EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042321 (Gene tree)
Gene ID: 111195219
Gene Symbol: PNPT1
Alias: DFNB70|OLD35|PNPase|old-35
Full Name: polyribonucleotide nucleotidyltransferase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 12478 bases
Position: chr21:11597550-11610027
Accession: 111195219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034072	KH_1	PF00013.29	1.4e-06	1	1
ENSAMXP00000034072	RNase_PH	PF01138.21	1.4e-41	1	2
ENSAMXP00000034072	RNase_PH	PF01138.21	1.4e-41	2	2
ENSAMXP00000034072	RNase_PH_C	PF03725.15	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000050811	PNPT1-201	2175	XM_022681878	ENSAMXP00000034072	724 (aa)	XP_022537599	-

Gene Model

Click here to download ENSAMXG00000042321's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042321	PNPT1	99	78.947	ENSG00000138035	PNPT1	91	78.947	Homo_sapiens
ENSAMXG00000042321	PNPT1	99	82.490	ENSAPOG00000005581	PNPT1	98	81.215	Acanthochromis_polyacanthus
ENSAMXG00000042321	PNPT1	99	79.115	ENSAMEG00000003772	PNPT1	91	79.115	Ailuropoda_melanoleuca
ENSAMXG00000042321	PNPT1	99	83.126	ENSACIG00000010140	PNPT1	99	83.126	Amphilophus_citrinellus
ENSAMXG00000042321	PNPT1	99	83.241	ENSAOCG00000020109	PNPT1	93	83.241	Amphiprion_ocellaris
ENSAMXG00000042321	PNPT1	99	81.250	ENSAPEG00000002299	PNPT1	96	81.250	Amphiprion_percula
ENSAMXG00000042321	PNPT1	99	83.862	ENSATEG00000011164	PNPT1	93	83.862	Anabas_testudineus
ENSAMXG00000042321	PNPT1	99	77.155	ENSAPLG00000002885	PNPT1	99	77.155	Anas_platyrhynchos
ENSAMXG00000042321	PNPT1	99	81.440	ENSACAG00000003692	PNPT1	90	81.440	Anolis_carolinensis
ENSAMXG00000042321	PNPT1	99	79.132	ENSANAG00000023709	PNPT1	91	79.132	Aotus_nancymaae
ENSAMXG00000042321	PNPT1	99	84.116	ENSACLG00000024267	PNPT1	93	84.116	Astatotilapia_calliptera
ENSAMXG00000042321	PNPT1	99	77.839	ENSBTAG00000008909	PNPT1	92	77.624	Bos_taurus
ENSAMXG00000042321	PNPT1	96	41.202	WBGene00015266	BE0003N10.1	93	41.202	Caenorhabditis_elegans
ENSAMXG00000042321	PNPT1	99	78.670	ENSCJAG00000009740	PNPT1	91	78.670	Callithrix_jacchus
ENSAMXG00000042321	PNPT1	98	74.586	ENSCAFG00000002891	PNPT1	91	74.586	Canis_familiaris
ENSAMXG00000042321	PNPT1	99	79.501	ENSCAFG00020026841	PNPT1	91	79.501	Canis_lupus_dingo
ENSAMXG00000042321	PNPT1	99	76.471	ENSCHIG00000025034	PNPT1	91	76.257	Capra_hircus
ENSAMXG00000042321	PNPT1	99	78.809	ENSTSYG00000006536	PNPT1	91	78.809	Carlito_syrichta
ENSAMXG00000042321	PNPT1	99	63.547	ENSCAPG00000013300	PNPT1	98	64.607	Cavia_aperea
ENSAMXG00000042321	PNPT1	99	78.947	ENSCPOG00000011008	PNPT1	91	78.947	Cavia_porcellus
ENSAMXG00000042321	PNPT1	99	78.393	ENSCCAG00000037909	PNPT1	91	78.393	Cebus_capucinus
ENSAMXG00000042321	PNPT1	99	60.754	ENSCATG00000036442	-	93	60.754	Cercocebus_atys
ENSAMXG00000042321	PNPT1	99	78.116	ENSCATG00000031551	PNPT1	91	78.116	Cercocebus_atys
ENSAMXG00000042321	PNPT1	99	79.501	ENSCLAG00000006240	PNPT1	91	79.501	Chinchilla_lanigera
ENSAMXG00000042321	PNPT1	99	79.391	ENSCSAG00000014324	PNPT1	92	78.689	Chlorocebus_sabaeus
ENSAMXG00000042321	PNPT1	99	67.590	ENSCHOG00000007360	PNPT1	99	66.894	Choloepus_hoffmanni
ENSAMXG00000042321	PNPT1	99	79.861	ENSCPBG00000020856	PNPT1	90	79.861	Chrysemys_picta_bellii
ENSAMXG00000042321	PNPT1	99	63.866	ENSCANG00000028159	-	93	63.725	Colobus_angolensis_palliatus
ENSAMXG00000042321	PNPT1	99	79.006	ENSCANG00000034019	PNPT1	92	79.006	Colobus_angolensis_palliatus
ENSAMXG00000042321	PNPT1	99	77.285	ENSCGRG00001012245	Pnpt1	92	76.431	Cricetulus_griseus_chok1gshd
ENSAMXG00000042321	PNPT1	99	77.147	ENSCGRG00000007624	Pnpt1	93	76.294	Cricetulus_griseus_crigri
ENSAMXG00000042321	PNPT1	98	78.225	ENSCSEG00000000809	PNPT1	99	78.225	Cynoglossus_semilaevis
ENSAMXG00000042321	PNPT1	86	86.331	ENSCVAG00000010037	PNPT1	99	86.331	Cyprinodon_variegatus
ENSAMXG00000042321	PNPT1	99	79.363	ENSDNOG00000046753	PNPT1	93	78.474	Dasypus_novemcinctus
ENSAMXG00000042321	PNPT1	99	78.809	ENSDORG00000011409	Pnpt1	93	77.929	Dipodomys_ordii
ENSAMXG00000042321	PNPT1	98	56.338	FBgn0039846	PNPase	92	56.338	Drosophila_melanogaster
ENSAMXG00000042321	PNPT1	95	61.905	ENSETEG00000001582	-	88	61.905	Echinops_telfairi
ENSAMXG00000042321	PNPT1	99	55.216	ENSEBUG00000010305	PNPT1	94	55.076	Eptatretus_burgeri
ENSAMXG00000042321	PNPT1	99	78.809	ENSEASG00005001974	PNPT1	91	78.591	Equus_asinus_asinus
ENSAMXG00000042321	PNPT1	99	78.809	ENSECAG00000020058	PNPT1	97	78.390	Equus_caballus
ENSAMXG00000042321	PNPT1	99	69.848	ENSEEUG00000015610	PNPT1	93	69.116	Erinaceus_europaeus
ENSAMXG00000042321	PNPT1	99	83.541	ENSELUG00000004795	PNPT1	93	83.569	Esox_lucius
ENSAMXG00000042321	PNPT1	99	79.640	ENSFCAG00000013236	PNPT1	91	79.640	Felis_catus
ENSAMXG00000042321	PNPT1	99	77.285	ENSFALG00000011214	PNPT1	98	77.285	Ficedula_albicollis
ENSAMXG00000042321	PNPT1	99	77.839	ENSFDAG00000017446	PNPT1	92	77.839	Fukomys_damarensis
ENSAMXG00000042321	PNPT1	99	83.956	ENSFHEG00000006495	PNPT1	98	83.956	Fundulus_heteroclitus
ENSAMXG00000042321	PNPT1	99	81.956	ENSGMOG00000006805	PNPT1	94	81.956	Gadus_morhua
ENSAMXG00000042321	PNPT1	99	77.428	ENSGALG00000043545	PNPT1	91	77.428	Gallus_gallus
ENSAMXG00000042321	PNPT1	99	83.978	ENSGAFG00000019681	PNPT1	98	83.889	Gambusia_affinis
ENSAMXG00000042321	PNPT1	99	81.868	ENSGACG00000010840	PNPT1	94	81.868	Gasterosteus_aculeatus
ENSAMXG00000042321	PNPT1	99	79.086	ENSGGOG00000006867	PNPT1	91	79.086	Gorilla_gorilla
ENSAMXG00000042321	PNPT1	99	65.512	ENSGGOG00000041496	-	91	65.512	Gorilla_gorilla
ENSAMXG00000042321	PNPT1	99	84.211	ENSHBUG00000013041	PNPT1	93	84.211	Haplochromis_burtoni
ENSAMXG00000042321	PNPT1	88	74.074	ENSHGLG00000010054	-	89	74.074	Heterocephalus_glaber_female
ENSAMXG00000042321	PNPT1	98	79.196	ENSHGLG00000007480	PNPT1	91	79.196	Heterocephalus_glaber_female
ENSAMXG00000042321	PNPT1	98	79.196	ENSHGLG00100010920	PNPT1	91	79.196	Heterocephalus_glaber_male
ENSAMXG00000042321	PNPT1	98	70.827	ENSHGLG00100007397	-	93	70.827	Heterocephalus_glaber_male
ENSAMXG00000042321	PNPT1	98	71.148	ENSHCOG00000002817	PNPT1	97	71.148	Hippocampus_comes
ENSAMXG00000042321	PNPT1	99	83.311	ENSIPUG00000014624	PNPT1	99	83.311	Ictalurus_punctatus
ENSAMXG00000042321	PNPT1	99	78.112	ENSSTOG00000006304	PNPT1	92	78.112	Ictidomys_tridecemlineatus
ENSAMXG00000042321	PNPT1	99	78.255	ENSJJAG00000019227	Pnpt1	93	77.384	Jaculus_jaculus
ENSAMXG00000042321	PNPT1	99	81.655	ENSKMAG00000017389	PNPT1	97	78.207	Kryptolebias_marmoratus
ENSAMXG00000042321	PNPT1	99	82.825	ENSLBEG00000027692	PNPT1	96	82.773	Labrus_bergylta
ENSAMXG00000042321	PNPT1	97	78.631	ENSLACG00000011059	PNPT1	99	79.828	Latimeria_chalumnae
ENSAMXG00000042321	PNPT1	99	85.694	ENSLOCG00000015375	PNPT1	90	85.694	Lepisosteus_oculatus
ENSAMXG00000042321	PNPT1	99	74.965	ENSLAFG00000021462	PNPT1	91	74.965	Loxodonta_africana
ENSAMXG00000042321	PNPT1	99	79.501	ENSMFAG00000001927	PNPT1	92	78.796	Macaca_fascicularis
ENSAMXG00000042321	PNPT1	84	81.443	ENSMMUG00000007003	PNPT1	98	81.443	Macaca_mulatta
ENSAMXG00000042321	PNPT1	99	79.501	ENSMNEG00000038589	PNPT1	98	79.501	Macaca_nemestrina
ENSAMXG00000042321	PNPT1	99	59.637	ENSMLEG00000028524	-	92	60.335	Mandrillus_leucophaeus
ENSAMXG00000042321	PNPT1	99	75.900	ENSMLEG00000038706	PNPT1	91	75.900	Mandrillus_leucophaeus
ENSAMXG00000042321	PNPT1	99	81.058	ENSMAMG00000021954	PNPT1	94	81.058	Mastacembelus_armatus
ENSAMXG00000042321	PNPT1	99	84.116	ENSMZEG00005027363	PNPT1	93	84.116	Maylandia_zebra
ENSAMXG00000042321	PNPT1	99	77.155	ENSMGAG00000001952	PNPT1	99	77.155	Meleagris_gallopavo
ENSAMXG00000042321	PNPT1	99	77.978	ENSMAUG00000013652	Pnpt1	91	77.978	Mesocricetus_auratus
ENSAMXG00000042321	PNPT1	99	77.975	ENSMICG00000009369	PNPT1	92	77.975	Microcebus_murinus
ENSAMXG00000042321	PNPT1	99	77.424	ENSMOCG00000002820	Pnpt1	92	76.607	Microtus_ochrogaster
ENSAMXG00000042321	PNPT1	98	79.530	ENSMMOG00000007480	PNPT1	99	79.530	Mola_mola
ENSAMXG00000042321	PNPT1	99	79.230	ENSMODG00000001984	PNPT1	93	78.747	Monodelphis_domestica
ENSAMXG00000042321	PNPT1	99	83.541	ENSMALG00000018484	PNPT1	99	81.285	Monopterus_albus
ENSAMXG00000042321	PNPT1	99	78.255	MGP_CAROLIEiJ_G0016153	Pnpt1	91	78.255	Mus_caroli
ENSAMXG00000042321	PNPT1	99	78.116	ENSMUSG00000020464	Pnpt1	91	78.116	Mus_musculus
ENSAMXG00000042321	PNPT1	99	78.947	MGP_PahariEiJ_G0016737	Pnpt1	93	78.065	Mus_pahari
ENSAMXG00000042321	PNPT1	99	78.255	MGP_SPRETEiJ_G0016996	Pnpt1	95	78.255	Mus_spretus
ENSAMXG00000042321	PNPT1	99	78.453	ENSMPUG00000002353	PNPT1	91	78.237	Mustela_putorius_furo
ENSAMXG00000042321	PNPT1	98	77.901	ENSMLUG00000003886	PNPT1	93	76.934	Myotis_lucifugus
ENSAMXG00000042321	PNPT1	99	77.562	ENSNGAG00000020856	-	92	77.018	Nannospalax_galili
ENSAMXG00000042321	PNPT1	75	81.273	ENSNBRG00000012517	PNPT1	87	81.273	Neolamprologus_brichardi
ENSAMXG00000042321	PNPT1	90	75.641	ENSNLEG00000003327	-	89	75.641	Nomascus_leucogenys
ENSAMXG00000042321	PNPT1	99	76.316	ENSNLEG00000009354	PNPT1	91	76.316	Nomascus_leucogenys
ENSAMXG00000042321	PNPT1	99	76.177	ENSOPRG00000010232	-	91	76.177	Ochotona_princeps
ENSAMXG00000042321	PNPT1	99	79.501	ENSODEG00000012137	PNPT1	91	79.501	Octodon_degus
ENSAMXG00000042321	PNPT1	99	83.978	ENSONIG00000000983	PNPT1	91	83.978	Oreochromis_niloticus
ENSAMXG00000042321	PNPT1	95	79.542	ENSOANG00000011178	PNPT1	98	79.542	Ornithorhynchus_anatinus
ENSAMXG00000042321	PNPT1	99	78.867	ENSOCUG00000006889	PNPT1	91	78.867	Oryctolagus_cuniculus
ENSAMXG00000042321	PNPT1	99	82.900	ENSORLG00000004335	PNPT1	91	82.900	Oryzias_latipes
ENSAMXG00000042321	PNPT1	99	82.627	ENSORLG00015018951	PNPT1	99	82.627	Oryzias_latipes_hsok
ENSAMXG00000042321	PNPT1	99	75.305	ENSOGAG00000009840	PNPT1	92	75.305	Otolemur_garnettii
ENSAMXG00000042321	PNPT1	99	78.008	ENSOARG00000002164	PNPT1	91	77.793	Ovis_aries
ENSAMXG00000042321	PNPT1	86	77.424	ENSPPAG00000024705	PNPT1	88	77.424	Pan_paniscus
ENSAMXG00000042321	PNPT1	99	63.889	ENSPPAG00000040514	-	90	63.889	Pan_paniscus
ENSAMXG00000042321	PNPT1	99	79.501	ENSPPRG00000001366	PNPT1	91	79.282	Panthera_pardus
ENSAMXG00000042321	PNPT1	99	79.640	ENSPTIG00000014915	PNPT1	91	79.420	Panthera_tigris_altaica
ENSAMXG00000042321	PNPT1	99	79.086	ENSPTRG00000011934	PNPT1	91	79.086	Pan_troglodytes
ENSAMXG00000042321	PNPT1	99	63.573	ENSPTRG00000051411	-	91	63.573	Pan_troglodytes
ENSAMXG00000042321	PNPT1	99	79.501	ENSPANG00000022846	PNPT1	92	78.796	Papio_anubis
ENSAMXG00000042321	PNPT1	99	82.944	ENSPKIG00000021612	PNPT1	99	79.642	Paramormyrops_kingsleyae
ENSAMXG00000042321	PNPT1	99	79.722	ENSPSIG00000013120	PNPT1	93	79.722	Pelodiscus_sinensis
ENSAMXG00000042321	PNPT1	99	77.701	ENSPEMG00000004284	Pnpt1	91	77.701	Peromyscus_maniculatus_bairdii
ENSAMXG00000042321	PNPT1	98	72.992	ENSPMAG00000008932	PNPT1	98	72.992	Petromyzon_marinus
ENSAMXG00000042321	PNPT1	99	79.363	ENSPCIG00000010236	PNPT1	92	78.659	Phascolarctos_cinereus
ENSAMXG00000042321	PNPT1	99	83.702	ENSPFOG00000010229	PNPT1	93	83.702	Poecilia_formosa
ENSAMXG00000042321	PNPT1	99	83.840	ENSPLAG00000009008	PNPT1	96	82.019	Poecilia_latipinna
ENSAMXG00000042321	PNPT1	99	83.564	ENSPMEG00000004192	PNPT1	99	83.595	Poecilia_mexicana
ENSAMXG00000042321	PNPT1	99	83.034	ENSPREG00000003072	PNPT1	99	83.034	Poecilia_reticulata
ENSAMXG00000042321	PNPT1	99	79.086	ENSPPYG00000012399	PNPT1	91	79.086	Pongo_abelii
ENSAMXG00000042321	PNPT1	99	69.806	ENSPCAG00000010806	PNPT1	98	69.806	Procavia_capensis
ENSAMXG00000042321	PNPT1	99	69.093	ENSPCOG00000015664	PNPT1	99	69.093	Propithecus_coquereli
ENSAMXG00000042321	PNPT1	78	70.557	ENSPVAG00000005379	PNPT1	82	63.087	Pteropus_vampyrus
ENSAMXG00000042321	PNPT1	99	80.939	ENSPNYG00000000363	PNPT1	95	80.939	Pundamilia_nyererei
ENSAMXG00000042321	PNPT1	99	88.567	ENSPNAG00000010891	PNPT1	94	88.567	Pygocentrus_nattereri
ENSAMXG00000042321	PNPT1	99	78.670	ENSRNOG00000003600	Pnpt1	93	77.793	Rattus_norvegicus
ENSAMXG00000042321	PNPT1	99	79.006	ENSRBIG00000043016	PNPT1	92	79.006	Rhinopithecus_bieti
ENSAMXG00000042321	PNPT1	99	78.729	ENSRROG00000040537	PNPT1	92	78.729	Rhinopithecus_roxellana
ENSAMXG00000042321	PNPT1	96	78.267	ENSSBOG00000032574	PNPT1	98	78.398	Saimiri_boliviensis_boliviensis
ENSAMXG00000042321	PNPT1	68	80.000	ENSSHAG00000014040	PNPT1	98	80.328	Sarcophilus_harrisii
ENSAMXG00000042321	PNPT1	100	73.224	ENSSFOG00015017596	PNPT1	95	73.224	Scleropages_formosus
ENSAMXG00000042321	PNPT1	99	82.173	ENSSMAG00000018471	PNPT1	98	81.145	Scophthalmus_maximus
ENSAMXG00000042321	PNPT1	99	83.172	ENSSDUG00000018584	PNPT1	93	83.172	Seriola_dumerili
ENSAMXG00000042321	PNPT1	99	83.448	ENSSLDG00000023385	PNPT1	99	83.639	Seriola_lalandi_dorsalis
ENSAMXG00000042321	PNPT1	80	77.384	ENSSARG00000012819	PNPT1	75	76.356	Sorex_araneus
ENSAMXG00000042321	PNPT1	99	77.018	ENSSPUG00000011785	PNPT1	93	77.018	Sphenodon_punctatus
ENSAMXG00000042321	PNPT1	99	80.848	ENSSPAG00000016880	PNPT1	99	79.890	Stegastes_partitus
ENSAMXG00000042321	PNPT1	99	78.255	ENSSSCG00000031882	PNPT1	91	78.039	Sus_scrofa
ENSAMXG00000042321	PNPT1	99	77.018	ENSTGUG00000006908	PNPT1	99	77.018	Taeniopygia_guttata
ENSAMXG00000042321	PNPT1	98	82.378	ENSTRUG00000005495	PNPT1	97	79.330	Takifugu_rubripes
ENSAMXG00000042321	PNPT1	98	81.944	ENSTNIG00000007460	PNPT1	96	81.568	Tetraodon_nigroviridis
ENSAMXG00000042321	PNPT1	99	50.414	ENSTBEG00000010788	PNPT1	91	50.414	Tupaia_belangeri
ENSAMXG00000042321	PNPT1	99	77.701	ENSTTRG00000000029	PNPT1	98	77.701	Tursiops_truncatus
ENSAMXG00000042321	PNPT1	91	82.480	ENSUAMG00000017133	PNPT1	98	82.480	Ursus_americanus
ENSAMXG00000042321	PNPT1	99	79.086	ENSUMAG00000018844	PNPT1	90	79.086	Ursus_maritimus
ENSAMXG00000042321	PNPT1	99	71.389	ENSVPAG00000007097	PNPT1	91	71.191	Vicugna_pacos
ENSAMXG00000042321	PNPT1	99	79.363	ENSVVUG00000010034	PNPT1	91	79.363	Vulpes_vulpes
ENSAMXG00000042321	PNPT1	99	79.668	ENSXETG00000006075	pnpt1	91	79.668	Xenopus_tropicalis
ENSAMXG00000042321	PNPT1	99	83.840	ENSXCOG00000013381	PNPT1	97	83.840	Xiphophorus_couchianus
ENSAMXG00000042321	PNPT1	99	83.840	ENSXMAG00000016907	PNPT1	97	83.840	Xiphophorus_maculatus