EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042451 (Gene tree)
Gene ID: 103032857
Gene Symbol: aggf1
Alias: im:7146636|zgc:152959
Full Name: angiogenic factor with G-patch and FHA domains 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 21761 bases
Position: chr14:12495073-12516833
Accession: 103032857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027796	G-patch	PF01585.23	4.2e-14	1	1
ENSAMXP00000038201	G-patch	PF01585.23	4.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033489	-	5113	-	ENSAMXP00000034098	800 (aa)	-	-
ENSAMXT00000044817	-	5213	-	ENSAMXP00000038201	823 (aa)	-	-
ENSAMXT00000041572	-	5212	XM_007246986	ENSAMXP00000027796	794 (aa)	XP_007247048	UPI000BBDA237

Gene Model

Click here to download ENSAMXG00000042451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042451	aggf1	89	56.421	ENSATEG00000023889	aggf1	77	67.949	Anabas_testudineus
ENSAMXG00000042451	aggf1	83	44.949	ENSAPLG00000001528	-	50	59.317	Anas_platyrhynchos
ENSAMXG00000042451	aggf1	88	45.291	ENSBTAG00000034823	AGGF1	84	60.123	Bos_taurus
ENSAMXG00000042451	aggf1	89	45.103	ENSCHIG00000012662	-	84	60.125	Capra_hircus
ENSAMXG00000042451	aggf1	89	43.810	ENSTSYG00000012743	-	80	60.317	Carlito_syrichta
ENSAMXG00000042451	aggf1	89	44.945	ENSDNOG00000018473	-	82	61.935	Dasypus_novemcinctus
ENSAMXG00000042451	aggf1	70	48.705	ENSEBUG00000005188	aggf1	75	53.548	Eptatretus_burgeri
ENSAMXG00000042451	aggf1	89	46.429	ENSSTOG00000021590	-	81	60.436	Ictidomys_tridecemlineatus
ENSAMXG00000042451	aggf1	75	57.382	ENSJJAG00000012003	Aggf1	79	60.645	Jaculus_jaculus
ENSAMXG00000042451	aggf1	89	44.979	ENSMLUG00000016792	-	80	61.146	Myotis_lucifugus
ENSAMXG00000042451	aggf1	89	42.250	ENSNLEG00000026907	-	79	49.708	Nomascus_leucogenys
ENSAMXG00000042451	aggf1	89	45.994	ENSODEG00000000501	-	82	60.759	Octodon_degus
ENSAMXG00000042451	aggf1	88	44.521	ENSOARG00000016987	-	84	60.312	Ovis_aries
ENSAMXG00000042451	aggf1	68	60.497	ENSPMGG00000007800	aggf1	76	66.346	Periophthalmus_magnuspinnatus
ENSAMXG00000042451	aggf1	90	55.154	ENSPREG00000000844	aggf1	61	72.222	Poecilia_reticulata
ENSAMXG00000042451	aggf1	67	56.090	ENSPCAG00000001207	-	80	56.090	Procavia_capensis
ENSAMXG00000042451	aggf1	69	50.482	ENSPVAG00000009733	-	80	50.482	Pteropus_vampyrus
ENSAMXG00000042451	aggf1	100	71.677	ENSPNAG00000020774	aggf1	100	70.062	Pygocentrus_nattereri
ENSAMXG00000042451	aggf1	78	42.547	ENSSARG00000004985	-	51	54.693	Sorex_araneus
ENSAMXG00000042451	aggf1	89	56.344	ENSSPAG00000013607	aggf1	88	71.141	Stegastes_partitus
ENSAMXG00000042451	aggf1	82	44.477	ENSTGUG00000004021	-	50	58.589	Taeniopygia_guttata
ENSAMXG00000042451	aggf1	89	42.720	ENSVPAG00000001901	-	83	59.202	Vicugna_pacos
ENSAMXG00000042451	aggf1	72	58.457	ENSXETG00000017077	aggf1	91	55.789	Xenopus_tropicalis