EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042419 (Gene tree)
Gene ID: 103035406
Gene Symbol: rab3c
Alias: zgc:92916
Full Name: RAB3C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3414 bases
Position: chrAPWO02001285.1:9037-12450
Accession: 103035406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038999	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057437	-	739	XM_007242566	ENSAMXP00000038999	217 (aa)	XP_007242628	-

Gene Model

Click here to download ENSAMXG00000042419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042419	rab3c	93	46.040	ENSAMXG00000003547	rab1ba	88	46.040
ENSAMXG00000042419	rab3c	95	35.981	ENSAMXG00000009640	rab14	99	35.981
ENSAMXG00000042419	rab3c	72	41.026	ENSAMXG00000024632	rab11al	76	41.026
ENSAMXG00000042419	rab3c	70	35.065	ENSAMXG00000033390	rap1aa	78	35.065
ENSAMXG00000042419	rab3c	81	33.149	ENSAMXG00000036330	RAB38	84	33.149
ENSAMXG00000042419	rab3c	68	40.940	ENSAMXG00000040460	zgc:101559	61	40.940
ENSAMXG00000042419	rab3c	77	46.108	ENSAMXG00000038243	si:dkey-16l2.16	82	56.311
ENSAMXG00000042419	rab3c	91	36.816	ENSAMXG00000033216	rab41	92	36.816
ENSAMXG00000042419	rab3c	67	33.333	ENSAMXG00000029130	-	79	33.333
ENSAMXG00000042419	rab3c	73	33.333	ENSAMXG00000002254	-	78	33.333
ENSAMXG00000042419	rab3c	92	39.130	ENSAMXG00000003155	rab11a	96	39.130
ENSAMXG00000042419	rab3c	71	35.032	ENSAMXG00000037428	-	74	35.032
ENSAMXG00000042419	rab3c	91	38.000	ENSAMXG00000004630	rab6ba	93	38.000
ENSAMXG00000042419	rab3c	78	52.353	ENSAMXG00000004882	rab12	86	45.327
ENSAMXG00000042419	rab3c	82	46.629	ENSAMXG00000033470	RAB15	84	46.629
ENSAMXG00000042419	rab3c	92	38.049	ENSAMXG00000003717	rab39bb	96	38.049
ENSAMXG00000042419	rab3c	73	33.333	ENSAMXG00000032027	rab7a	78	33.333
ENSAMXG00000042419	rab3c	77	30.178	ENSAMXG00000010919	mras	81	30.178
ENSAMXG00000042419	rab3c	93	38.756	ENSAMXG00000032729	rab42a	98	38.756
ENSAMXG00000042419	rab3c	76	37.349	ENSAMXG00000037267	-	92	34.848
ENSAMXG00000042419	rab3c	70	36.364	ENSAMXG00000040286	rab33ba	64	36.364
ENSAMXG00000042419	rab3c	93	47.030	ENSAMXG00000032564	rab1ab	99	47.030
ENSAMXG00000042419	rab3c	73	31.447	ENSAMXG00000033907	hrasb	83	31.447
ENSAMXG00000042419	rab3c	90	37.688	ENSAMXG00000036179	rab5aa	89	37.688
ENSAMXG00000042419	rab3c	73	31.447	ENSAMXG00000035885	hrasa	83	31.447
ENSAMXG00000042419	rab3c	83	43.407	ENSAMXG00000009935	rab30	73	43.407
ENSAMXG00000042419	rab3c	97	36.406	ENSAMXG00000040126	-	79	36.406
ENSAMXG00000042419	rab3c	76	48.193	ENSAMXG00000040604	-	82	48.193
ENSAMXG00000042419	rab3c	81	47.727	ENSAMXG00000043951	rab15	83	47.727
ENSAMXG00000042419	rab3c	73	32.704	ENSAMXG00000017217	kras	84	32.704
ENSAMXG00000042419	rab3c	73	31.902	ENSAMXG00000043003	rab34a	63	31.902
ENSAMXG00000042419	rab3c	71	37.267	ENSAMXG00000032663	si:dkey-13a21.4	74	37.267
ENSAMXG00000042419	rab3c	68	31.646	ENSAMXG00000006018	rab34b	68	31.667
ENSAMXG00000042419	rab3c	74	31.056	ENSAMXG00000014960	rab23	77	32.704
ENSAMXG00000042419	rab3c	88	37.245	ENSAMXG00000035919	rab5ab	88	37.245
ENSAMXG00000042419	rab3c	93	44.059	ENSAMXG00000034850	-	99	44.059
ENSAMXG00000042419	rab3c	75	30.357	ENSAMXG00000040611	rabl2	72	30.357
ENSAMXG00000042419	rab3c	91	36.364	ENSAMXG00000013054	rab22a	97	36.364
ENSAMXG00000042419	rab3c	73	35.366	ENSAMXG00000026476	rab9b	73	35.366
ENSAMXG00000042419	rab3c	92	49.500	ENSAMXG00000030712	rab13	96	49.500
ENSAMXG00000042419	rab3c	74	50.625	ENSAMXG00000039486	zgc:171927	76	50.625
ENSAMXG00000042419	rab3c	68	30.323	ENSAMXG00000034227	rab32b	73	30.323
ENSAMXG00000042419	rab3c	76	48.795	ENSAMXG00000039865	rab35b	82	48.795
ENSAMXG00000042419	rab3c	92	38.500	ENSAMXG00000037623	-	92	38.500
ENSAMXG00000042419	rab3c	73	44.720	ENSAMXG00000041657	rab39ba	76	44.720
ENSAMXG00000042419	rab3c	66	33.333	ENSAMXG00000033069	si:cabz01085950.1	70	33.333
ENSAMXG00000042419	rab3c	91	37.688	ENSAMXG00000032547	rab6a	94	37.688
ENSAMXG00000042419	rab3c	85	38.542	ENSAMXG00000036772	rab2a	99	36.364
ENSAMXG00000042419	rab3c	94	36.765	ENSAMXG00000029712	rab25b	94	36.765
ENSAMXG00000042419	rab3c	73	30.675	ENSAMXG00000026059	RAB9A	81	30.675
ENSAMXG00000042419	rab3c	82	37.288	ENSAMXG00000040879	rab25a	83	37.288
ENSAMXG00000042419	rab3c	90	38.462	ENSAMXG00000042655	rab11bb	89	38.462
ENSAMXG00000042419	rab3c	75	31.325	ENSAMXG00000025889	RAB9A	82	31.325
ENSAMXG00000042419	rab3c	74	46.914	ENSAMXG00000042073	rab18b	79	46.914
ENSAMXG00000042419	rab3c	80	31.285	ENSAMXG00000041488	dnajc27	65	31.285
ENSAMXG00000042419	rab3c	73	33.962	ENSAMXG00000012327	nras	88	33.962
ENSAMXG00000042419	rab3c	73	40.881	ENSAMXG00000039737	RAB19	73	40.881
ENSAMXG00000042419	rab3c	77	30.769	ENSAMXG00000033764	si:ch73-116o1.2	81	30.769
ENSAMXG00000042419	rab3c	74	30.675	ENSAMXG00000010334	rras	79	30.247
ENSAMXG00000042419	rab3c	73	35.185	ENSAMXG00000017266	rab36	61	35.185
ENSAMXG00000042419	rab3c	81	36.571	ENSAMXG00000043717	rab5c	92	35.266
ENSAMXG00000042419	rab3c	73	33.951	ENSAMXG00000031957	zgc:100918	79	33.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042419	rab3c	71	80.892	ENSMLEG00000030130	RAB3C	95	80.892	Mandrillus_leucophaeus
ENSAMXG00000042419	rab3c	100	86.239	ENSPNAG00000003227	rab3c	100	86.239	Pygocentrus_nattereri
ENSAMXG00000042419	rab3c	71	80.892	ENSRROG00000030997	RAB3C	95	80.892	Rhinopithecus_roxellana