EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042148 (Gene tree)
Gene ID: 103046444
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 35975 bases
Position: chr24:9723138-9759112
Accession: 103046444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041726	Nucleoplasmin	PF03066.15	4.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000036447	-	4790	XM_022683548	ENSAMXP00000041726	297 (aa)	XP_022539269	W5KEE4

Gene Model

Click here to download ENSAMXG00000042148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042148	npm1b	99	65.781	ENSAPOG00000004268	npm1b	98	65.116	Acanthochromis_polyacanthus
ENSAMXG00000042148	npm1b	99	65.000	ENSAOCG00000012549	npm1b	98	64.333	Amphiprion_ocellaris
ENSAMXG00000042148	npm1b	99	64.646	ENSAPEG00000000868	npm1b	98	63.973	Amphiprion_percula
ENSAMXG00000042148	npm1b	99	61.333	ENSATEG00000006254	npm1b	98	66.000	Anabas_testudineus
ENSAMXG00000042148	npm1b	96	42.808	ENSACAG00000015626	-	96	43.151	Anolis_carolinensis
ENSAMXG00000042148	npm1b	63	37.368	ENSCAFG00000023359	-	63	39.286	Canis_familiaris
ENSAMXG00000042148	npm1b	97	43.836	ENSCPBG00000021221	-	58	44.178	Chrysemys_picta_bellii
ENSAMXG00000042148	npm1b	99	59.197	ENSCSEG00000004530	npm1b	98	61.333	Cynoglossus_semilaevis
ENSAMXG00000042148	npm1b	99	60.726	ENSCVAG00000013016	npm1b	98	60.066	Cyprinodon_variegatus
ENSAMXG00000042148	npm1b	99	73.826	ENSDARG00000037675	npm1b	99	75.084	Danio_rerio
ENSAMXG00000042148	npm1b	99	64.537	ENSELUG00000022123	npm1b	98	64.217	Esox_lucius
ENSAMXG00000042148	npm1b	95	44.599	ENSFALG00000003320	-	94	44.056	Ficedula_albicollis
ENSAMXG00000042148	npm1b	99	61.111	ENSFHEG00000020794	npm1b	98	60.000	Fundulus_heteroclitus
ENSAMXG00000042148	npm1b	99	61.074	ENSGMOG00000002689	npm1b	99	60.403	Gadus_morhua
ENSAMXG00000042148	npm1b	97	45.548	ENSGALG00000002197	-	73	45.215	Gallus_gallus
ENSAMXG00000042148	npm1b	99	55.629	ENSGAFG00000017709	npm1b	98	58.609	Gambusia_affinis
ENSAMXG00000042148	npm1b	99	64.646	ENSGACG00000016706	npm1b	99	64.983	Gasterosteus_aculeatus
ENSAMXG00000042148	npm1b	97	42.517	ENSGAGG00000020250	-	96	42.466	Gopherus_agassizii
ENSAMXG00000042148	npm1b	99	61.716	ENSHBUG00000019903	npm1b	93	63.696	Haplochromis_burtoni
ENSAMXG00000042148	npm1b	99	59.732	ENSHCOG00000003895	npm1b	98	60.201	Hippocampus_comes
ENSAMXG00000042148	npm1b	100	79.070	ENSIPUG00000020165	npm1b	100	78.405	Ictalurus_punctatus
ENSAMXG00000042148	npm1b	99	62.252	ENSKMAG00000008260	npm1b	99	61.589	Kryptolebias_marmoratus
ENSAMXG00000042148	npm1b	92	42.667	ENSLACG00000001779	-	100	43.793	Latimeria_chalumnae
ENSAMXG00000042148	npm1b	96	35.836	ENSLACG00000013460	-	96	35.959	Latimeria_chalumnae
ENSAMXG00000042148	npm1b	94	50.338	ENSLOCG00000001942	npm1b	99	51.351	Lepisosteus_oculatus
ENSAMXG00000042148	npm1b	71	59.729	ENSMAMG00000015335	npm1b	98	58.824	Mastacembelus_armatus
ENSAMXG00000042148	npm1b	94	43.816	ENSMGAG00000001591	-	100	43.816	Meleagris_gallopavo
ENSAMXG00000042148	npm1b	80	62.140	ENSMALG00000015383	npm1b	98	62.195	Monopterus_albus
ENSAMXG00000042148	npm1b	99	61.356	ENSONIG00000001397	npm1b	98	61.149	Oreochromis_niloticus
ENSAMXG00000042148	npm1b	96	55.290	ENSOMEG00000003414	npm1b	95	55.363	Oryzias_melastigma
ENSAMXG00000042148	npm1b	99	59.547	ENSPKIG00000020050	npm1b	99	59.871	Paramormyrops_kingsleyae
ENSAMXG00000042148	npm1b	97	43.434	ENSPSIG00000011204	-	92	42.215	Pelodiscus_sinensis
ENSAMXG00000042148	npm1b	89	33.818	ENSPMAG00000004930	npm1b	99	34.146	Petromyzon_marinus
ENSAMXG00000042148	npm1b	99	61.056	ENSPFOG00000018357	npm1b	98	60.396	Poecilia_formosa
ENSAMXG00000042148	npm1b	100	84.175	ENSPNAG00000005498	npm1b	100	82.828	Pygocentrus_nattereri
ENSAMXG00000042148	npm1b	96	60.000	ENSSFOG00015005064	npm1b	97	59.794	Scleropages_formosus
ENSAMXG00000042148	npm1b	99	60.596	ENSSMAG00000008088	npm1b	98	60.726	Scophthalmus_maximus
ENSAMXG00000042148	npm1b	99	63.636	ENSSDUG00000007726	npm1b	98	65.217	Seriola_dumerili
ENSAMXG00000042148	npm1b	99	63.961	ENSSLDG00000021396	npm1b	98	65.552	Seriola_lalandi_dorsalis
ENSAMXG00000042148	npm1b	53	47.500	ENSSPUG00000015604	-	79	45.912	Sphenodon_punctatus
ENSAMXG00000042148	npm1b	99	61.074	ENSSPAG00000011152	npm1b	98	63.455	Stegastes_partitus
ENSAMXG00000042148	npm1b	94	42.657	ENSTGUG00000014970	-	100	43.007	Taeniopygia_guttata
ENSAMXG00000042148	npm1b	99	62.712	ENSTRUG00000008105	npm1b	94	62.712	Takifugu_rubripes
ENSAMXG00000042148	npm1b	99	59.596	ENSTNIG00000013057	npm1b	99	60.606	Tetraodon_nigroviridis
ENSAMXG00000042148	npm1b	99	43.492	ENSXETG00000008403	npm1	98	41.905	Xenopus_tropicalis
ENSAMXG00000042148	npm1b	99	59.406	ENSXMAG00000001986	npm1b	98	60.396	Xiphophorus_maculatus