EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042593 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1023 bases
Position: chrAPWO02000119.1:657736-658758
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	1	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	2	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	3	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	4	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	5	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	6	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	7	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	8	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	9	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	10	11
ENSAMXP00000004481	zf-C2H2	PF00096.26	2.9e-66	11	11
ENSAMXP00000004481	zf-met	PF12874.7	7.3e-11	1	3
ENSAMXP00000004481	zf-met	PF12874.7	7.3e-11	2	3
ENSAMXP00000004481	zf-met	PF12874.7	7.3e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000004481	-	1023	-	ENSAMXP00000004481	340 (aa)	-	W5KA70

Gene Model

Click here to download ENSAMXG00000042593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042593	-	90	66.055	ENSAMXG00000030742	-	99	66.055
ENSAMXG00000042593	-	99	62.451	ENSAMXG00000042938	-	87	62.451
ENSAMXG00000042593	-	90	40.476	ENSAMXG00000006669	GFI1	54	40.476
ENSAMXG00000042593	-	99	60.140	ENSAMXG00000031844	-	98	60.140
ENSAMXG00000042593	-	94	62.348	ENSAMXG00000037981	-	74	62.348
ENSAMXG00000042593	-	100	66.118	ENSAMXG00000034847	-	90	66.118
ENSAMXG00000042593	-	92	37.121	ENSAMXG00000016921	znf341	63	31.401
ENSAMXG00000042593	-	93	33.562	ENSAMXG00000039849	snai1b	61	33.562
ENSAMXG00000042593	-	92	60.204	ENSAMXG00000042746	-	84	60.984
ENSAMXG00000042593	-	98	62.570	ENSAMXG00000043291	-	77	62.570
ENSAMXG00000042593	-	98	60.738	ENSAMXG00000040677	-	94	60.738
ENSAMXG00000042593	-	91	51.020	ENSAMXG00000012589	-	83	51.020
ENSAMXG00000042593	-	90	43.636	ENSAMXG00000015228	-	64	43.636
ENSAMXG00000042593	-	92	63.946	ENSAMXG00000036241	-	82	63.946
ENSAMXG00000042593	-	90	49.802	ENSAMXG00000035127	-	99	49.020
ENSAMXG00000042593	-	96	44.561	ENSAMXG00000014745	-	82	48.039
ENSAMXG00000042593	-	95	66.525	ENSAMXG00000009558	-	94	66.525
ENSAMXG00000042593	-	91	37.716	ENSAMXG00000039622	zbtb41	54	37.716
ENSAMXG00000042593	-	98	63.095	ENSAMXG00000037709	-	88	63.095
ENSAMXG00000042593	-	90	46.667	ENSAMXG00000037544	GFI1B	50	46.667
ENSAMXG00000042593	-	90	59.524	ENSAMXG00000037143	-	94	59.524
ENSAMXG00000042593	-	91	52.688	ENSAMXG00000034857	-	78	52.688
ENSAMXG00000042593	-	90	67.105	ENSAMXG00000018161	-	95	67.105
ENSAMXG00000042593	-	93	66.667	ENSAMXG00000029878	-	98	66.667
ENSAMXG00000042593	-	90	65.902	ENSAMXG00000039162	-	94	65.902
ENSAMXG00000042593	-	95	68.858	ENSAMXG00000041404	-	96	68.966
ENSAMXG00000042593	-	92	56.667	ENSAMXG00000026143	-	97	57.096
ENSAMXG00000042593	-	98	57.634	ENSAMXG00000026144	-	97	63.095
ENSAMXG00000042593	-	90	52.817	ENSAMXG00000035286	si:ch1073-224n8.1	90	41.697
ENSAMXG00000042593	-	90	62.963	ENSAMXG00000038324	-	78	62.963
ENSAMXG00000042593	-	92	66.667	ENSAMXG00000003002	-	91	66.667
ENSAMXG00000042593	-	93	61.238	ENSAMXG00000044110	-	89	61.238
ENSAMXG00000042593	-	99	49.425	ENSAMXG00000037382	-	58	49.425
ENSAMXG00000042593	-	95	59.420	ENSAMXG00000043302	-	74	59.420
ENSAMXG00000042593	-	93	66.779	ENSAMXG00000030911	-	66	66.779
ENSAMXG00000042593	-	90	67.300	ENSAMXG00000031501	-	89	67.300
ENSAMXG00000042593	-	94	57.589	ENSAMXG00000034344	-	82	57.589
ENSAMXG00000042593	-	92	47.826	ENSAMXG00000007973	-	97	47.489
ENSAMXG00000042593	-	91	63.607	ENSAMXG00000032619	-	97	63.607
ENSAMXG00000042593	-	90	64.262	ENSAMXG00000036849	-	82	64.262
ENSAMXG00000042593	-	90	66.426	ENSAMXG00000011804	-	86	66.426
ENSAMXG00000042593	-	95	68.197	ENSAMXG00000039879	-	97	68.197
ENSAMXG00000042593	-	92	62.763	ENSAMXG00000033201	-	84	65.894
ENSAMXG00000042593	-	97	55.700	ENSAMXG00000042174	-	92	58.689
ENSAMXG00000042593	-	98	61.364	ENSAMXG00000037923	-	99	61.364
ENSAMXG00000042593	-	92	59.839	ENSAMXG00000036257	-	94	59.839
ENSAMXG00000042593	-	90	65.455	ENSAMXG00000030963	-	64	65.455
ENSAMXG00000042593	-	92	60.106	ENSAMXG00000019489	-	93	60.106
ENSAMXG00000042593	-	98	60.000	ENSAMXG00000043978	-	95	60.481
ENSAMXG00000042593	-	93	67.869	ENSAMXG00000025965	-	96	67.869
ENSAMXG00000042593	-	90	39.936	ENSAMXG00000025761	-	91	39.936
ENSAMXG00000042593	-	99	33.058	ENSAMXG00000035525	znf646	92	33.058
ENSAMXG00000042593	-	92	42.492	ENSAMXG00000033299	-	74	42.492
ENSAMXG00000042593	-	92	60.513	ENSAMXG00000041650	-	87	60.513
ENSAMXG00000042593	-	99	59.524	ENSAMXG00000037717	-	99	59.524
ENSAMXG00000042593	-	92	66.230	ENSAMXG00000034958	-	93	66.230
ENSAMXG00000042593	-	90	62.621	ENSAMXG00000035145	-	65	62.621
ENSAMXG00000042593	-	92	66.230	ENSAMXG00000025452	-	99	66.230
ENSAMXG00000042593	-	92	39.860	ENSAMXG00000038235	snai2	54	39.860
ENSAMXG00000042593	-	90	45.545	ENSAMXG00000041862	-	94	45.545
ENSAMXG00000042593	-	94	43.254	ENSAMXG00000041864	prdm5	86	43.254
ENSAMXG00000042593	-	92	38.696	ENSAMXG00000024907	znf319b	85	37.719
ENSAMXG00000042593	-	99	64.050	ENSAMXG00000035949	-	84	64.050
ENSAMXG00000042593	-	90	66.960	ENSAMXG00000031646	-	95	66.960
ENSAMXG00000042593	-	90	43.056	ENSAMXG00000042191	zbtb47a	70	43.056
ENSAMXG00000042593	-	99	58.719	ENSAMXG00000043541	-	80	58.719
ENSAMXG00000042593	-	93	59.735	ENSAMXG00000009563	-	94	59.735
ENSAMXG00000042593	-	99	58.407	ENSAMXG00000041609	-	99	58.407
ENSAMXG00000042593	-	100	66.887	ENSAMXG00000017609	-	81	66.887
ENSAMXG00000042593	-	93	67.742	ENSAMXG00000000353	-	97	67.742
ENSAMXG00000042593	-	98	60.731	ENSAMXG00000042633	-	97	60.731
ENSAMXG00000042593	-	90	68.121	ENSAMXG00000024978	-	96	68.121
ENSAMXG00000042593	-	90	60.596	ENSAMXG00000036915	-	95	60.596
ENSAMXG00000042593	-	91	65.493	ENSAMXG00000031009	-	94	65.493
ENSAMXG00000042593	-	90	63.279	ENSAMXG00000031496	-	87	63.279
ENSAMXG00000042593	-	98	60.448	ENSAMXG00000042167	-	89	60.448
ENSAMXG00000042593	-	95	59.524	ENSAMXG00000039408	-	93	59.524
ENSAMXG00000042593	-	93	36.747	ENSAMXG00000032845	-	60	37.500
ENSAMXG00000042593	-	90	64.918	ENSAMXG00000009776	-	95	64.918
ENSAMXG00000042593	-	90	60.197	ENSAMXG00000039770	-	85	60.197
ENSAMXG00000042593	-	90	62.633	ENSAMXG00000039752	-	88	62.633
ENSAMXG00000042593	-	90	68.792	ENSAMXG00000036762	-	96	68.792
ENSAMXG00000042593	-	92	61.905	ENSAMXG00000033124	-	56	61.905
ENSAMXG00000042593	-	90	63.333	ENSAMXG00000038453	-	82	63.333
ENSAMXG00000042593	-	90	65.461	ENSAMXG00000029960	-	95	65.461
ENSAMXG00000042593	-	90	52.778	ENSAMXG00000038122	-	94	52.778
ENSAMXG00000042593	-	99	61.837	ENSAMXG00000039977	-	99	61.837
ENSAMXG00000042593	-	89	38.636	ENSAMXG00000038085	scrt1a	52	38.636
ENSAMXG00000042593	-	89	42.143	ENSAMXG00000034873	-	80	42.143
ENSAMXG00000042593	-	99	66.557	ENSAMXG00000040212	-	92	66.557
ENSAMXG00000042593	-	93	37.121	ENSAMXG00000042624	SCRT1	66	37.121
ENSAMXG00000042593	-	98	57.200	ENSAMXG00000038905	-	95	57.200
ENSAMXG00000042593	-	90	63.607	ENSAMXG00000010078	-	87	63.607
ENSAMXG00000042593	-	96	41.827	ENSAMXG00000035246	-	75	41.827
ENSAMXG00000042593	-	91	65.085	ENSAMXG00000042275	-	93	65.085
ENSAMXG00000042593	-	95	57.680	ENSAMXG00000038325	-	95	57.738
ENSAMXG00000042593	-	97	62.951	ENSAMXG00000010805	-	98	62.951
ENSAMXG00000042593	-	90	58.639	ENSAMXG00000043019	-	94	58.639
ENSAMXG00000042593	-	93	68.592	ENSAMXG00000041975	-	84	68.592
ENSAMXG00000042593	-	90	67.299	ENSAMXG00000035920	-	95	67.299
ENSAMXG00000042593	-	90	65.574	ENSAMXG00000033013	-	81	65.574
ENSAMXG00000042593	-	90	62.706	ENSAMXG00000039016	-	82	62.706
ENSAMXG00000042593	-	92	61.538	ENSAMXG00000036633	-	68	60.714
ENSAMXG00000042593	-	90	63.366	ENSAMXG00000017959	-	94	63.366
ENSAMXG00000042593	-	90	63.636	ENSAMXG00000040630	-	97	66.071
ENSAMXG00000042593	-	92	59.420	ENSAMXG00000032841	-	79	59.420
ENSAMXG00000042593	-	99	60.726	ENSAMXG00000032237	-	97	60.726
ENSAMXG00000042593	-	97	65.000	ENSAMXG00000041725	-	99	65.000
ENSAMXG00000042593	-	90	61.417	ENSAMXG00000030530	-	98	61.093
ENSAMXG00000042593	-	90	63.279	ENSAMXG00000039004	-	91	63.279
ENSAMXG00000042593	-	99	63.095	ENSAMXG00000031794	-	100	63.095
ENSAMXG00000042593	-	96	63.929	ENSAMXG00000035690	-	75	63.929
ENSAMXG00000042593	-	99	58.361	ENSAMXG00000038284	-	98	58.361
ENSAMXG00000042593	-	91	65.101	ENSAMXG00000010930	-	82	65.101
ENSAMXG00000042593	-	90	65.862	ENSAMXG00000031900	-	91	65.862
ENSAMXG00000042593	-	90	58.772	ENSAMXG00000042784	-	94	58.772
ENSAMXG00000042593	-	90	56.272	ENSAMXG00000030659	-	79	56.272
ENSAMXG00000042593	-	90	68.511	ENSAMXG00000037703	-	84	68.511
ENSAMXG00000042593	-	90	66.443	ENSAMXG00000038636	-	98	66.443
ENSAMXG00000042593	-	99	63.799	ENSAMXG00000039432	-	100	63.799
ENSAMXG00000042593	-	90	68.070	ENSAMXG00000008613	-	98	68.070
ENSAMXG00000042593	-	99	61.468	ENSAMXG00000038280	-	96	61.468
ENSAMXG00000042593	-	89	35.821	ENSAMXG00000034158	scrt2	54	35.821
ENSAMXG00000042593	-	90	60.656	ENSAMXG00000029109	-	87	60.656
ENSAMXG00000042593	-	92	63.745	ENSAMXG00000035437	-	98	62.295
ENSAMXG00000042593	-	92	61.421	ENSAMXG00000041721	-	76	61.421
ENSAMXG00000042593	-	90	67.541	ENSAMXG00000029178	-	100	67.541
ENSAMXG00000042593	-	90	63.399	ENSAMXG00000037326	-	91	63.399
ENSAMXG00000042593	-	90	60.791	ENSAMXG00000039182	-	64	60.791
ENSAMXG00000042593	-	91	60.396	ENSAMXG00000032212	-	86	60.396
ENSAMXG00000042593	-	90	61.679	ENSAMXG00000012604	-	96	61.679
ENSAMXG00000042593	-	90	65.778	ENSAMXG00000004610	-	96	65.778
ENSAMXG00000042593	-	92	63.959	ENSAMXG00000035683	-	94	63.959
ENSAMXG00000042593	-	100	35.211	ENSAMXG00000029059	-	91	38.182
ENSAMXG00000042593	-	91	60.194	ENSAMXG00000035875	-	99	60.194
ENSAMXG00000042593	-	98	65.233	ENSAMXG00000034402	-	98	65.233
ENSAMXG00000042593	-	91	54.255	ENSAMXG00000034333	-	88	54.255
ENSAMXG00000042593	-	96	43.210	ENSAMXG00000034934	-	92	43.210
ENSAMXG00000042593	-	93	64.706	ENSAMXG00000001626	-	94	64.706
ENSAMXG00000042593	-	90	60.360	ENSAMXG00000031489	-	91	62.951
ENSAMXG00000042593	-	97	41.573	ENSAMXG00000007441	-	65	41.573
ENSAMXG00000042593	-	94	59.398	ENSAMXG00000029783	-	87	59.108
ENSAMXG00000042593	-	90	63.448	ENSAMXG00000033500	-	94	64.590
ENSAMXG00000042593	-	99	61.257	ENSAMXG00000039700	-	95	61.257
ENSAMXG00000042593	-	98	57.028	ENSAMXG00000012873	-	94	59.160
ENSAMXG00000042593	-	93	67.541	ENSAMXG00000007092	-	99	67.541
ENSAMXG00000042593	-	93	66.557	ENSAMXG00000041865	-	99	66.557
ENSAMXG00000042593	-	90	62.360	ENSAMXG00000029161	-	81	62.360
ENSAMXG00000042593	-	96	66.885	ENSAMXG00000032457	-	93	66.885
ENSAMXG00000042593	-	90	69.281	ENSAMXG00000035809	-	99	69.281
ENSAMXG00000042593	-	90	52.381	ENSAMXG00000033252	-	97	47.273
ENSAMXG00000042593	-	91	68.197	ENSAMXG00000043251	-	95	68.197
ENSAMXG00000042593	-	100	64.333	ENSAMXG00000043423	-	80	64.333
ENSAMXG00000042593	-	92	61.224	ENSAMXG00000038536	-	84	61.639
ENSAMXG00000042593	-	91	34.615	ENSAMXG00000002273	patz1	55	32.800
ENSAMXG00000042593	-	90	67.041	ENSAMXG00000025455	-	99	67.041
ENSAMXG00000042593	-	95	63.667	ENSAMXG00000029828	-	97	63.667
ENSAMXG00000042593	-	92	67.347	ENSAMXG00000042774	-	99	67.347
ENSAMXG00000042593	-	90	60.396	ENSAMXG00000013274	-	100	59.310
ENSAMXG00000042593	-	91	39.216	ENSAMXG00000044034	-	69	39.216
ENSAMXG00000042593	-	92	36.471	ENSAMXG00000001155	si:dkey-89b17.4	82	36.471
ENSAMXG00000042593	-	95	68.197	ENSAMXG00000041128	-	87	68.197
ENSAMXG00000042593	-	90	67.213	ENSAMXG00000037885	-	97	67.213
ENSAMXG00000042593	-	90	45.139	ENSAMXG00000017199	-	50	45.139
ENSAMXG00000042593	-	99	62.827	ENSAMXG00000041861	-	94	62.827
ENSAMXG00000042593	-	90	68.197	ENSAMXG00000039744	-	99	68.197
ENSAMXG00000042593	-	90	59.615	ENSAMXG00000043178	-	65	59.615
ENSAMXG00000042593	-	99	59.302	ENSAMXG00000031307	-	74	59.302
ENSAMXG00000042593	-	95	65.677	ENSAMXG00000026142	-	93	65.677
ENSAMXG00000042593	-	92	62.857	ENSAMXG00000036233	-	81	62.857
ENSAMXG00000042593	-	95	47.101	ENSAMXG00000044096	-	92	47.101
ENSAMXG00000042593	-	98	50.909	ENSAMXG00000013492	-	98	48.780
ENSAMXG00000042593	-	90	63.176	ENSAMXG00000044028	-	98	63.176
ENSAMXG00000042593	-	91	44.828	ENSAMXG00000033001	-	52	44.828
ENSAMXG00000042593	-	90	65.138	ENSAMXG00000037760	-	95	65.138
ENSAMXG00000042593	-	90	67.586	ENSAMXG00000036567	-	84	67.586
ENSAMXG00000042593	-	92	53.782	ENSAMXG00000040806	-	90	53.782
ENSAMXG00000042593	-	90	59.016	ENSAMXG00000044107	-	87	59.016
ENSAMXG00000042593	-	99	56.202	ENSAMXG00000034096	-	91	52.817
ENSAMXG00000042593	-	90	67.391	ENSAMXG00000029518	-	52	63.830

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042593	-	92	46.711	ENSATEG00000010859	-	96	47.619	Anabas_testudineus
ENSAMXG00000042593	-	91	51.479	ENSCPBG00000009849	-	83	51.479	Chrysemys_picta_bellii
ENSAMXG00000042593	-	97	56.146	ENSELUG00000009575	-	100	53.420	Esox_lucius
ENSAMXG00000042593	-	99	61.538	ENSIPUG00000015121	-	63	61.538	Ictalurus_punctatus
ENSAMXG00000042593	-	97	47.860	ENSKMAG00000000543	-	95	45.574	Kryptolebias_marmoratus
ENSAMXG00000042593	-	91	42.202	ENSMAMG00000016519	-	87	44.667	Mastacembelus_armatus
ENSAMXG00000042593	-	92	46.815	ENSMZEG00005020574	-	84	46.815	Maylandia_zebra
ENSAMXG00000042593	-	90	41.503	ENSONIG00000007088	-	100	41.503	Oreochromis_niloticus
ENSAMXG00000042593	-	90	53.929	ENSPSIG00000000075	-	82	53.929	Pelodiscus_sinensis
ENSAMXG00000042593	-	90	61.943	ENSPNAG00000008480	-	89	64.214	Pygocentrus_nattereri
ENSAMXG00000042593	-	99	55.030	ENSPNAG00000012215	-	97	58.154	Pygocentrus_nattereri
ENSAMXG00000042593	-	94	41.967	ENSSMAG00000007396	-	86	41.967	Scophthalmus_maximus
ENSAMXG00000042593	-	90	58.451	ENSTBEG00000012287	-	99	58.451	Tupaia_belangeri