EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042073 (Gene tree)
Gene ID: 103027312
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11880 bases
Position: chr17:2980716-2992595
Accession: 103027312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048524	MMR_HSR1	PF01926.23	2.4e-07	1	1
ENSAMXP00000049387	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000035444	-	960	XM_007231095	ENSAMXP00000049387	205 (aa)	XP_007231157	W5KYF4
ENSAMXT00000032389	-	597	-	ENSAMXP00000048524	198 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042073	rab18b	79	35.294	ENSAMXG00000034227	rab32b	80	35.294
ENSAMXG00000042073	rab18b	81	34.337	ENSAMXG00000033907	hrasb	87	34.337
ENSAMXG00000042073	rab18b	81	35.928	ENSAMXG00000040611	rabl2	74	35.928
ENSAMXG00000042073	rab18b	95	45.641	ENSAMXG00000034850	-	96	45.641
ENSAMXG00000042073	rab18b	71	42.466	ENSAMXG00000040460	zgc:101559	60	42.466
ENSAMXG00000042073	rab18b	79	46.914	ENSAMXG00000042419	rab3c	74	46.914
ENSAMXG00000042073	rab18b	73	34.667	ENSAMXG00000010334	rras	79	35.404
ENSAMXG00000042073	rab18b	80	45.181	ENSAMXG00000024632	rab11al	80	45.181
ENSAMXG00000042073	rab18b	80	45.455	ENSAMXG00000037267	-	93	41.919
ENSAMXG00000042073	rab18b	81	34.337	ENSAMXG00000017217	kras	87	34.756
ENSAMXG00000042073	rab18b	79	45.062	ENSAMXG00000029712	rab25b	76	45.062
ENSAMXG00000042073	rab18b	92	43.077	ENSAMXG00000039865	rab35b	96	45.128
ENSAMXG00000042073	rab18b	80	50.000	ENSAMXG00000040604	-	89	46.277
ENSAMXG00000042073	rab18b	77	38.312	ENSAMXG00000017266	rab36	61	38.365
ENSAMXG00000042073	rab18b	80	38.323	ENSAMXG00000002254	-	81	38.323
ENSAMXG00000042073	rab18b	83	45.614	ENSAMXG00000003155	rab11a	79	45.614
ENSAMXG00000042073	rab18b	80	37.725	ENSAMXG00000032027	rab7a	81	37.725
ENSAMXG00000042073	rab18b	79	42.331	ENSAMXG00000004630	rab6ba	85	42.236
ENSAMXG00000042073	rab18b	91	43.915	ENSAMXG00000009640	rab14	87	43.915
ENSAMXG00000042073	rab18b	95	45.685	ENSAMXG00000032564	rab1ab	96	45.685
ENSAMXG00000042073	rab18b	85	37.912	ENSAMXG00000037428	-	82	38.506
ENSAMXG00000042073	rab18b	82	44.706	ENSAMXG00000043951	rab15	79	44.706
ENSAMXG00000042073	rab18b	93	39.378	ENSAMXG00000036179	rab5aa	89	39.378
ENSAMXG00000042073	rab18b	81	45.509	ENSAMXG00000030712	rab13	82	45.509
ENSAMXG00000042073	rab18b	79	31.325	ENSAMXG00000041488	dnajc27	61	31.325
ENSAMXG00000042073	rab18b	82	37.059	ENSAMXG00000033764	si:ch73-116o1.2	81	37.059
ENSAMXG00000042073	rab18b	74	32.051	ENSAMXG00000029130	-	82	32.051
ENSAMXG00000042073	rab18b	81	34.337	ENSAMXG00000035885	hrasa	87	34.337
ENSAMXG00000042073	rab18b	93	34.536	ENSAMXG00000026476	rab9b	87	34.536
ENSAMXG00000042073	rab18b	80	41.818	ENSAMXG00000032729	rab42a	77	41.818
ENSAMXG00000042073	rab18b	83	36.628	ENSAMXG00000014960	rab23	74	36.364
ENSAMXG00000042073	rab18b	87	48.889	ENSAMXG00000039486	zgc:171927	84	48.889
ENSAMXG00000042073	rab18b	73	34.437	ENSAMXG00000033390	rap1aa	77	34.437
ENSAMXG00000042073	rab18b	72	42.953	ENSAMXG00000033216	rab41	76	42.953
ENSAMXG00000042073	rab18b	79	38.690	ENSAMXG00000036330	RAB38	77	38.690
ENSAMXG00000042073	rab18b	79	49.390	ENSAMXG00000004882	rab12	66	49.390
ENSAMXG00000042073	rab18b	96	36.139	ENSAMXG00000032547	rab6a	95	36.139
ENSAMXG00000042073	rab18b	94	40.609	ENSAMXG00000035919	rab5ab	90	40.609
ENSAMXG00000042073	rab18b	83	40.462	ENSAMXG00000003717	rab39bb	81	40.462
ENSAMXG00000042073	rab18b	80	51.220	ENSAMXG00000009935	rab30	66	51.220
ENSAMXG00000042073	rab18b	83	40.462	ENSAMXG00000041657	rab39ba	81	40.462
ENSAMXG00000042073	rab18b	79	33.533	ENSAMXG00000033069	si:cabz01085950.1	81	33.533
ENSAMXG00000042073	rab18b	79	46.296	ENSAMXG00000040879	rab25a	75	46.296
ENSAMXG00000042073	rab18b	80	38.323	ENSAMXG00000031957	zgc:100918	81	38.323
ENSAMXG00000042073	rab18b	80	45.455	ENSAMXG00000043717	rab5c	90	42.289
ENSAMXG00000042073	rab18b	83	46.784	ENSAMXG00000037623	-	78	46.784
ENSAMXG00000042073	rab18b	82	36.471	ENSAMXG00000010919	mras	81	36.471
ENSAMXG00000042073	rab18b	81	42.604	ENSAMXG00000039737	RAB19	77	42.604
ENSAMXG00000042073	rab18b	80	34.146	ENSAMXG00000012327	nras	91	34.146
ENSAMXG00000042073	rab18b	92	47.423	ENSAMXG00000036772	rab2a	97	43.062
ENSAMXG00000042073	rab18b	93	35.714	ENSAMXG00000025889	RAB9A	96	35.714
ENSAMXG00000042073	rab18b	84	44.828	ENSAMXG00000038243	si:dkey-16l2.16	81	60.784
ENSAMXG00000042073	rab18b	93	38.144	ENSAMXG00000026059	RAB9A	97	38.144
ENSAMXG00000042073	rab18b	95	35.149	ENSAMXG00000032663	si:dkey-13a21.4	92	35.149
ENSAMXG00000042073	rab18b	83	46.199	ENSAMXG00000042655	rab11bb	78	46.199
ENSAMXG00000042073	rab18b	91	43.915	ENSAMXG00000040126	-	69	43.915
ENSAMXG00000042073	rab18b	82	43.787	ENSAMXG00000033470	RAB15	78	43.787
ENSAMXG00000042073	rab18b	93	45.361	ENSAMXG00000003547	rab1ba	87	45.361
ENSAMXG00000042073	rab18b	73	43.709	ENSAMXG00000040286	rab33ba	63	43.709
ENSAMXG00000042073	rab18b	79	30.909	ENSAMXG00000006018	rab34b	69	31.818
ENSAMXG00000042073	rab18b	80	43.636	ENSAMXG00000013054	rab22a	83	43.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042073	rab18b	100	87.379	ENSG00000099246	RAB18	100	92.063	Homo_sapiens
ENSAMXG00000042073	rab18b	99	87.255	ENSAPOG00000019881	rab18b	99	87.255	Acanthochromis_polyacanthus
ENSAMXG00000042073	rab18b	100	75.847	ENSAMEG00000015990	RAB18	100	75.847	Ailuropoda_melanoleuca
ENSAMXG00000042073	rab18b	99	88.235	ENSACIG00000008102	rab18b	99	88.235	Amphilophus_citrinellus
ENSAMXG00000042073	rab18b	99	87.255	ENSAOCG00000013479	rab18b	99	87.255	Amphiprion_ocellaris
ENSAMXG00000042073	rab18b	99	87.745	ENSAPEG00000022923	rab18b	99	87.745	Amphiprion_percula
ENSAMXG00000042073	rab18b	99	85.784	ENSATEG00000002952	rab18b	99	85.784	Anabas_testudineus
ENSAMXG00000042073	rab18b	100	87.379	ENSANAG00000035856	RAB18	100	87.379	Aotus_nancymaae
ENSAMXG00000042073	rab18b	99	87.745	ENSACLG00000015289	rab18b	99	87.745	Astatotilapia_calliptera
ENSAMXG00000042073	rab18b	100	87.379	ENSBTAG00000009871	RAB18	88	87.379	Bos_taurus
ENSAMXG00000042073	rab18b	100	84.951	ENSBTAG00000050873	-	100	84.951	Bos_taurus
ENSAMXG00000042073	rab18b	100	87.379	ENSCJAG00000045749	RAB18	100	87.379	Callithrix_jacchus
ENSAMXG00000042073	rab18b	100	86.893	ENSCAFG00020003253	RAB18	100	86.893	Canis_lupus_dingo
ENSAMXG00000042073	rab18b	100	87.379	ENSCHIG00000008749	RAB18	100	87.379	Capra_hircus
ENSAMXG00000042073	rab18b	100	86.893	ENSTSYG00000013092	RAB18	100	86.893	Carlito_syrichta
ENSAMXG00000042073	rab18b	100	86.893	ENSCPOG00000032827	RAB18	100	86.893	Cavia_porcellus
ENSAMXG00000042073	rab18b	100	87.379	ENSCCAG00000006762	RAB18	100	87.379	Cebus_capucinus
ENSAMXG00000042073	rab18b	100	87.379	ENSCATG00000009672	RAB18	100	87.379	Cercocebus_atys
ENSAMXG00000042073	rab18b	100	87.379	ENSCSAG00000011749	RAB18	100	87.379	Chlorocebus_sabaeus
ENSAMXG00000042073	rab18b	100	87.379	ENSCANG00000035397	RAB18	100	87.379	Colobus_angolensis_palliatus
ENSAMXG00000042073	rab18b	100	86.893	ENSCGRG00001017519	Rab18	100	86.893	Cricetulus_griseus_chok1gshd
ENSAMXG00000042073	rab18b	100	86.893	ENSCGRG00000017201	Rab18	100	86.893	Cricetulus_griseus_crigri
ENSAMXG00000042073	rab18b	94	88.542	ENSCSEG00000016803	rab18b	98	88.542	Cynoglossus_semilaevis
ENSAMXG00000042073	rab18b	100	95.122	ENSDARG00000098344	rab18b	100	95.122	Danio_rerio
ENSAMXG00000042073	rab18b	57	92.035	ENSDNOG00000038845	-	75	92.035	Dasypus_novemcinctus
ENSAMXG00000042073	rab18b	100	87.379	ENSDNOG00000047713	RAB18	100	87.379	Dasypus_novemcinctus
ENSAMXG00000042073	rab18b	85	85.057	ENSDORG00000029360	-	83	85.057	Dipodomys_ordii
ENSAMXG00000042073	rab18b	100	86.408	ENSDORG00000028596	-	100	86.408	Dipodomys_ordii
ENSAMXG00000042073	rab18b	100	86.893	ENSEASG00005007164	RAB18	100	86.893	Equus_asinus_asinus
ENSAMXG00000042073	rab18b	100	86.893	ENSECAG00000017521	RAB18	88	86.893	Equus_caballus
ENSAMXG00000042073	rab18b	99	90.244	ENSELUG00000016450	rab18b	99	90.244	Esox_lucius
ENSAMXG00000042073	rab18b	100	86.893	ENSFCAG00000027161	RAB18	100	86.893	Felis_catus
ENSAMXG00000042073	rab18b	94	89.062	ENSFALG00000007160	RAB18	100	86.473	Ficedula_albicollis
ENSAMXG00000042073	rab18b	99	85.294	ENSFHEG00000020035	rab18b	99	85.294	Fundulus_heteroclitus
ENSAMXG00000042073	rab18b	99	81.373	ENSGMOG00000016608	rab18b	99	81.373	Gadus_morhua
ENSAMXG00000042073	rab18b	100	87.864	ENSGALG00000007435	RAB18	100	87.864	Gallus_gallus
ENSAMXG00000042073	rab18b	99	86.829	ENSGAFG00000008560	rab18b	99	86.829	Gambusia_affinis
ENSAMXG00000042073	rab18b	99	86.275	ENSGACG00000016395	rab18b	99	86.275	Gasterosteus_aculeatus
ENSAMXG00000042073	rab18b	100	87.379	ENSGGOG00000008086	RAB18	100	87.379	Gorilla_gorilla
ENSAMXG00000042073	rab18b	99	87.745	ENSHBUG00000003696	rab18b	99	87.745	Haplochromis_burtoni
ENSAMXG00000042073	rab18b	100	86.893	ENSHGLG00000004365	RAB18	100	86.893	Heterocephalus_glaber_female
ENSAMXG00000042073	rab18b	99	73.529	ENSHGLG00000007301	-	95	73.529	Heterocephalus_glaber_female
ENSAMXG00000042073	rab18b	99	73.529	ENSHGLG00100009117	-	95	73.529	Heterocephalus_glaber_male
ENSAMXG00000042073	rab18b	100	86.893	ENSHGLG00100013089	-	100	86.893	Heterocephalus_glaber_male
ENSAMXG00000042073	rab18b	99	86.275	ENSHCOG00000002217	rab18b	99	86.275	Hippocampus_comes
ENSAMXG00000042073	rab18b	100	92.683	ENSIPUG00000010859	rab18b	100	92.683	Ictalurus_punctatus
ENSAMXG00000042073	rab18b	100	86.893	ENSSTOG00000014560	-	100	86.893	Ictidomys_tridecemlineatus
ENSAMXG00000042073	rab18b	99	85.784	ENSKMAG00000007364	rab18b	99	85.784	Kryptolebias_marmoratus
ENSAMXG00000042073	rab18b	99	86.765	ENSLBEG00000019428	rab18b	99	86.765	Labrus_bergylta
ENSAMXG00000042073	rab18b	100	76.585	ENSLACG00000011256	rab18b	100	76.585	Latimeria_chalumnae
ENSAMXG00000042073	rab18b	94	89.062	ENSLAFG00000015582	RAB18	100	86.893	Loxodonta_africana
ENSAMXG00000042073	rab18b	100	87.379	ENSMFAG00000006430	RAB18	100	87.379	Macaca_fascicularis
ENSAMXG00000042073	rab18b	100	85.922	ENSMMUG00000046971	RAB18	74	85.922	Macaca_mulatta
ENSAMXG00000042073	rab18b	100	87.379	ENSMNEG00000038180	RAB18	100	87.379	Macaca_nemestrina
ENSAMXG00000042073	rab18b	100	87.379	ENSMLEG00000033595	RAB18	100	87.379	Mandrillus_leucophaeus
ENSAMXG00000042073	rab18b	100	84.878	ENSMAMG00000018445	rab18b	100	84.878	Mastacembelus_armatus
ENSAMXG00000042073	rab18b	99	87.745	ENSMZEG00005008244	rab18b	99	87.745	Maylandia_zebra
ENSAMXG00000042073	rab18b	100	77.561	ENSMAUG00000020698	-	100	77.561	Mesocricetus_auratus
ENSAMXG00000042073	rab18b	94	89.062	ENSMICG00000017280	RAB18	100	86.893	Microcebus_murinus
ENSAMXG00000042073	rab18b	100	86.893	ENSMOCG00000013044	Rab18	100	86.893	Microtus_ochrogaster
ENSAMXG00000042073	rab18b	91	76.263	ENSMMOG00000017849	rab18b	99	75.000	Mola_mola
ENSAMXG00000042073	rab18b	100	77.073	ENSMODG00000024936	-	100	77.073	Monodelphis_domestica
ENSAMXG00000042073	rab18b	100	86.829	ENSMODG00000008253	RAB18	100	86.829	Monodelphis_domestica
ENSAMXG00000042073	rab18b	99	85.784	ENSMALG00000005069	rab18b	99	85.784	Monopterus_albus
ENSAMXG00000042073	rab18b	100	86.893	MGP_CAROLIEiJ_G0021978	Rab18	100	86.893	Mus_caroli
ENSAMXG00000042073	rab18b	100	86.893	ENSMUSG00000073639	Rab18	100	86.893	Mus_musculus
ENSAMXG00000042073	rab18b	100	86.893	MGP_PahariEiJ_G0018716	Rab18	100	86.893	Mus_pahari
ENSAMXG00000042073	rab18b	100	86.893	MGP_SPRETEiJ_G0022894	Rab18	100	86.893	Mus_spretus
ENSAMXG00000042073	rab18b	100	86.893	ENSMPUG00000010592	RAB18	100	86.893	Mustela_putorius_furo
ENSAMXG00000042073	rab18b	100	75.847	ENSMLUG00000027295	RAB18	100	75.847	Myotis_lucifugus
ENSAMXG00000042073	rab18b	100	86.893	ENSNGAG00000001465	Rab18	100	86.893	Nannospalax_galili
ENSAMXG00000042073	rab18b	99	87.745	ENSNBRG00000008137	rab18b	99	87.745	Neolamprologus_brichardi
ENSAMXG00000042073	rab18b	100	87.379	ENSNLEG00000016970	RAB18	100	87.379	Nomascus_leucogenys
ENSAMXG00000042073	rab18b	100	86.893	ENSODEG00000004150	-	100	86.893	Octodon_degus
ENSAMXG00000042073	rab18b	99	87.745	ENSONIG00000018673	rab18b	99	87.745	Oreochromis_niloticus
ENSAMXG00000042073	rab18b	91	91.979	ENSOANG00000021391	RAB18	100	87.379	Ornithorhynchus_anatinus
ENSAMXG00000042073	rab18b	100	86.408	ENSOCUG00000022307	RAB18	100	86.408	Oryctolagus_cuniculus
ENSAMXG00000042073	rab18b	99	85.784	ENSORLG00000009609	rab18b	99	85.784	Oryzias_latipes
ENSAMXG00000042073	rab18b	99	85.784	ENSORLG00020011590	rab18b	99	85.784	Oryzias_latipes_hni
ENSAMXG00000042073	rab18b	99	85.784	ENSORLG00015007182	rab18b	99	85.784	Oryzias_latipes_hsok
ENSAMXG00000042073	rab18b	99	85.784	ENSOMEG00000007546	rab18b	99	85.784	Oryzias_melastigma
ENSAMXG00000042073	rab18b	94	89.062	ENSOGAG00000028015	RAB18	100	86.893	Otolemur_garnettii
ENSAMXG00000042073	rab18b	100	87.379	ENSOARG00000016208	RAB18	100	87.379	Ovis_aries
ENSAMXG00000042073	rab18b	100	87.379	ENSPPAG00000041625	RAB18	100	87.379	Pan_paniscus
ENSAMXG00000042073	rab18b	100	86.893	ENSPPRG00000010314	RAB18	100	86.893	Panthera_pardus
ENSAMXG00000042073	rab18b	100	86.893	ENSPTIG00000011667	RAB18	100	86.893	Panthera_tigris_altaica
ENSAMXG00000042073	rab18b	100	87.379	ENSPTRG00000002384	RAB18	100	87.379	Pan_troglodytes
ENSAMXG00000042073	rab18b	100	87.379	ENSPANG00000023005	RAB18	100	87.379	Papio_anubis
ENSAMXG00000042073	rab18b	98	86.275	ENSPMAG00000005322	rab18b	98	86.275	Petromyzon_marinus
ENSAMXG00000042073	rab18b	100	86.829	ENSPCIG00000028705	-	88	86.829	Phascolarctos_cinereus
ENSAMXG00000042073	rab18b	99	86.275	ENSPFOG00000013491	rab18b	99	86.275	Poecilia_formosa
ENSAMXG00000042073	rab18b	99	86.275	ENSPLAG00000019136	rab18b	99	86.275	Poecilia_latipinna
ENSAMXG00000042073	rab18b	99	86.275	ENSPMEG00000008223	rab18b	99	86.275	Poecilia_mexicana
ENSAMXG00000042073	rab18b	100	87.379	ENSPPYG00000002172	RAB18	100	87.379	Pongo_abelii
ENSAMXG00000042073	rab18b	94	89.062	ENSPCOG00000018906	RAB18	100	86.893	Propithecus_coquereli
ENSAMXG00000042073	rab18b	99	87.745	ENSPNYG00000001751	rab18b	99	87.745	Pundamilia_nyererei
ENSAMXG00000042073	rab18b	100	96.585	ENSPNAG00000002404	rab18b	100	96.585	Pygocentrus_nattereri
ENSAMXG00000042073	rab18b	100	86.893	ENSRNOG00000018972	Rab18	100	86.893	Rattus_norvegicus
ENSAMXG00000042073	rab18b	100	86.893	ENSRBIG00000035948	RAB18	100	86.893	Rhinopithecus_bieti
ENSAMXG00000042073	rab18b	100	87.379	ENSRROG00000040563	RAB18	100	87.379	Rhinopithecus_roxellana
ENSAMXG00000042073	rab18b	100	87.317	ENSSHAG00000007613	RAB18	100	87.317	Sarcophilus_harrisii
ENSAMXG00000042073	rab18b	99	86.765	ENSSMAG00000011814	rab18b	99	86.765	Scophthalmus_maximus
ENSAMXG00000042073	rab18b	99	87.745	ENSSDUG00000005960	rab18b	99	87.745	Seriola_dumerili
ENSAMXG00000042073	rab18b	99	87.745	ENSSLDG00000006014	rab18b	99	87.745	Seriola_lalandi_dorsalis
ENSAMXG00000042073	rab18b	99	87.255	ENSSPAG00000020875	rab18b	99	87.255	Stegastes_partitus
ENSAMXG00000042073	rab18b	100	87.379	ENSSSCG00000028655	RAB18	100	87.379	Sus_scrofa
ENSAMXG00000042073	rab18b	94	78.082	ENSTGUG00000001105	-	100	76.496	Taeniopygia_guttata
ENSAMXG00000042073	rab18b	99	88.725	ENSTRUG00000004283	rab18b	99	88.725	Takifugu_rubripes
ENSAMXG00000042073	rab18b	99	88.780	ENSTNIG00000007882	rab18b	99	88.780	Tetraodon_nigroviridis
ENSAMXG00000042073	rab18b	100	86.893	ENSVVUG00000001705	RAB18	100	86.893	Vulpes_vulpes
ENSAMXG00000042073	rab18b	99	86.275	ENSXMAG00000006945	rab18b	99	86.275	Xiphophorus_maculatus