EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000042541 (Gene tree)
Gene ID
103040066
Gene Symbol
rpl28
Alias
rpl28l|zgc:66289
Full Name
ribosomal protein L28
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
4923 bases
Position
chr14:26810448-26815370
Accession
103040066
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000043169Ribosomal_L28ePF01778.171.2e-3411
ENSAMXP00000032902Ribosomal_L28ePF01778.171.7e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000054724-414XM_022676415ENSAMXP00000043169137 (aa)XP_022532136W5L5Y4
ENSAMXT00000047370-2140-ENSAMXP00000032902153 (aa)--
Gene Model
Click here to download ENSAMXG00000042541's gene model file
Pathways
Pathway IDPathway NameSource
amex03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042541's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000042541rpl2810073.723ENSG00000108107RPL289979.412Homo_sapiens
ENSAMXG00000042541rpl2810083.942ENSAPOG00000023913rpl2810083.942Acanthochromis_polyacanthus
ENSAMXG00000042541rpl2810073.723ENSAMEG00000003764RPL2810073.723Ailuropoda_melanoleuca
ENSAMXG00000042541rpl2810085.401ENSACIG00000014369rpl2810085.401Amphilophus_citrinellus
ENSAMXG00000042541rpl2810083.212ENSAOCG00000019874rpl289483.212Amphiprion_ocellaris
ENSAMXG00000042541rpl2810083.212ENSAPEG00000020972rpl2810083.212Amphiprion_percula
ENSAMXG00000042541rpl2810083.212ENSATEG00000013839rpl2810083.212Anabas_testudineus
ENSAMXG00000042541rpl2810083.212ENSACAG00000015980-10083.212Anolis_carolinensis
ENSAMXG00000042541rpl2810062.044ENSACAG00000006100-10062.044Anolis_carolinensis
ENSAMXG00000042541rpl2810073.723ENSANAG00000034536RPL289979.412Aotus_nancymaae
ENSAMXG00000042541rpl2810083.212ENSACLG00000027917rpl289883.212Astatotilapia_calliptera
ENSAMXG00000042541rpl289873.881ENSBTAG00000023343RPL287170.748Bos_taurus
ENSAMXG00000042541rpl288839.024WBGene00004442rpl-289139.024Caenorhabditis_elegans
ENSAMXG00000042541rpl2810073.723ENSCJAG00000000869RPL2810073.723Callithrix_jacchus
ENSAMXG00000042541rpl2810074.453ENSCAFG00000002585RPL2810074.453Canis_familiaris
ENSAMXG00000042541rpl2810074.453ENSCAFG00020015496-10074.453Canis_lupus_dingo
ENSAMXG00000042541rpl2810073.723ENSCAFG00020024049-10073.723Canis_lupus_dingo
ENSAMXG00000042541rpl2810073.723ENSCHIG00000025540-10073.723Capra_hircus
ENSAMXG00000042541rpl2810051.825ENSCHIG00000010485-9751.825Capra_hircus
ENSAMXG00000042541rpl2810073.723ENSTSYG00000033853RPL2810073.723Carlito_syrichta
ENSAMXG00000042541rpl288461.739ENSTSYG00000032922-9861.739Carlito_syrichta
ENSAMXG00000042541rpl2810048.905ENSTSYG00000035503-10048.905Carlito_syrichta
ENSAMXG00000042541rpl2810052.555ENSTSYG00000036697-9052.555Carlito_syrichta
ENSAMXG00000042541rpl2810073.723ENSCAPG00000007161-10073.723Cavia_aperea
ENSAMXG00000042541rpl2810074.453ENSCPOG00000012833-10074.453Cavia_porcellus
ENSAMXG00000042541rpl2810072.263ENSCPOG00000023112-10072.263Cavia_porcellus
ENSAMXG00000042541rpl2810056.204ENSCCAG00000003452-10056.204Cebus_capucinus
ENSAMXG00000042541rpl2810073.723ENSCCAG00000025765RPL289979.412Cebus_capucinus
ENSAMXG00000042541rpl2810056.934ENSCCAG00000012793-10056.934Cebus_capucinus
ENSAMXG00000042541rpl2810064.964ENSCCAG00000018730-10064.964Cebus_capucinus
ENSAMXG00000042541rpl289955.882ENSCATG00000039353-9955.882Cercocebus_atys
ENSAMXG00000042541rpl2810073.723ENSCATG00000031417RPL289979.412Cercocebus_atys
ENSAMXG00000042541rpl2810074.453ENSCLAG00000000684RPL2810074.453Chinchilla_lanigera
ENSAMXG00000042541rpl2810074.453ENSCSAG00000001738-10074.453Chlorocebus_sabaeus
ENSAMXG00000042541rpl2810071.533ENSCSAG00000018419-10071.533Chlorocebus_sabaeus
ENSAMXG00000042541rpl288581.034ENSCPBG00000008298RPL287181.034Chrysemys_picta_bellii
ENSAMXG00000042541rpl288955.738ENSCSAVG00000008832-9855.738Ciona_savignyi
ENSAMXG00000042541rpl289952.941ENSCANG00000008828-9952.941Colobus_angolensis_palliatus
ENSAMXG00000042541rpl2810072.993ENSCANG00000038322RPL289979.412Colobus_angolensis_palliatus
ENSAMXG00000042541rpl2810071.533ENSCANG00000002437-10071.533Colobus_angolensis_palliatus
ENSAMXG00000042541rpl2810071.533ENSCANG00000021622-10071.533Colobus_angolensis_palliatus
ENSAMXG00000042541rpl2810074.453ENSCGRG00001023644Rpl2810074.453Cricetulus_griseus_chok1gshd
ENSAMXG00000042541rpl2810060.584ENSCGRG00001019521-10060.584Cricetulus_griseus_chok1gshd
ENSAMXG00000042541rpl288358.772ENSCGRG00000006958-8658.772Cricetulus_griseus_crigri
ENSAMXG00000042541rpl288071.818ENSCGRG00000004471Rpl2810071.818Cricetulus_griseus_crigri
ENSAMXG00000042541rpl2810081.752ENSCSEG00000001312rpl2810081.752Cynoglossus_semilaevis
ENSAMXG00000042541rpl2810082.482ENSCVAG00000022473rpl2810082.482Cyprinodon_variegatus
ENSAMXG00000042541rpl289981.618ENSDARG00000005791rpl289981.618Danio_rerio
ENSAMXG00000042541rpl2810073.723ENSDNOG00000044172-10073.723Dasypus_novemcinctus
ENSAMXG00000042541rpl287956.835ENSDNOG00000046131RPL288656.835Dasypus_novemcinctus
ENSAMXG00000042541rpl2810075.182ENSDORG00000012809Rpl2810075.182Dipodomys_ordii
ENSAMXG00000042541rpl289846.324FBgn0035422RpL289545.985Drosophila_melanogaster
ENSAMXG00000042541rpl288059.633ENSEBUG00000009129rpl288459.633Eptatretus_burgeri
ENSAMXG00000042541rpl2810072.993ENSEASG00005020779RPL2810072.993Equus_asinus_asinus
ENSAMXG00000042541rpl2810079.310ENSECAG00000026938-7171.831Equus_caballus
ENSAMXG00000042541rpl2810082.482ENSELUG00000001730rpl2810082.482Esox_lucius
ENSAMXG00000042541rpl289353.125ENSFCAG00000040593-7453.125Felis_catus
ENSAMXG00000042541rpl2810072.993ENSFCAG00000005639-10072.993Felis_catus
ENSAMXG00000042541rpl2810074.453ENSFDAG00000021448RPL2810074.453Fukomys_damarensis
ENSAMXG00000042541rpl2810082.482ENSFHEG00000007732rpl289275.484Fundulus_heteroclitus
ENSAMXG00000042541rpl2810081.752ENSGMOG00000015325rpl2810081.752Gadus_morhua
ENSAMXG00000042541rpl2810083.212ENSGAFG00000012973rpl2810083.212Gambusia_affinis
ENSAMXG00000042541rpl2810081.022ENSGACG00000016089rpl2810081.022Gasterosteus_aculeatus
ENSAMXG00000042541rpl2810081.022ENSGAGG00000016908RPL2810081.022Gopherus_agassizii
ENSAMXG00000042541rpl2810072.993ENSGGOG00000022653-9979.412Gorilla_gorilla
ENSAMXG00000042541rpl2810056.204ENSGGOG00000027685-7356.204Gorilla_gorilla
ENSAMXG00000042541rpl2810083.212ENSHBUG00000007390rpl289883.212Haplochromis_burtoni
ENSAMXG00000042541rpl2810073.723ENSHGLG00000009865RPL2810073.723Heterocephalus_glaber_female
ENSAMXG00000042541rpl2810073.723ENSHGLG00100005407RPL2810073.723Heterocephalus_glaber_male
ENSAMXG00000042541rpl2810080.292ENSHCOG00000003134rpl2810080.292Hippocampus_comes
ENSAMXG00000042541rpl2810093.431ENSIPUG00000004935rpl2810093.431Ictalurus_punctatus
ENSAMXG00000042541rpl2810073.723ENSSTOG00000008006RPL2810073.723Ictidomys_tridecemlineatus
ENSAMXG00000042541rpl2810074.453ENSJJAG00000019841Rpl2810074.453Jaculus_jaculus
ENSAMXG00000042541rpl2810080.292ENSKMAG00000011412rpl2810080.292Kryptolebias_marmoratus
ENSAMXG00000042541rpl2810082.482ENSLBEG00000027857rpl2810082.482Labrus_bergylta
ENSAMXG00000042541rpl288160.360ENSLACG00000011783RPL2810060.714Latimeria_chalumnae
ENSAMXG00000042541rpl2810083.942ENSLOCG00000003073rpl289383.942Lepisosteus_oculatus
ENSAMXG00000042541rpl2810074.453ENSLAFG00000022257RPL2810074.453Loxodonta_africana
ENSAMXG00000042541rpl2810073.723ENSMFAG00000043131RPL289979.412Macaca_fascicularis
ENSAMXG00000042541rpl2810073.723ENSMMUG00000015901RPL289979.412Macaca_mulatta
ENSAMXG00000042541rpl2810073.723ENSMNEG00000032714RPL289979.412Macaca_nemestrina
ENSAMXG00000042541rpl2810073.723ENSMLEG00000039619RPL289979.412Mandrillus_leucophaeus
ENSAMXG00000042541rpl2810084.672ENSMAMG00000017519rpl2810084.672Mastacembelus_armatus
ENSAMXG00000042541rpl2810083.212ENSMZEG00005002151rpl289883.212Maylandia_zebra
ENSAMXG00000042541rpl2810056.204ENSMAUG00000017070-10056.204Mesocricetus_auratus
ENSAMXG00000042541rpl289751.880ENSMAUG00000016592-8051.880Mesocricetus_auratus
ENSAMXG00000042541rpl2810074.453ENSMAUG00000000783-10074.453Mesocricetus_auratus
ENSAMXG00000042541rpl2810074.453ENSMAUG00000021147-10074.453Mesocricetus_auratus
ENSAMXG00000042541rpl2810065.693ENSMAUG00000004738-10065.693Mesocricetus_auratus
ENSAMXG00000042541rpl2810073.723ENSMICG00000000996RPL2810073.723Microcebus_murinus
ENSAMXG00000042541rpl2810058.394ENSMICG00000033709-10058.394Microcebus_murinus
ENSAMXG00000042541rpl2810071.739ENSMOCG00000006881-10071.739Microtus_ochrogaster
ENSAMXG00000042541rpl2810074.453ENSMOCG00000006245-10074.453Microtus_ochrogaster
ENSAMXG00000042541rpl2810071.533ENSMOCG00000008075-10071.533Microtus_ochrogaster
ENSAMXG00000042541rpl2810082.482ENSMMOG00000004489rpl2810082.482Mola_mola
ENSAMXG00000042541rpl289980.882ENSMODG00000000275RPL289980.882Monodelphis_domestica
ENSAMXG00000042541rpl2810086.861ENSMALG00000004571rpl2810086.861Monopterus_albus
ENSAMXG00000042541rpl2810074.453MGP_CAROLIEiJ_G0029130Rpl2810074.453Mus_caroli
ENSAMXG00000042541rpl2810074.453ENSMUSG00000030432Rpl2810074.453Mus_musculus
ENSAMXG00000042541rpl2810074.453MGP_PahariEiJ_G0020999Rpl2810074.453Mus_pahari
ENSAMXG00000042541rpl2810074.453MGP_SPRETEiJ_G0030183Rpl2810074.453Mus_spretus
ENSAMXG00000042541rpl2810073.723ENSMPUG00000007450RPL2810073.723Mustela_putorius_furo
ENSAMXG00000042541rpl2810072.993ENSMLUG00000023789-10072.993Myotis_lucifugus
ENSAMXG00000042541rpl2810072.263ENSMLUG00000023198-10072.263Myotis_lucifugus
ENSAMXG00000042541rpl2810074.453ENSNGAG00000016459Rpl289271.523Nannospalax_galili
ENSAMXG00000042541rpl289453.488ENSNGAG00000001032-10053.488Nannospalax_galili
ENSAMXG00000042541rpl2810083.212ENSNBRG00000006729rpl288980.272Neolamprologus_brichardi
ENSAMXG00000042541rpl2810073.723ENSNLEG00000010503-9979.412Nomascus_leucogenys
ENSAMXG00000042541rpl2810051.825ENSNLEG00000029689-10051.825Nomascus_leucogenys
ENSAMXG00000042541rpl285070.588ENSOPRG00000013428-10070.588Ochotona_princeps
ENSAMXG00000042541rpl2810074.453ENSOPRG00000000463-10074.453Ochotona_princeps
ENSAMXG00000042541rpl2810073.723ENSODEG00000019864-10073.723Octodon_degus
ENSAMXG00000042541rpl2810074.453ENSODEG00000010391-10074.453Octodon_degus
ENSAMXG00000042541rpl2810074.453ENSODEG00000020377-10074.453Octodon_degus
ENSAMXG00000042541rpl2810071.533ENSODEG00000019117-10071.533Octodon_degus
ENSAMXG00000042541rpl2810083.212ENSONIG00000007486rpl2810083.212Oreochromis_niloticus
ENSAMXG00000042541rpl2810072.993ENSOCUG00000027112-10072.993Oryctolagus_cuniculus
ENSAMXG00000042541rpl2810066.667ENSOCUG00000027875-10066.667Oryctolagus_cuniculus
ENSAMXG00000042541rpl2810084.672ENSORLG00000005108rpl2810084.672Oryzias_latipes
ENSAMXG00000042541rpl2810084.672ENSORLG00020007182rpl2810084.672Oryzias_latipes_hni
ENSAMXG00000042541rpl2810084.672ENSORLG00015013944rpl2810084.672Oryzias_latipes_hsok
ENSAMXG00000042541rpl2810084.672ENSOMEG00000009716rpl2810084.672Oryzias_melastigma
ENSAMXG00000042541rpl2810073.723ENSOGAG00000025533RPL2810073.723Otolemur_garnettii
ENSAMXG00000042541rpl2810073.723ENSOARG00000001428RPL2810073.723Ovis_aries
ENSAMXG00000042541rpl2810051.825ENSPPAG00000032901-10051.825Pan_paniscus
ENSAMXG00000042541rpl2810054.745ENSPPAG00000034138-10054.745Pan_paniscus
ENSAMXG00000042541rpl2810073.723ENSPPAG00000038000-9979.412Pan_paniscus
ENSAMXG00000042541rpl2810072.993ENSPPRG00000012962-10072.993Panthera_pardus
ENSAMXG00000042541rpl289950.360ENSPPRG00000013998-8153.030Panthera_pardus
ENSAMXG00000042541rpl2810051.095ENSPPRG00000012498-10051.095Panthera_pardus
ENSAMXG00000042541rpl2810072.993ENSPTIG00000011191-10072.993Panthera_tigris_altaica
ENSAMXG00000042541rpl2810073.723ENSPTRG00000011505RPL2810073.723Pan_troglodytes
ENSAMXG00000042541rpl2810054.745ENSPTRG00000043676-10054.745Pan_troglodytes
ENSAMXG00000042541rpl2810054.745ENSPTRG00000043492-10054.745Pan_troglodytes
ENSAMXG00000042541rpl2810073.723ENSPANG00000029716RPL289979.412Papio_anubis
ENSAMXG00000042541rpl289986.029ENSPKIG00000014698rpl289986.029Paramormyrops_kingsleyae
ENSAMXG00000042541rpl288578.632ENSPSIG00000015206RPL288878.632Pelodiscus_sinensis
ENSAMXG00000042541rpl2810081.752ENSPMGG00000004586rpl2810081.752Periophthalmus_magnuspinnatus
ENSAMXG00000042541rpl2810074.453ENSPEMG00000011755Rpl2810074.453Peromyscus_maniculatus_bairdii
ENSAMXG00000042541rpl2810067.153ENSPEMG00000013352-10067.153Peromyscus_maniculatus_bairdii
ENSAMXG00000042541rpl2810067.143ENSPMAG00000008617rpl2810067.143Petromyzon_marinus
ENSAMXG00000042541rpl286359.302ENSPCIG00000019415-8659.302Phascolarctos_cinereus
ENSAMXG00000042541rpl289271.429ENSPCIG00000018601-9571.429Phascolarctos_cinereus
ENSAMXG00000042541rpl2810082.482ENSPFOG00000002206rpl2810082.482Poecilia_formosa
ENSAMXG00000042541rpl2810082.482ENSPLAG00000003206rpl2810082.482Poecilia_latipinna
ENSAMXG00000042541rpl2810082.482ENSPMEG00000000595rpl2810082.482Poecilia_mexicana
ENSAMXG00000042541rpl2810082.482ENSPREG00000002015rpl2810082.482Poecilia_reticulata
ENSAMXG00000042541rpl2810072.993ENSPPYG00000010417-10072.993Pongo_abelii
ENSAMXG00000042541rpl287460.784ENSPPYG00000029517-7660.784Pongo_abelii
ENSAMXG00000042541rpl285067.647ENSPCAG00000012768-10067.647Procavia_capensis
ENSAMXG00000042541rpl2810067.153ENSPCOG00000025957-10067.153Propithecus_coquereli
ENSAMXG00000042541rpl2810073.723ENSPCOG00000017000RPL289979.412Propithecus_coquereli
ENSAMXG00000042541rpl2810071.533ENSPCOG00000007456-10071.533Propithecus_coquereli
ENSAMXG00000042541rpl289267.460ENSPCOG00000014236-8971.186Propithecus_coquereli
ENSAMXG00000042541rpl2810072.263ENSPVAG00000007315RPL2810072.263Pteropus_vampyrus
ENSAMXG00000042541rpl2810082.482ENSPNYG00000004757rpl2810082.482Pundamilia_nyererei
ENSAMXG00000042541rpl2810092.701ENSPNAG00000003547rpl289592.254Pygocentrus_nattereri
ENSAMXG00000042541rpl2810074.453ENSRNOG00000017127Rpl2810074.453Rattus_norvegicus
ENSAMXG00000042541rpl2810070.073ENSRNOG00000061441AABR07071935.110070.073Rattus_norvegicus
ENSAMXG00000042541rpl289666.187ENSRNOG00000009240AABR07016623.19766.187Rattus_norvegicus
ENSAMXG00000042541rpl2810072.993ENSRNOG00000037673AABR07071891.210072.993Rattus_norvegicus
ENSAMXG00000042541rpl2810073.723ENSRBIG00000034637RPL289979.412Rhinopithecus_bieti
ENSAMXG00000042541rpl2810072.263ENSRBIG00000003677-10072.263Rhinopithecus_bieti
ENSAMXG00000042541rpl2810073.723ENSRROG00000028904RPL289979.412Rhinopithecus_roxellana
ENSAMXG00000042541rpl2810048.175ENSRROG00000030502-10048.175Rhinopithecus_roxellana
ENSAMXG00000042541rpl2810048.175ENSSBOG00000034324-10048.175Saimiri_boliviensis_boliviensis
ENSAMXG00000042541rpl2810073.723ENSSBOG00000028286RPL289979.412Saimiri_boliviensis_boliviensis
ENSAMXG00000042541rpl2810084.672ENSSFOG00015001292rpl2810084.672Scleropages_formosus
ENSAMXG00000042541rpl2810085.401ENSSFOG00015012801-10085.401Scleropages_formosus
ENSAMXG00000042541rpl2810082.482ENSSMAG00000008756rpl2810082.482Scophthalmus_maximus
ENSAMXG00000042541rpl2810083.942ENSSDUG00000015127rpl2810083.942Seriola_dumerili
ENSAMXG00000042541rpl285084.058ENSSLDG00000006440-7384.058Seriola_lalandi_dorsalis
ENSAMXG00000042541rpl287936.364ENSSLDG00000009395-8536.364Seriola_lalandi_dorsalis
ENSAMXG00000042541rpl2810083.212ENSSLDG00000000414rpl2810083.212Seriola_lalandi_dorsalis
ENSAMXG00000042541rpl2810064.234ENSSARG00000009741RPL2810064.234Sorex_araneus
ENSAMXG00000042541rpl289980.147ENSSPUG00000010390RPL289980.147Sphenodon_punctatus
ENSAMXG00000042541rpl2810083.212ENSSPAG00000015122rpl287283.212Stegastes_partitus
ENSAMXG00000042541rpl288753.782ENSSSCG00000030430-8753.782Sus_scrofa
ENSAMXG00000042541rpl2810052.482ENSSSCG00000040515-7952.482Sus_scrofa
ENSAMXG00000042541rpl289651.908ENSSSCG00000039543-8851.908Sus_scrofa
ENSAMXG00000042541rpl286566.292ENSSSCG00000038865-6571.831Sus_scrofa
ENSAMXG00000042541rpl2810073.723ENSSSCG00000039460-10073.723Sus_scrofa
ENSAMXG00000042541rpl2810082.482ENSTRUG00000025383rpl2810082.482Takifugu_rubripes
ENSAMXG00000042541rpl2810083.212ENSTNIG00000002577rpl2810083.212Tetraodon_nigroviridis
ENSAMXG00000042541rpl2810073.723ENSTTRG00000002428RPL2810073.723Tursiops_truncatus
ENSAMXG00000042541rpl289847.015ENSUAMG00000023977-8147.015Ursus_americanus
ENSAMXG00000042541rpl288854.167ENSUAMG00000003339-9454.167Ursus_americanus
ENSAMXG00000042541rpl2810073.723ENSUAMG00000017635RPL2810073.723Ursus_americanus
ENSAMXG00000042541rpl288553.448ENSUAMG00000002452-8953.448Ursus_americanus
ENSAMXG00000042541rpl288854.167ENSUMAG00000006441-7554.167Ursus_maritimus
ENSAMXG00000042541rpl288070.909ENSUMAG00000024630-8770.909Ursus_maritimus
ENSAMXG00000042541rpl285067.647ENSVPAG00000004586-10067.647Vicugna_pacos
ENSAMXG00000042541rpl2810078.832ENSXETG00000000132rpl289978.832Xenopus_tropicalis
ENSAMXG00000042541rpl2810083.942ENSXCOG00000001554rpl2810083.942Xiphophorus_couchianus
ENSAMXG00000042541rpl2810084.672ENSXMAG00000005190rpl2810084.672Xiphophorus_maculatus

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