EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042337 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3767 bases
Position: chrAPWO02000405.1:362086-365852
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032690	RVT_1	PF00078.27	1.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031274	-	3767	-	ENSAMXP00000032690	884 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042337	-	95	41.706	ENSAMXG00000040121	-	99	41.706
ENSAMXG00000042337	-	87	49.413	ENSAMXG00000041150	-	76	49.413
ENSAMXG00000042337	-	98	43.779	ENSAMXG00000042761	-	68	43.779
ENSAMXG00000042337	-	98	37.816	ENSAMXG00000037256	-	69	37.816
ENSAMXG00000042337	-	98	42.184	ENSAMXG00000036080	-	76	42.184
ENSAMXG00000042337	-	98	38.736	ENSAMXG00000036146	-	69	38.736
ENSAMXG00000042337	-	99	36.219	ENSAMXG00000031230	-	69	36.219
ENSAMXG00000042337	-	70	36.480	ENSAMXG00000037218	-	63	36.480
ENSAMXG00000042337	-	52	30.490	ENSAMXG00000035718	-	83	30.490
ENSAMXG00000042337	-	98	35.240	ENSAMXG00000034221	-	69	35.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042337	-	98	40.369	ENSAPEG00000024005	-	69	40.369	Amphiprion_percula
ENSAMXG00000042337	-	65	30.651	ENSACAG00000028658	-	60	30.651	Anolis_carolinensis
ENSAMXG00000042337	-	98	30.575	ENSACAG00000029004	-	69	30.575	Anolis_carolinensis
ENSAMXG00000042337	-	61	32.037	ENSACAG00000029157	-	57	32.037	Anolis_carolinensis
ENSAMXG00000042337	-	80	30.183	ENSACAG00000029072	-	64	30.183	Anolis_carolinensis
ENSAMXG00000042337	-	75	31.250	ENSACAG00000029468	-	64	31.250	Anolis_carolinensis
ENSAMXG00000042337	-	57	32.485	ENSACAG00000028357	-	57	32.485	Anolis_carolinensis
ENSAMXG00000042337	-	61	32.065	ENSACAG00000029084	-	58	32.065	Anolis_carolinensis
ENSAMXG00000042337	-	98	30.743	ENSACAG00000028996	-	70	30.743	Anolis_carolinensis
ENSAMXG00000042337	-	98	41.858	ENSACLG00000010059	-	95	41.858	Astatotilapia_calliptera
ENSAMXG00000042337	-	100	82.692	ENSACLG00000002299	-	69	82.692	Astatotilapia_calliptera
ENSAMXG00000042337	-	98	51.155	ENSACLG00000023207	-	68	51.155	Astatotilapia_calliptera
ENSAMXG00000042337	-	100	82.466	ENSACLG00000007947	-	81	82.466	Astatotilapia_calliptera
ENSAMXG00000042337	-	98	51.155	ENSACLG00000012503	-	68	51.155	Astatotilapia_calliptera
ENSAMXG00000042337	-	98	41.514	ENSACLG00000009410	-	90	41.514	Astatotilapia_calliptera
ENSAMXG00000042337	-	98	39.747	ENSACLG00000019734	-	69	39.747	Astatotilapia_calliptera
ENSAMXG00000042337	-	98	56.221	ENSDARG00000100065	CU467837.1	68	56.221	Danio_rerio
ENSAMXG00000042337	-	87	41.667	ENSDARG00000112132	BX470182.1	65	41.667	Danio_rerio
ENSAMXG00000042337	-	99	33.935	ENSDNOG00000032631	-	78	33.935	Dasypus_novemcinctus
ENSAMXG00000042337	-	50	38.031	ENSEASG00005016488	-	59	38.031	Equus_asinus_asinus
ENSAMXG00000042337	-	99	33.904	ENSEASG00005022910	-	78	33.904	Equus_asinus_asinus
ENSAMXG00000042337	-	99	33.941	ENSEASG00005016911	-	68	33.941	Equus_asinus_asinus
ENSAMXG00000042337	-	88	33.760	ENSEASG00005016304	-	94	33.760	Equus_asinus_asinus
ENSAMXG00000042337	-	50	38.479	ENSEASG00005015079	-	53	38.479	Equus_asinus_asinus
ENSAMXG00000042337	-	92	33.538	ENSEASG00005018086	-	79	33.538	Equus_asinus_asinus
ENSAMXG00000042337	-	82	33.975	ENSEASG00005020069	-	79	33.975	Equus_asinus_asinus
ENSAMXG00000042337	-	65	33.449	ENSECAG00000038498	-	73	33.449	Equus_caballus
ENSAMXG00000042337	-	92	31.288	ENSECAG00000017913	-	98	31.288	Equus_caballus
ENSAMXG00000042337	-	79	31.303	ENSECAG00000012123	-	98	31.303	Equus_caballus
ENSAMXG00000042337	-	72	33.696	ENSFCAG00000044938	-	64	33.696	Felis_catus
ENSAMXG00000042337	-	99	40.961	ENSKMAG00000009901	-	69	40.961	Kryptolebias_marmoratus
ENSAMXG00000042337	-	99	41.008	ENSKMAG00000000374	-	81	41.008	Kryptolebias_marmoratus
ENSAMXG00000042337	-	99	41.123	ENSKMAG00000016041	-	78	41.076	Kryptolebias_marmoratus
ENSAMXG00000042337	-	100	73.190	ENSKMAG00000002570	-	69	73.190	Kryptolebias_marmoratus
ENSAMXG00000042337	-	89	35.472	ENSLACG00000003989	-	94	35.472	Latimeria_chalumnae
ENSAMXG00000042337	-	99	32.584	ENSMFAG00000021078	-	69	32.584	Macaca_fascicularis
ENSAMXG00000042337	-	99	32.655	ENSMFAG00000027683	-	72	32.655	Macaca_fascicularis
ENSAMXG00000042337	-	92	32.641	ENSMFAG00000021158	-	67	32.641	Macaca_fascicularis
ENSAMXG00000042337	-	99	32.219	ENSMFAG00000016983	-	69	32.219	Macaca_fascicularis
ENSAMXG00000042337	-	99	33.258	ENSMMUG00000043159	-	82	33.258	Macaca_mulatta
ENSAMXG00000042337	-	99	32.992	ENSMMUG00000039574	-	80	32.992	Macaca_mulatta
ENSAMXG00000042337	-	57	36.364	ENSMMUG00000030948	-	75	36.364	Macaca_mulatta
ENSAMXG00000042337	-	88	33.248	ENSMMUG00000047485	-	73	33.248	Macaca_mulatta
ENSAMXG00000042337	-	57	40.346	ENSMMUG00000047716	-	88	40.346	Macaca_mulatta
ENSAMXG00000042337	-	98	41.887	ENSORLG00000027879	-	69	41.887	Oryzias_latipes
ENSAMXG00000042337	-	98	40.621	ENSORLG00000027333	-	76	40.621	Oryzias_latipes
ENSAMXG00000042337	-	98	40.138	ENSORLG00000022093	-	83	40.138	Oryzias_latipes
ENSAMXG00000042337	-	98	40.852	ENSORLG00000028541	-	69	40.852	Oryzias_latipes
ENSAMXG00000042337	-	98	41.197	ENSORLG00000025887	-	74	41.197	Oryzias_latipes
ENSAMXG00000042337	-	98	41.887	ENSORLG00000025213	-	69	41.887	Oryzias_latipes
ENSAMXG00000042337	-	98	41.772	ENSORLG00000022453	-	69	41.772	Oryzias_latipes
ENSAMXG00000042337	-	98	41.657	ENSORLG00000022458	-	69	41.657	Oryzias_latipes
ENSAMXG00000042337	-	98	40.852	ENSORLG00000022241	-	70	40.852	Oryzias_latipes
ENSAMXG00000042337	-	98	40.852	ENSORLG00000028129	-	69	40.852	Oryzias_latipes
ENSAMXG00000042337	-	98	41.791	ENSORLG00000025984	-	69	41.791	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000024212	-	69	40.736	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000029348	-	70	40.736	Oryzias_latipes
ENSAMXG00000042337	-	97	41.053	ENSORLG00000023192	-	68	41.053	Oryzias_latipes
ENSAMXG00000042337	-	94	40.719	ENSORLG00000022464	-	99	40.719	Oryzias_latipes
ENSAMXG00000042337	-	98	41.542	ENSORLG00000022242	-	69	41.542	Oryzias_latipes
ENSAMXG00000042337	-	98	41.657	ENSORLG00000026236	-	69	41.657	Oryzias_latipes
ENSAMXG00000042337	-	98	40.852	ENSORLG00000024335	-	69	40.852	Oryzias_latipes
ENSAMXG00000042337	-	98	41.197	ENSORLG00000028439	-	83	41.197	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000028057	-	69	40.736	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000030319	-	69	40.736	Oryzias_latipes
ENSAMXG00000042337	-	98	41.657	ENSORLG00000026409	-	70	41.657	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000029560	-	69	40.736	Oryzias_latipes
ENSAMXG00000042337	-	98	34.368	ENSORLG00000023409	-	94	34.407	Oryzias_latipes
ENSAMXG00000042337	-	98	41.657	ENSORLG00000022848	-	69	41.657	Oryzias_latipes
ENSAMXG00000042337	-	98	41.657	ENSORLG00000025676	-	72	41.657	Oryzias_latipes
ENSAMXG00000042337	-	98	41.542	ENSORLG00000030174	-	67	41.542	Oryzias_latipes
ENSAMXG00000042337	-	98	40.852	ENSORLG00000022606	-	69	40.852	Oryzias_latipes
ENSAMXG00000042337	-	98	40.621	ENSORLG00000029461	-	69	40.621	Oryzias_latipes
ENSAMXG00000042337	-	98	41.542	ENSORLG00000025057	-	69	41.542	Oryzias_latipes
ENSAMXG00000042337	-	98	40.506	ENSORLG00000023904	-	69	40.506	Oryzias_latipes
ENSAMXG00000042337	-	98	41.772	ENSORLG00000025803	-	69	41.772	Oryzias_latipes
ENSAMXG00000042337	-	98	41.312	ENSORLG00000024230	-	69	41.312	Oryzias_latipes
ENSAMXG00000042337	-	98	40.621	ENSORLG00000027430	-	69	40.621	Oryzias_latipes
ENSAMXG00000042337	-	98	40.621	ENSORLG00000028545	-	69	40.621	Oryzias_latipes
ENSAMXG00000042337	-	98	50.978	ENSORLG00000026117	-	68	50.978	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000022925	-	69	40.736	Oryzias_latipes
ENSAMXG00000042337	-	98	41.772	ENSORLG00000025035	-	69	41.772	Oryzias_latipes
ENSAMXG00000042337	-	98	40.621	ENSORLG00000022264	-	69	40.621	Oryzias_latipes
ENSAMXG00000042337	-	98	40.852	ENSORLG00000023842	-	70	40.852	Oryzias_latipes
ENSAMXG00000042337	-	96	40.920	ENSORLG00000029532	-	68	40.920	Oryzias_latipes
ENSAMXG00000042337	-	98	41.427	ENSORLG00000027816	-	82	41.427	Oryzias_latipes
ENSAMXG00000042337	-	99	47.945	ENSORLG00000027601	-	69	47.945	Oryzias_latipes
ENSAMXG00000042337	-	98	40.736	ENSORLG00000026574	-	69	40.736	Oryzias_latipes
ENSAMXG00000042337	-	98	41.657	ENSORLG00000023962	-	69	41.657	Oryzias_latipes
ENSAMXG00000042337	-	98	41.772	ENSORLG00020018889	-	69	41.772	Oryzias_latipes_hni
ENSAMXG00000042337	-	98	42.002	ENSORLG00020005656	-	69	42.002	Oryzias_latipes_hni
ENSAMXG00000042337	-	98	41.427	ENSORLG00020011033	-	69	41.427	Oryzias_latipes_hni
ENSAMXG00000042337	-	98	37.500	ENSORLG00020019330	-	69	37.500	Oryzias_latipes_hni
ENSAMXG00000042337	-	98	41.657	ENSORLG00020002923	-	69	41.657	Oryzias_latipes_hni
ENSAMXG00000042337	-	98	41.772	ENSORLG00020004575	-	69	41.772	Oryzias_latipes_hni
ENSAMXG00000042337	-	98	35.763	ENSORLG00015011318	-	74	35.763	Oryzias_latipes_hsok
ENSAMXG00000042337	-	93	40.705	ENSORLG00015002019	-	91	40.705	Oryzias_latipes_hsok
ENSAMXG00000042337	-	99	55.631	ENSORLG00015003402	-	77	55.631	Oryzias_latipes_hsok
ENSAMXG00000042337	-	79	39.943	ENSORLG00015010651	-	64	39.943	Oryzias_latipes_hsok
ENSAMXG00000042337	-	98	37.241	ENSOMEG00000007552	-	69	37.241	Oryzias_melastigma
ENSAMXG00000042337	-	99	32.537	ENSPTRG00000046661	-	69	32.537	Pan_troglodytes
ENSAMXG00000042337	-	99	32.309	ENSPTRG00000051987	-	70	32.309	Pan_troglodytes
ENSAMXG00000042337	-	99	32.537	ENSPTRG00000048756	-	69	32.537	Pan_troglodytes
ENSAMXG00000042337	-	99	32.196	ENSPTRG00000048435	-	69	32.196	Pan_troglodytes
ENSAMXG00000042337	-	99	32.992	ENSPANG00000035291	-	69	32.992	Papio_anubis
ENSAMXG00000042337	-	99	32.878	ENSPANG00000029594	-	69	32.878	Papio_anubis
ENSAMXG00000042337	-	99	32.992	ENSPANG00000035704	-	69	32.992	Papio_anubis
ENSAMXG00000042337	-	98	34.932	ENSPMEG00000000819	-	85	34.932	Poecilia_mexicana
ENSAMXG00000042337	-	97	35.267	ENSPMEG00000017430	-	83	35.267	Poecilia_mexicana
ENSAMXG00000042337	-	61	48.588	ENSSDUG00000000789	-	92	48.588	Seriola_dumerili
ENSAMXG00000042337	-	66	34.459	ENSSPUG00000015682	-	68	34.459	Sphenodon_punctatus
ENSAMXG00000042337	-	57	39.335	ENSSPUG00000006153	-	64	39.335	Sphenodon_punctatus