EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042119 (Gene tree)
Gene ID: 103023103
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6512 bases
Position: chr25:26747792-26754303
Accession: 103023103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048665	zf-C2H2	PF00096.26	1.5e-13	1	3
ENSAMXP00000048665	zf-C2H2	PF00096.26	1.5e-13	2	3
ENSAMXP00000048665	zf-C2H2	PF00096.26	1.5e-13	3	3
ENSAMXP00000048665	zf-met	PF12874.7	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054257	-	4306	XM_007234675	ENSAMXP00000048665	548 (aa)	XP_007234737	W5K635

Gene Model

Click here to download ENSAMXG00000042119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042119	zbtb18	52	40.541	ENSAMXG00000005882	znf131	62	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042119	zbtb18	99	71.695	ENSAPOG00000005168	zbtb18	99	73.051	Acanthochromis_polyacanthus
ENSAMXG00000042119	zbtb18	99	70.536	ENSACIG00000008655	zbtb18	99	71.071	Amphilophus_citrinellus
ENSAMXG00000042119	zbtb18	99	71.864	ENSAOCG00000014105	zbtb18	99	73.220	Amphiprion_ocellaris
ENSAMXG00000042119	zbtb18	99	71.164	ENSAPEG00000003817	zbtb18	78	72.850	Amphiprion_percula
ENSAMXG00000042119	zbtb18	99	73.083	ENSATEG00000010192	zbtb18	99	73.595	Anabas_testudineus
ENSAMXG00000042119	zbtb18	99	72.184	ENSACLG00000022978	zbtb18	98	73.038	Astatotilapia_calliptera
ENSAMXG00000042119	zbtb18	99	72.289	ENSCSEG00000003083	zbtb18	99	72.978	Cynoglossus_semilaevis
ENSAMXG00000042119	zbtb18	100	73.129	ENSCVAG00000016785	zbtb18	100	73.129	Cyprinodon_variegatus
ENSAMXG00000042119	zbtb18	98	90.909	ENSDARG00000028228	zbtb18	100	90.909	Danio_rerio
ENSAMXG00000042119	zbtb18	100	81.283	ENSELUG00000013471	zbtb18	100	81.283	Esox_lucius
ENSAMXG00000042119	zbtb18	99	71.795	ENSFHEG00000020005	zbtb18	99	73.333	Fundulus_heteroclitus
ENSAMXG00000042119	zbtb18	59	92.366	ENSGMOG00000018718	zbtb18	59	87.413	Gadus_morhua
ENSAMXG00000042119	zbtb18	100	72.743	ENSGAFG00000000619	zbtb18	100	72.743	Gambusia_affinis
ENSAMXG00000042119	zbtb18	99	72.125	ENSGACG00000010518	zbtb18	96	72.097	Gasterosteus_aculeatus
ENSAMXG00000042119	zbtb18	99	72.232	ENSHBUG00000013654	zbtb18	99	73.083	Haplochromis_burtoni
ENSAMXG00000042119	zbtb18	63	82.353	ENSHCOG00000002345	zbtb18	94	82.353	Hippocampus_comes
ENSAMXG00000042119	zbtb18	100	78.378	ENSIPUG00000008912	zbtb18	100	77.838	Ictalurus_punctatus
ENSAMXG00000042119	zbtb18	100	73.266	ENSKMAG00000002780	zbtb18	100	73.604	Kryptolebias_marmoratus
ENSAMXG00000042119	zbtb18	99	72.666	ENSLBEG00000014796	zbtb18	99	72.666	Labrus_bergylta
ENSAMXG00000042119	zbtb18	84	67.094	ENSMFAG00000033326	ZBTB18	100	66.525	Macaca_fascicularis
ENSAMXG00000042119	zbtb18	84	67.666	ENSMMUG00000015664	ZBTB18	100	67.171	Macaca_mulatta
ENSAMXG00000042119	zbtb18	99	72.109	ENSMAMG00000021720	zbtb18	99	73.469	Mastacembelus_armatus
ENSAMXG00000042119	zbtb18	99	72.232	ENSMZEG00005027394	zbtb18	99	73.083	Maylandia_zebra
ENSAMXG00000042119	zbtb18	94	54.932	ENSMGAG00000015389	-	100	54.159	Meleagris_gallopavo
ENSAMXG00000042119	zbtb18	98	71.914	ENSMMOG00000007888	zbtb18	99	72.143	Mola_mola
ENSAMXG00000042119	zbtb18	99	72.432	ENSMALG00000000725	zbtb18	99	72.432	Monopterus_albus
ENSAMXG00000042119	zbtb18	98	72.414	ENSNBRG00000013796	zbtb18	100	73.276	Neolamprologus_brichardi
ENSAMXG00000042119	zbtb18	99	72.061	ENSONIG00000000862	zbtb18	99	72.913	Oreochromis_niloticus
ENSAMXG00000042119	zbtb18	99	70.748	ENSORLG00000027425	zbtb18	98	72.109	Oryzias_latipes
ENSAMXG00000042119	zbtb18	99	70.918	ENSORLG00020011988	zbtb18	98	72.279	Oryzias_latipes_hni
ENSAMXG00000042119	zbtb18	99	71.380	ENSORLG00015017457	zbtb18	98	72.449	Oryzias_latipes_hsok
ENSAMXG00000042119	zbtb18	99	71.210	ENSOMEG00000011249	zbtb18	98	72.867	Oryzias_melastigma
ENSAMXG00000042119	zbtb18	99	81.982	ENSPKIG00000021964	zbtb18	96	81.982	Paramormyrops_kingsleyae
ENSAMXG00000042119	zbtb18	98	60.668	ENSPKIG00000008787	-	100	60.297	Paramormyrops_kingsleyae
ENSAMXG00000042119	zbtb18	98	73.370	ENSPMGG00000008020	zbtb18	100	73.237	Periophthalmus_magnuspinnatus
ENSAMXG00000042119	zbtb18	98	71.678	ENSPFOG00000022080	zbtb18	100	73.252	Poecilia_formosa
ENSAMXG00000042119	zbtb18	98	72.022	ENSPLAG00000011299	-	100	71.685	Poecilia_latipinna
ENSAMXG00000042119	zbtb18	98	72.022	ENSPLAG00000020960	zbtb18	100	71.685	Poecilia_latipinna
ENSAMXG00000042119	zbtb18	98	71.478	ENSPMEG00000007554	zbtb18	100	73.043	Poecilia_mexicana
ENSAMXG00000042119	zbtb18	100	72.913	ENSPREG00000008576	zbtb18	100	72.913	Poecilia_reticulata
ENSAMXG00000042119	zbtb18	99	72.232	ENSPNYG00000001530	zbtb18	99	73.083	Pundamilia_nyererei
ENSAMXG00000042119	zbtb18	89	93.196	ENSPNAG00000014066	zbtb18	89	93.277	Pygocentrus_nattereri
ENSAMXG00000042119	zbtb18	98	73.217	ENSSMAG00000018041	zbtb18	100	73.391	Scophthalmus_maximus
ENSAMXG00000042119	zbtb18	98	72.931	ENSSDUG00000018660	zbtb18	100	73.448	Seriola_dumerili
ENSAMXG00000042119	zbtb18	98	73.103	ENSSLDG00000022573	zbtb18	100	73.621	Seriola_lalandi_dorsalis
ENSAMXG00000042119	zbtb18	94	54.423	ENSSPUG00000010554	-	100	54.038	Sphenodon_punctatus
ENSAMXG00000042119	zbtb18	99	72.913	ENSSPAG00000002691	zbtb18	99	73.424	Stegastes_partitus
ENSAMXG00000042119	zbtb18	98	74.479	ENSTRUG00000020604	zbtb18	100	73.264	Takifugu_rubripes
ENSAMXG00000042119	zbtb18	99	75.309	ENSTNIG00000000430	zbtb18	99	74.823	Tetraodon_nigroviridis
ENSAMXG00000042119	zbtb18	98	72.563	ENSXCOG00000013308	zbtb18	100	72.563	Xiphophorus_couchianus
ENSAMXG00000042119	zbtb18	99	71.739	ENSXMAG00000018241	zbtb18	99	71.403	Xiphophorus_maculatus