EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042165 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5289 bases
Position: chr3:45403809-45409097
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000049439	zf-CCHC	PF00098.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030124	-	1101	-	ENSAMXP00000049439	366 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042165	-	73	83.643	ENSAMXG00000036244	-	82	77.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042165	-	55	32.039	ENSACAG00000022708	-	84	32.039	Anolis_carolinensis
ENSAMXG00000042165	-	54	30.049	ENSACAG00000025004	-	79	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	53	34.518	ENSACAG00000023848	-	79	34.518	Anolis_carolinensis
ENSAMXG00000042165	-	61	31.169	ENSACAG00000001206	-	91	31.169	Anolis_carolinensis
ENSAMXG00000042165	-	53	31.980	ENSACAG00000025381	-	80	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	57	31.455	ENSACAG00000026091	-	86	31.455	Anolis_carolinensis
ENSAMXG00000042165	-	54	30.049	ENSACAG00000022668	-	79	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	57	30.986	ENSACAG00000024362	-	89	30.047	Anolis_carolinensis
ENSAMXG00000042165	-	53	30.052	ENSACAG00000027590	-	76	30.052	Anolis_carolinensis
ENSAMXG00000042165	-	61	30.736	ENSACAG00000022428	-	89	30.736	Anolis_carolinensis
ENSAMXG00000042165	-	53	30.964	ENSACAG00000025751	-	78	32.487	Anolis_carolinensis
ENSAMXG00000042165	-	54	31.527	ENSACAG00000024750	-	79	32.487	Anolis_carolinensis
ENSAMXG00000042165	-	54	33.005	ENSACAG00000005423	-	89	33.005	Anolis_carolinensis
ENSAMXG00000042165	-	53	32.308	ENSACAG00000026449	-	79	32.308	Anolis_carolinensis
ENSAMXG00000042165	-	59	31.050	ENSACAG00000026110	-	85	30.000	Anolis_carolinensis
ENSAMXG00000042165	-	55	31.068	ENSACAG00000026661	-	86	30.986	Anolis_carolinensis
ENSAMXG00000042165	-	54	32.673	ENSACAG00000027875	-	81	32.673	Anolis_carolinensis
ENSAMXG00000042165	-	53	33.503	ENSACAG00000023852	-	79	33.503	Anolis_carolinensis
ENSAMXG00000042165	-	54	31.034	ENSACAG00000023834	-	87	31.313	Anolis_carolinensis
ENSAMXG00000042165	-	53	30.457	ENSACAG00000023214	-	78	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	54	30.049	ENSACAG00000027535	-	79	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	53	30.964	ENSACAG00000024773	-	86	30.594	Anolis_carolinensis
ENSAMXG00000042165	-	54	31.500	ENSACAG00000026203	-	81	31.500	Anolis_carolinensis
ENSAMXG00000042165	-	53	30.457	ENSACAG00000026734	-	78	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	61	30.303	ENSACAG00000028099	-	88	30.303	Anolis_carolinensis
ENSAMXG00000042165	-	54	31.034	ENSACAG00000022637	-	79	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	61	31.169	ENSACAG00000026136	-	91	31.169	Anolis_carolinensis
ENSAMXG00000042165	-	54	32.500	ENSACAG00000027109	-	81	32.500	Anolis_carolinensis
ENSAMXG00000042165	-	53	30.653	ENSACAG00000028040	-	79	30.653	Anolis_carolinensis
ENSAMXG00000042165	-	54	30.049	ENSACAG00000027418	-	79	31.980	Anolis_carolinensis
ENSAMXG00000042165	-	73	33.566	ENSFHEG00000001818	-	73	33.566	Fundulus_heteroclitus
ENSAMXG00000042165	-	84	32.075	ENSHBUG00000010718	-	90	32.803	Haplochromis_burtoni
ENSAMXG00000042165	-	89	32.335	ENSHCOG00000001473	-	91	32.335	Hippocampus_comes
ENSAMXG00000042165	-	54	35.149	ENSLOCG00000010704	-	99	35.149	Lepisosteus_oculatus
ENSAMXG00000042165	-	80	32.013	ENSMAMG00000007057	-	90	32.013	Mastacembelus_armatus
ENSAMXG00000042165	-	90	30.294	ENSMZEG00005021915	-	91	32.673	Maylandia_zebra
ENSAMXG00000042165	-	84	32.075	ENSMZEG00005007727	-	90	32.803	Maylandia_zebra
ENSAMXG00000042165	-	93	34.167	ENSORLG00000027391	-	90	34.167	Oryzias_latipes
ENSAMXG00000042165	-	89	34.234	ENSORLG00000029602	-	90	34.234	Oryzias_latipes
ENSAMXG00000042165	-	93	33.616	ENSORLG00000023496	-	99	33.616	Oryzias_latipes
ENSAMXG00000042165	-	89	32.653	ENSORLG00020001780	-	90	32.565	Oryzias_latipes_hni
ENSAMXG00000042165	-	83	31.613	ENSORLG00020007518	-	90	31.613	Oryzias_latipes_hni
ENSAMXG00000042165	-	87	33.739	ENSORLG00020020969	-	80	33.739	Oryzias_latipes_hni
ENSAMXG00000042165	-	84	32.515	ENSPREG00000001860	-	87	32.515	Poecilia_reticulata
ENSAMXG00000042165	-	67	56.855	ENSPNAG00000011784	-	84	56.855	Pygocentrus_nattereri
ENSAMXG00000042165	-	82	50.000	ENSPNAG00000026690	-	79	50.000	Pygocentrus_nattereri
ENSAMXG00000042165	-	80	47.782	ENSPNAG00000001406	-	88	47.782	Pygocentrus_nattereri