EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042320 (Gene tree)
Gene ID: 103036305
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 14435 bases
Position: chr7:29162786-29177220
Accession: 103036305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048429	RtcB	PF01139.17	1.2e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043948	-	4109	XM_007235055	ENSAMXP00000048429	505 (aa)	XP_007235117	UPI000BBDBF5A

Gene Model

Click here to download ENSAMXG00000042320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042320	rtcb	100	94.455	ENSG00000100220	RTCB	100	94.455	Homo_sapiens
ENSAMXG00000042320	rtcb	100	96.238	ENSAPOG00000006040	rtcb	100	96.238	Acanthochromis_polyacanthus
ENSAMXG00000042320	rtcb	100	94.653	ENSAMEG00000016152	RTCB	100	94.653	Ailuropoda_melanoleuca
ENSAMXG00000042320	rtcb	100	91.485	ENSACIG00000009083	rtcb	100	91.485	Amphilophus_citrinellus
ENSAMXG00000042320	rtcb	100	96.436	ENSAOCG00000005662	rtcb	100	96.957	Amphiprion_ocellaris
ENSAMXG00000042320	rtcb	96	91.581	ENSAPEG00000024653	rtcb	100	91.581	Amphiprion_percula
ENSAMXG00000042320	rtcb	100	96.436	ENSAPEG00000024701	rtcb	100	96.436	Amphiprion_percula
ENSAMXG00000042320	rtcb	100	96.238	ENSATEG00000000618	rtcb	100	96.238	Anabas_testudineus
ENSAMXG00000042320	rtcb	100	91.329	ENSACAG00000014817	RTCB	100	91.329	Anolis_carolinensis
ENSAMXG00000042320	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSAMXG00000042320	rtcb	100	79.406	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSAMXG00000042320	rtcb	100	94.851	ENSACLG00000008367	rtcb	100	95.652	Astatotilapia_calliptera
ENSAMXG00000042320	rtcb	100	94.653	ENSBTAG00000011070	RTCB	100	94.653	Bos_taurus
ENSAMXG00000042320	rtcb	100	73.465	WBGene00008877	rtcb-1	100	73.465	Caenorhabditis_elegans
ENSAMXG00000042320	rtcb	100	94.257	ENSCJAG00000006128	RTCB	100	94.257	Callithrix_jacchus
ENSAMXG00000042320	rtcb	100	94.653	ENSCAFG00000001785	RTCB	100	94.653	Canis_familiaris
ENSAMXG00000042320	rtcb	100	90.297	ENSCAFG00000010789	-	100	90.297	Canis_familiaris
ENSAMXG00000042320	rtcb	100	94.653	ENSCAFG00020004890	-	100	94.653	Canis_lupus_dingo
ENSAMXG00000042320	rtcb	87	90.455	ENSCAFG00020018953	-	99	90.455	Canis_lupus_dingo
ENSAMXG00000042320	rtcb	100	94.653	ENSCHIG00000027009	-	100	94.653	Capra_hircus
ENSAMXG00000042320	rtcb	100	94.653	ENSTSYG00000012320	RTCB	100	94.653	Carlito_syrichta
ENSAMXG00000042320	rtcb	94	94.130	ENSCAPG00000011647	RTCB	96	94.130	Cavia_aperea
ENSAMXG00000042320	rtcb	100	94.257	ENSCCAG00000000618	RTCB	100	94.257	Cebus_capucinus
ENSAMXG00000042320	rtcb	100	94.257	ENSCATG00000033424	RTCB	100	94.257	Cercocebus_atys
ENSAMXG00000042320	rtcb	100	94.455	ENSCLAG00000007997	RTCB	100	94.455	Chinchilla_lanigera
ENSAMXG00000042320	rtcb	100	94.059	ENSCSAG00000008351	RTCB	100	94.059	Chlorocebus_sabaeus
ENSAMXG00000042320	rtcb	100	80.396	ENSCHOG00000009123	RTCB	100	80.396	Choloepus_hoffmanni
ENSAMXG00000042320	rtcb	100	93.861	ENSCPBG00000023184	RTCB	100	93.861	Chrysemys_picta_bellii
ENSAMXG00000042320	rtcb	100	82.376	ENSCING00000003830	-	100	82.376	Ciona_intestinalis
ENSAMXG00000042320	rtcb	100	82.772	ENSCSAVG00000008124	-	100	82.005	Ciona_savignyi
ENSAMXG00000042320	rtcb	100	90.693	ENSCANG00000001891	RTCB	100	90.693	Colobus_angolensis_palliatus
ENSAMXG00000042320	rtcb	100	94.455	ENSCGRG00001011173	Rtcb	100	94.455	Cricetulus_griseus_chok1gshd
ENSAMXG00000042320	rtcb	93	94.480	ENSCGRG00000009587	-	96	94.480	Cricetulus_griseus_crigri
ENSAMXG00000042320	rtcb	100	95.248	ENSCSEG00000003986	rtcb	100	95.248	Cynoglossus_semilaevis
ENSAMXG00000042320	rtcb	81	95.366	ENSCVAG00000000569	rtcb	93	95.366	Cyprinodon_variegatus
ENSAMXG00000042320	rtcb	100	96.832	ENSDARG00000101047	rtcb	100	96.832	Danio_rerio
ENSAMXG00000042320	rtcb	80	90.663	ENSDNOG00000012425	RTCB	99	90.663	Dasypus_novemcinctus
ENSAMXG00000042320	rtcb	100	94.653	ENSDORG00000010855	Rtcb	100	94.653	Dipodomys_ordii
ENSAMXG00000042320	rtcb	99	83.897	FBgn0032781	RtcB	99	83.897	Drosophila_melanogaster
ENSAMXG00000042320	rtcb	100	88.515	ENSETEG00000001988	RTCB	100	88.515	Echinops_telfairi
ENSAMXG00000042320	rtcb	100	86.535	ENSEBUG00000014235	rtcb	100	86.535	Eptatretus_burgeri
ENSAMXG00000042320	rtcb	100	94.653	ENSEASG00005019059	RTCB	100	94.653	Equus_asinus_asinus
ENSAMXG00000042320	rtcb	100	94.653	ENSECAG00000023998	RTCB	100	94.653	Equus_caballus
ENSAMXG00000042320	rtcb	88	85.202	ENSEEUG00000006251	RTCB	99	85.202	Erinaceus_europaeus
ENSAMXG00000042320	rtcb	100	84.310	ENSELUG00000009275	rtcb	100	84.310	Esox_lucius
ENSAMXG00000042320	rtcb	100	94.455	ENSFCAG00000026480	RTCB	100	94.455	Felis_catus
ENSAMXG00000042320	rtcb	100	95.248	ENSFALG00000013334	RTCB	100	95.248	Ficedula_albicollis
ENSAMXG00000042320	rtcb	100	94.257	ENSFDAG00000018150	RTCB	100	94.257	Fukomys_damarensis
ENSAMXG00000042320	rtcb	100	95.248	ENSFHEG00000009595	rtcb	100	95.248	Fundulus_heteroclitus
ENSAMXG00000042320	rtcb	100	94.455	ENSGMOG00000018882	rtcb	100	94.455	Gadus_morhua
ENSAMXG00000042320	rtcb	100	94.851	ENSGALG00000012611	RTCB	100	94.851	Gallus_gallus
ENSAMXG00000042320	rtcb	100	95.050	ENSGAFG00000004198	rtcb	100	95.050	Gambusia_affinis
ENSAMXG00000042320	rtcb	100	95.842	ENSGACG00000000586	rtcb	100	95.842	Gasterosteus_aculeatus
ENSAMXG00000042320	rtcb	93	92.766	ENSGAGG00000019133	RTCB	98	92.766	Gopherus_agassizii
ENSAMXG00000042320	rtcb	100	94.455	ENSGGOG00000011402	RTCB	100	94.455	Gorilla_gorilla
ENSAMXG00000042320	rtcb	100	94.851	ENSHBUG00000020571	rtcb	100	94.851	Haplochromis_burtoni
ENSAMXG00000042320	rtcb	100	94.257	ENSHGLG00000004492	RTCB	100	94.257	Heterocephalus_glaber_female
ENSAMXG00000042320	rtcb	93	68.017	ENSHGLG00000001066	-	99	68.017	Heterocephalus_glaber_female
ENSAMXG00000042320	rtcb	100	94.257	ENSHGLG00100008965	RTCB	100	94.257	Heterocephalus_glaber_male
ENSAMXG00000042320	rtcb	100	92.899	ENSHCOG00000006450	rtcb	100	92.899	Hippocampus_comes
ENSAMXG00000042320	rtcb	100	97.030	ENSIPUG00000015443	rtcb	100	97.030	Ictalurus_punctatus
ENSAMXG00000042320	rtcb	100	94.257	ENSSTOG00000003878	RTCB	100	94.257	Ictidomys_tridecemlineatus
ENSAMXG00000042320	rtcb	100	94.653	ENSJJAG00000010667	Rtcb	100	94.653	Jaculus_jaculus
ENSAMXG00000042320	rtcb	100	95.248	ENSKMAG00000013178	rtcb	100	95.248	Kryptolebias_marmoratus
ENSAMXG00000042320	rtcb	100	94.455	ENSLBEG00000000214	rtcb	100	94.455	Labrus_bergylta
ENSAMXG00000042320	rtcb	100	95.644	ENSLBEG00000010566	RTCB	100	95.644	Labrus_bergylta
ENSAMXG00000042320	rtcb	100	94.257	ENSLACG00000013033	RTCB	100	94.257	Latimeria_chalumnae
ENSAMXG00000042320	rtcb	100	96.634	ENSLOCG00000016515	rtcb	99	96.634	Lepisosteus_oculatus
ENSAMXG00000042320	rtcb	100	94.059	ENSLAFG00000002082	RTCB	100	94.059	Loxodonta_africana
ENSAMXG00000042320	rtcb	100	94.059	ENSMFAG00000034419	RTCB	100	94.059	Macaca_fascicularis
ENSAMXG00000042320	rtcb	100	94.059	ENSMMUG00000006720	RTCB	100	94.059	Macaca_mulatta
ENSAMXG00000042320	rtcb	100	94.059	ENSMNEG00000040669	RTCB	100	94.059	Macaca_nemestrina
ENSAMXG00000042320	rtcb	100	94.257	ENSMLEG00000040505	RTCB	100	94.257	Mandrillus_leucophaeus
ENSAMXG00000042320	rtcb	100	96.040	ENSMAMG00000020676	rtcb	100	96.040	Mastacembelus_armatus
ENSAMXG00000042320	rtcb	100	94.851	ENSMZEG00005018942	rtcb	100	94.851	Maylandia_zebra
ENSAMXG00000042320	rtcb	100	94.477	ENSMGAG00000012805	RTCB	100	94.477	Meleagris_gallopavo
ENSAMXG00000042320	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSAMXG00000042320	rtcb	100	75.446	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSAMXG00000042320	rtcb	100	94.257	ENSMICG00000013303	-	100	94.257	Microcebus_murinus
ENSAMXG00000042320	rtcb	100	94.851	ENSMOCG00000002440	Rtcb	100	94.851	Microtus_ochrogaster
ENSAMXG00000042320	rtcb	100	95.644	ENSMMOG00000005987	rtcb	100	95.644	Mola_mola
ENSAMXG00000042320	rtcb	100	94.851	ENSMODG00000001414	RTCB	100	94.851	Monodelphis_domestica
ENSAMXG00000042320	rtcb	100	95.644	ENSMALG00000007603	rtcb	100	95.644	Monopterus_albus
ENSAMXG00000042320	rtcb	100	94.455	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.455	Mus_caroli
ENSAMXG00000042320	rtcb	100	94.455	ENSMUSG00000001783	Rtcb	100	94.455	Mus_musculus
ENSAMXG00000042320	rtcb	100	94.455	MGP_PahariEiJ_G0031396	Rtcb	100	94.455	Mus_pahari
ENSAMXG00000042320	rtcb	100	94.455	MGP_SPRETEiJ_G0016507	Rtcb	100	94.455	Mus_spretus
ENSAMXG00000042320	rtcb	100	94.653	ENSMPUG00000012285	RTCB	100	94.653	Mustela_putorius_furo
ENSAMXG00000042320	rtcb	100	91.519	ENSMLUG00000007803	RTCB	100	91.519	Myotis_lucifugus
ENSAMXG00000042320	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSAMXG00000042320	rtcb	100	95.050	ENSNBRG00000017202	rtcb	100	95.050	Neolamprologus_brichardi
ENSAMXG00000042320	rtcb	100	94.455	ENSNLEG00000004960	RTCB	100	94.455	Nomascus_leucogenys
ENSAMXG00000042320	rtcb	100	71.287	ENSMEUG00000007809	-	100	71.287	Notamacropus_eugenii
ENSAMXG00000042320	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSAMXG00000042320	rtcb	85	88.618	ENSODEG00000013033	-	100	88.618	Octodon_degus
ENSAMXG00000042320	rtcb	100	62.772	ENSODEG00000005042	-	100	62.772	Octodon_degus
ENSAMXG00000042320	rtcb	100	95.644	ENSONIG00000007474	rtcb	100	95.644	Oreochromis_niloticus
ENSAMXG00000042320	rtcb	100	94.653	ENSOANG00000005524	RTCB	100	94.653	Ornithorhynchus_anatinus
ENSAMXG00000042320	rtcb	93	94.255	ENSOCUG00000008270	RTCB	96	94.255	Oryctolagus_cuniculus
ENSAMXG00000042320	rtcb	100	95.050	ENSORLG00000020093	rtcb	100	95.050	Oryzias_latipes
ENSAMXG00000042320	rtcb	100	95.050	ENSORLG00020003706	rtcb	100	95.050	Oryzias_latipes_hni
ENSAMXG00000042320	rtcb	100	95.248	ENSORLG00015002968	rtcb	100	95.248	Oryzias_latipes_hsok
ENSAMXG00000042320	rtcb	100	95.050	ENSOMEG00000021278	rtcb	100	95.050	Oryzias_melastigma
ENSAMXG00000042320	rtcb	100	93.663	ENSOGAG00000001425	RTCB	100	93.663	Otolemur_garnettii
ENSAMXG00000042320	rtcb	100	94.653	ENSOARG00000018008	RTCB	100	94.653	Ovis_aries
ENSAMXG00000042320	rtcb	100	94.455	ENSPPAG00000028667	RTCB	100	94.455	Pan_paniscus
ENSAMXG00000042320	rtcb	100	94.455	ENSPPRG00000004038	RTCB	100	94.455	Panthera_pardus
ENSAMXG00000042320	rtcb	94	90.105	ENSPTIG00000020499	RTCB	97	91.158	Panthera_tigris_altaica
ENSAMXG00000042320	rtcb	100	94.455	ENSPTRG00000014287	RTCB	100	94.455	Pan_troglodytes
ENSAMXG00000042320	rtcb	100	94.059	ENSPANG00000016035	RTCB	100	94.059	Papio_anubis
ENSAMXG00000042320	rtcb	100	97.030	ENSPKIG00000001881	rtcb	100	97.030	Paramormyrops_kingsleyae
ENSAMXG00000042320	rtcb	91	94.130	ENSPSIG00000011690	RTCB	100	94.130	Pelodiscus_sinensis
ENSAMXG00000042320	rtcb	100	95.842	ENSPMGG00000016672	rtcb	100	95.842	Periophthalmus_magnuspinnatus
ENSAMXG00000042320	rtcb	100	94.455	ENSPEMG00000019548	Rtcb	100	94.455	Peromyscus_maniculatus_bairdii
ENSAMXG00000042320	rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSAMXG00000042320	rtcb	100	94.851	ENSPCIG00000009467	RTCB	100	94.851	Phascolarctos_cinereus
ENSAMXG00000042320	rtcb	100	95.446	ENSPFOG00000003058	rtcb	100	95.446	Poecilia_formosa
ENSAMXG00000042320	rtcb	100	95.644	ENSPLAG00000017663	rtcb	100	95.644	Poecilia_latipinna
ENSAMXG00000042320	rtcb	100	95.446	ENSPMEG00000006227	rtcb	100	95.446	Poecilia_mexicana
ENSAMXG00000042320	rtcb	100	95.248	ENSPREG00000018467	rtcb	100	95.248	Poecilia_reticulata
ENSAMXG00000042320	rtcb	100	94.455	ENSPPYG00000011752	RTCB	100	94.455	Pongo_abelii
ENSAMXG00000042320	rtcb	93	77.966	ENSPCAG00000013641	RTCB	100	77.966	Procavia_capensis
ENSAMXG00000042320	rtcb	100	94.257	ENSPCOG00000017243	RTCB	100	94.257	Propithecus_coquereli
ENSAMXG00000042320	rtcb	93	93.617	ENSPVAG00000002380	RTCB	100	93.617	Pteropus_vampyrus
ENSAMXG00000042320	rtcb	100	94.851	ENSPNYG00000022760	rtcb	100	94.851	Pundamilia_nyererei
ENSAMXG00000042320	rtcb	100	98.218	ENSPNAG00000009209	rtcb	100	98.218	Pygocentrus_nattereri
ENSAMXG00000042320	rtcb	100	94.455	ENSRNOG00000004813	Rtcb	100	94.455	Rattus_norvegicus
ENSAMXG00000042320	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSAMXG00000042320	rtcb	100	89.703	ENSSBOG00000020085	-	100	89.703	Saimiri_boliviensis_boliviensis
ENSAMXG00000042320	rtcb	94	94.726	ENSSHAG00000016277	RTCB	100	94.726	Sarcophilus_harrisii
ENSAMXG00000042320	rtcb	100	94.455	ENSSFOG00015011572	RTCB	100	94.455	Scleropages_formosus
ENSAMXG00000042320	rtcb	100	95.248	ENSSFOG00015000763	rtcb	100	95.248	Scleropages_formosus
ENSAMXG00000042320	rtcb	100	93.861	ENSSMAG00000005096	rtcb	100	93.861	Scophthalmus_maximus
ENSAMXG00000042320	rtcb	100	95.446	ENSSDUG00000012605	rtcb	100	95.446	Seriola_dumerili
ENSAMXG00000042320	rtcb	100	95.248	ENSSLDG00000019458	rtcb	100	95.248	Seriola_lalandi_dorsalis
ENSAMXG00000042320	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSAMXG00000042320	rtcb	100	93.861	ENSSPUG00000012814	RTCB	100	93.861	Sphenodon_punctatus
ENSAMXG00000042320	rtcb	100	96.436	ENSSPAG00000004623	rtcb	100	96.436	Stegastes_partitus
ENSAMXG00000042320	rtcb	100	94.455	ENSSSCG00000000158	RTCB	100	94.455	Sus_scrofa
ENSAMXG00000042320	rtcb	100	95.248	ENSTGUG00000010947	RTCB	99	95.248	Taeniopygia_guttata
ENSAMXG00000042320	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSAMXG00000042320	rtcb	100	94.455	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSAMXG00000042320	rtcb	100	81.386	ENSTBEG00000004418	RTCB	100	81.386	Tupaia_belangeri
ENSAMXG00000042320	rtcb	93	93.404	ENSTTRG00000006417	RTCB	100	93.404	Tursiops_truncatus
ENSAMXG00000042320	rtcb	100	94.653	ENSUAMG00000022792	RTCB	100	94.653	Ursus_americanus
ENSAMXG00000042320	rtcb	100	94.653	ENSUMAG00000017225	RTCB	100	94.653	Ursus_maritimus
ENSAMXG00000042320	rtcb	100	94.257	ENSVPAG00000005375	RTCB	100	94.257	Vicugna_pacos
ENSAMXG00000042320	rtcb	100	94.653	ENSVVUG00000023408	RTCB	100	94.840	Vulpes_vulpes
ENSAMXG00000042320	rtcb	100	93.663	ENSXETG00000011523	rtcb	100	93.663	Xenopus_tropicalis
ENSAMXG00000042320	rtcb	100	95.050	ENSXMAG00000002855	rtcb	100	95.050	Xiphophorus_maculatus