EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042562 (Gene tree)
Gene ID: -
Gene Symbol: urm1
Alias: si:dkeyp-68f6.2
Full Name: ubiquitin related modifier 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5473 bases
Position: chr20:5542461-5547933
Accession: ZDB-GENE-091204-300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040003	Urm1	PF09138.11	3.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047443	-	291	-	ENSAMXP00000040003	96 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042562	urm1	89	67.778	ENSG00000167118	URM1	89	67.778	Homo_sapiens
ENSAMXG00000042562	urm1	89	75.556	ENSAPOG00000009382	urm1	89	75.556	Acanthochromis_polyacanthus
ENSAMXG00000042562	urm1	89	65.556	ENSAMEG00000015446	URM1	89	65.556	Ailuropoda_melanoleuca
ENSAMXG00000042562	urm1	90	74.444	ENSAPEG00000007448	urm1	89	74.444	Amphiprion_percula
ENSAMXG00000042562	urm1	89	73.333	ENSATEG00000019659	urm1	89	73.333	Anabas_testudineus
ENSAMXG00000042562	urm1	88	66.292	ENSAPLG00000008603	URM1	98	66.292	Anas_platyrhynchos
ENSAMXG00000042562	urm1	89	68.889	ENSACAG00000010428	-	89	68.889	Anolis_carolinensis
ENSAMXG00000042562	urm1	89	66.667	ENSANAG00000036717	URM1	89	66.667	Aotus_nancymaae
ENSAMXG00000042562	urm1	89	73.626	ENSACLG00000022484	urm1	89	73.626	Astatotilapia_calliptera
ENSAMXG00000042562	urm1	89	65.556	ENSBTAG00000025612	URM1	89	65.556	Bos_taurus
ENSAMXG00000042562	urm1	67	33.824	WBGene00185048	urm-1	68	33.824	Caenorhabditis_elegans
ENSAMXG00000042562	urm1	89	66.667	ENSCJAG00000020036	URM1	89	66.667	Callithrix_jacchus
ENSAMXG00000042562	urm1	89	64.444	ENSCAFG00000023618	URM1	89	64.444	Canis_familiaris
ENSAMXG00000042562	urm1	68	80.000	ENSCHIG00000012547	-	67	80.000	Capra_hircus
ENSAMXG00000042562	urm1	88	64.045	ENSTSYG00000028376	URM1	88	64.045	Carlito_syrichta
ENSAMXG00000042562	urm1	68	81.538	ENSCAPG00000002189	-	100	81.538	Cavia_aperea
ENSAMXG00000042562	urm1	89	66.667	ENSCPOG00000039069	URM1	89	66.667	Cavia_porcellus
ENSAMXG00000042562	urm1	89	66.667	ENSCCAG00000032510	URM1	89	66.667	Cebus_capucinus
ENSAMXG00000042562	urm1	89	66.667	ENSCATG00000033068	URM1	89	66.667	Cercocebus_atys
ENSAMXG00000042562	urm1	89	66.667	ENSCLAG00000001791	URM1	89	66.667	Chinchilla_lanigera
ENSAMXG00000042562	urm1	98	64.000	ENSCPBG00000025196	URM1	100	64.000	Chrysemys_picta_bellii
ENSAMXG00000042562	urm1	89	66.667	ENSCANG00000012760	URM1	89	66.667	Colobus_angolensis_palliatus
ENSAMXG00000042562	urm1	89	64.444	ENSCGRG00001023888	Urm1	89	64.444	Cricetulus_griseus_chok1gshd
ENSAMXG00000042562	urm1	89	64.444	ENSCGRG00000005358	Urm1	89	64.444	Cricetulus_griseus_crigri
ENSAMXG00000042562	urm1	89	68.889	ENSCSEG00000016193	urm1	89	68.889	Cynoglossus_semilaevis
ENSAMXG00000042562	urm1	68	89.231	ENSCVAG00000011864	urm1	59	89.231	Cyprinodon_variegatus
ENSAMXG00000042562	urm1	89	73.333	ENSDARG00000091198	urm1	89	73.333	Danio_rerio
ENSAMXG00000042562	urm1	89	65.934	ENSDORG00000028424	Urm1	89	65.934	Dipodomys_ordii
ENSAMXG00000042562	urm1	73	70.000	FBgn0053276	Urm1	69	70.000	Drosophila_melanogaster
ENSAMXG00000042562	urm1	89	63.333	ENSETEG00000000039	-	91	63.333	Echinops_telfairi
ENSAMXG00000042562	urm1	95	58.095	ENSEASG00005016204	-	97	58.095	Equus_asinus_asinus
ENSAMXG00000042562	urm1	89	63.333	ENSEEUG00000012945	URM1	89	63.333	Erinaceus_europaeus
ENSAMXG00000042562	urm1	89	75.824	ENSELUG00000006757	URM1	89	75.824	Esox_lucius
ENSAMXG00000042562	urm1	89	65.556	ENSFCAG00000005842	URM1	89	65.556	Felis_catus
ENSAMXG00000042562	urm1	88	65.556	ENSFALG00000001360	URM1	98	65.556	Ficedula_albicollis
ENSAMXG00000042562	urm1	89	65.556	ENSFDAG00000013113	URM1	89	65.556	Fukomys_damarensis
ENSAMXG00000042562	urm1	89	72.222	ENSGMOG00000006245	urm1	89	72.222	Gadus_morhua
ENSAMXG00000042562	urm1	89	66.667	ENSGALG00000004971	URM1	89	66.667	Gallus_gallus
ENSAMXG00000042562	urm1	89	75.556	ENSGAFG00000007518	urm1	89	75.556	Gambusia_affinis
ENSAMXG00000042562	urm1	89	71.429	ENSGACG00000017389	urm1	89	71.429	Gasterosteus_aculeatus
ENSAMXG00000042562	urm1	89	70.330	ENSGAGG00000022865	URM1	89	70.330	Gopherus_agassizii
ENSAMXG00000042562	urm1	89	67.778	ENSGGOG00000014806	URM1	89	67.778	Gorilla_gorilla
ENSAMXG00000042562	urm1	89	72.527	ENSHBUG00000001440	urm1	89	72.527	Haplochromis_burtoni
ENSAMXG00000042562	urm1	89	65.556	ENSHGLG00000016662	URM1	89	65.556	Heterocephalus_glaber_female
ENSAMXG00000042562	urm1	89	65.556	ENSHGLG00100019392	URM1	89	65.556	Heterocephalus_glaber_male
ENSAMXG00000042562	urm1	89	70.330	ENSHCOG00000002828	urm1	89	70.330	Hippocampus_comes
ENSAMXG00000042562	urm1	89	66.667	ENSSTOG00000025351	URM1	89	66.667	Ictidomys_tridecemlineatus
ENSAMXG00000042562	urm1	89	64.444	ENSJJAG00000014799	-	89	64.444	Jaculus_jaculus
ENSAMXG00000042562	urm1	89	59.551	ENSJJAG00000011074	-	89	59.551	Jaculus_jaculus
ENSAMXG00000042562	urm1	91	72.527	ENSKMAG00000011433	urm1	90	72.527	Kryptolebias_marmoratus
ENSAMXG00000042562	urm1	76	62.821	ENSLBEG00000004555	urm1	67	62.821	Labrus_bergylta
ENSAMXG00000042562	urm1	89	64.444	ENSLACG00000016968	URM1	89	64.444	Latimeria_chalumnae
ENSAMXG00000042562	urm1	89	70.330	ENSLOCG00000002768	urm1	89	70.330	Lepisosteus_oculatus
ENSAMXG00000042562	urm1	89	64.130	ENSLAFG00000002178	URM1	89	64.130	Loxodonta_africana
ENSAMXG00000042562	urm1	89	66.667	ENSMFAG00000035214	URM1	89	66.667	Macaca_fascicularis
ENSAMXG00000042562	urm1	72	79.710	ENSMMUG00000018612	URM1	70	79.710	Macaca_mulatta
ENSAMXG00000042562	urm1	89	66.667	ENSMLEG00000028542	URM1	89	66.667	Mandrillus_leucophaeus
ENSAMXG00000042562	urm1	90	74.444	ENSMAMG00000008703	urm1	89	74.444	Mastacembelus_armatus
ENSAMXG00000042562	urm1	89	73.626	ENSMZEG00005017191	urm1	89	73.626	Maylandia_zebra
ENSAMXG00000042562	urm1	88	66.292	ENSMGAG00000003812	URM1	98	66.292	Meleagris_gallopavo
ENSAMXG00000042562	urm1	89	64.444	ENSMAUG00000000479	Urm1	89	64.444	Mesocricetus_auratus
ENSAMXG00000042562	urm1	89	65.556	ENSMICG00000042967	URM1	89	65.556	Microcebus_murinus
ENSAMXG00000042562	urm1	89	64.444	ENSMOCG00000007365	Urm1	89	64.444	Microtus_ochrogaster
ENSAMXG00000042562	urm1	89	72.222	ENSMMOG00000021296	urm1	89	72.222	Mola_mola
ENSAMXG00000042562	urm1	89	67.033	ENSMODG00000023353	URM1	89	67.033	Monodelphis_domestica
ENSAMXG00000042562	urm1	91	70.330	ENSMALG00000018227	urm1	90	70.330	Monopterus_albus
ENSAMXG00000042562	urm1	89	65.556	MGP_CAROLIEiJ_G0023372	Urm1	89	65.556	Mus_caroli
ENSAMXG00000042562	urm1	89	65.556	ENSMUSG00000069020	Urm1	89	65.556	Mus_musculus
ENSAMXG00000042562	urm1	89	65.556	MGP_PahariEiJ_G0024829	Urm1	89	65.556	Mus_pahari
ENSAMXG00000042562	urm1	89	65.556	MGP_SPRETEiJ_G0024289	Urm1	89	65.556	Mus_spretus
ENSAMXG00000042562	urm1	89	64.444	ENSMPUG00000013184	URM1	89	64.444	Mustela_putorius_furo
ENSAMXG00000042562	urm1	66	60.294	ENSMLUG00000007275	URM1	86	60.294	Myotis_lucifugus
ENSAMXG00000042562	urm1	89	66.667	ENSNGAG00000007112	Urm1	89	66.667	Nannospalax_galili
ENSAMXG00000042562	urm1	89	72.527	ENSNBRG00000009012	urm1	89	72.527	Neolamprologus_brichardi
ENSAMXG00000042562	urm1	89	67.778	ENSNLEG00000031211	URM1	89	67.778	Nomascus_leucogenys
ENSAMXG00000042562	urm1	89	67.778	ENSMEUG00000014147	-	89	67.778	Notamacropus_eugenii
ENSAMXG00000042562	urm1	89	66.667	ENSOPRG00000002058	URM1	89	66.667	Ochotona_princeps
ENSAMXG00000042562	urm1	89	65.556	ENSODEG00000017296	URM1	92	65.556	Octodon_degus
ENSAMXG00000042562	urm1	89	73.626	ENSONIG00000003910	urm1	89	73.626	Oreochromis_niloticus
ENSAMXG00000042562	urm1	88	65.556	ENSOANG00000003949	-	92	65.556	Ornithorhynchus_anatinus
ENSAMXG00000042562	urm1	89	65.556	ENSOCUG00000008848	URM1	92	65.556	Oryctolagus_cuniculus
ENSAMXG00000042562	urm1	89	74.444	ENSORLG00000024432	urm1	89	74.444	Oryzias_latipes
ENSAMXG00000042562	urm1	89	74.444	ENSORLG00020000333	urm1	89	74.444	Oryzias_latipes_hni
ENSAMXG00000042562	urm1	80	70.732	ENSORLG00015001370	urm1	60	70.732	Oryzias_latipes_hsok
ENSAMXG00000042562	urm1	89	74.444	ENSOMEG00000023257	urm1	89	74.444	Oryzias_melastigma
ENSAMXG00000042562	urm1	89	65.556	ENSOGAG00000001445	URM1	89	65.556	Otolemur_garnettii
ENSAMXG00000042562	urm1	89	65.556	ENSOARG00000010218	URM1	89	65.556	Ovis_aries
ENSAMXG00000042562	urm1	89	67.778	ENSPPAG00000030946	URM1	89	67.778	Pan_paniscus
ENSAMXG00000042562	urm1	89	64.444	ENSPPRG00000008861	URM1	89	64.444	Panthera_pardus
ENSAMXG00000042562	urm1	89	63.333	ENSPTIG00000012500	URM1	89	63.333	Panthera_tigris_altaica
ENSAMXG00000042562	urm1	89	67.778	ENSPTRG00000021427	URM1	89	67.778	Pan_troglodytes
ENSAMXG00000042562	urm1	89	66.667	ENSPANG00000025883	URM1	89	66.667	Papio_anubis
ENSAMXG00000042562	urm1	89	73.333	ENSPKIG00000021455	urm1	89	73.333	Paramormyrops_kingsleyae
ENSAMXG00000042562	urm1	89	69.231	ENSPSIG00000014442	URM1	89	69.231	Pelodiscus_sinensis
ENSAMXG00000042562	urm1	66	66.667	ENSPMGG00000023974	urm1	58	66.667	Periophthalmus_magnuspinnatus
ENSAMXG00000042562	urm1	89	65.556	ENSPMAG00000007668	urm1	89	65.556	Petromyzon_marinus
ENSAMXG00000042562	urm1	72	78.261	ENSPCIG00000026786	-	66	78.261	Phascolarctos_cinereus
ENSAMXG00000042562	urm1	89	75.556	ENSPFOG00000019694	urm1	89	75.556	Poecilia_formosa
ENSAMXG00000042562	urm1	89	75.556	ENSPLAG00000021729	urm1	89	75.556	Poecilia_latipinna
ENSAMXG00000042562	urm1	89	75.556	ENSPMEG00000009764	urm1	89	75.556	Poecilia_mexicana
ENSAMXG00000042562	urm1	89	75.556	ENSPREG00000008611	urm1	89	75.556	Poecilia_reticulata
ENSAMXG00000042562	urm1	89	67.778	ENSPPYG00000019649	-	89	67.778	Pongo_abelii
ENSAMXG00000042562	urm1	66	58.824	ENSPCAG00000015239	URM1	86	58.824	Procavia_capensis
ENSAMXG00000042562	urm1	89	65.556	ENSPCOG00000021449	URM1	89	65.556	Propithecus_coquereli
ENSAMXG00000042562	urm1	89	65.169	ENSPVAG00000001227	URM1	89	65.169	Pteropus_vampyrus
ENSAMXG00000042562	urm1	89	73.626	ENSPNYG00000012446	urm1	89	73.626	Pundamilia_nyererei
ENSAMXG00000042562	urm1	89	75.824	ENSPNAG00000017145	urm1	93	75.556	Pygocentrus_nattereri
ENSAMXG00000042562	urm1	89	65.556	ENSRNOG00000026636	Urm1	89	65.556	Rattus_norvegicus
ENSAMXG00000042562	urm1	89	66.667	ENSRBIG00000041054	URM1	89	66.667	Rhinopithecus_bieti
ENSAMXG00000042562	urm1	89	66.667	ENSRROG00000038638	URM1	89	66.667	Rhinopithecus_roxellana
ENSAMXG00000042562	urm1	89	66.667	ENSSBOG00000030293	URM1	89	66.667	Saimiri_boliviensis_boliviensis
ENSAMXG00000042562	urm1	89	78.022	ENSSFOG00015000673	urm1	50	78.022	Scleropages_formosus
ENSAMXG00000042562	urm1	89	71.429	ENSSMAG00000019927	urm1	89	71.429	Scophthalmus_maximus
ENSAMXG00000042562	urm1	89	75.556	ENSSDUG00000000566	urm1	89	75.556	Seriola_dumerili
ENSAMXG00000042562	urm1	89	75.556	ENSSLDG00000012250	urm1	89	75.556	Seriola_lalandi_dorsalis
ENSAMXG00000042562	urm1	89	67.033	ENSSPUG00000015548	URM1	89	67.033	Sphenodon_punctatus
ENSAMXG00000042562	urm1	89	76.667	ENSSPAG00000001097	urm1	89	76.667	Stegastes_partitus
ENSAMXG00000042562	urm1	89	65.934	ENSSSCG00000005649	URM1	89	65.934	Sus_scrofa
ENSAMXG00000042562	urm1	88	65.556	ENSTGUG00000003654	URM1	98	65.556	Taeniopygia_guttata
ENSAMXG00000042562	urm1	89	71.429	ENSTRUG00000008530	urm1	89	71.429	Takifugu_rubripes
ENSAMXG00000042562	urm1	89	72.527	ENSTNIG00000013204	urm1	89	72.527	Tetraodon_nigroviridis
ENSAMXG00000042562	urm1	89	62.921	ENSTTRG00000016490	URM1	89	62.921	Tursiops_truncatus
ENSAMXG00000042562	urm1	89	67.033	ENSUAMG00000020279	URM1	89	67.033	Ursus_americanus
ENSAMXG00000042562	urm1	66	60.870	ENSUMAG00000022029	-	67	60.870	Ursus_maritimus
ENSAMXG00000042562	urm1	68	90.769	ENSXCOG00000004982	urm1	80	90.769	Xiphophorus_couchianus
ENSAMXG00000042562	urm1	89	75.556	ENSXMAG00000001680	urm1	89	75.556	Xiphophorus_maculatus