSXMAG00000026471	-	97	43.308	Xiphophorus_maculatus
ENSAMXG00000042050	-	80	44.871	ENSXMAG00000023070	-	92	44.871	Xiphophorus_maculatus