EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042605 (Gene tree)
Gene ID: 103045582
Gene Symbol: exosc2
Alias: fa97b01|wu:fa97b01|zgc:110117
Full Name: exosome component 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10582 bases
Position: chrAPWO02000139.1:3137080-3147661
Accession: 103045582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042671	ECR1_N	PF14382.6	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034617	-	6708	XM_007253991	ENSAMXP00000042671	295 (aa)	XP_007254053	UPI000BBDB148

Gene Model

Click here to download ENSAMXG00000042605's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042605	exosc2	100	80.339	ENSG00000130713	EXOSC2	100	80.339	Homo_sapiens
ENSAMXG00000042605	exosc2	90	87.925	ENSAPOG00000008861	exosc2	97	87.925	Acanthochromis_polyacanthus
ENSAMXG00000042605	exosc2	100	80.000	ENSAMEG00000016239	EXOSC2	100	80.000	Ailuropoda_melanoleuca
ENSAMXG00000042605	exosc2	100	87.797	ENSACIG00000019054	exosc2	100	87.797	Amphilophus_citrinellus
ENSAMXG00000042605	exosc2	100	87.458	ENSAOCG00000004983	exosc2	100	87.458	Amphiprion_ocellaris
ENSAMXG00000042605	exosc2	100	87.458	ENSAOCG00000008577	exosc2	100	87.458	Amphiprion_ocellaris
ENSAMXG00000042605	exosc2	100	87.458	ENSAPEG00000014088	exosc2	100	87.458	Amphiprion_percula
ENSAMXG00000042605	exosc2	100	87.797	ENSATEG00000018680	exosc2	100	87.797	Anabas_testudineus
ENSAMXG00000042605	exosc2	93	84.307	ENSAPLG00000012516	EXOSC2	94	84.307	Anas_platyrhynchos
ENSAMXG00000042605	exosc2	99	78.305	ENSACAG00000002706	EXOSC2	99	78.305	Anolis_carolinensis
ENSAMXG00000042605	exosc2	100	87.797	ENSACLG00000013613	exosc2	100	87.797	Astatotilapia_calliptera
ENSAMXG00000042605	exosc2	100	80.678	ENSBTAG00000048071	EXOSC2	100	80.678	Bos_taurus
ENSAMXG00000042605	exosc2	95	41.696	WBGene00022232	exos-2	93	41.696	Caenorhabditis_elegans
ENSAMXG00000042605	exosc2	100	80.339	ENSCJAG00000020537	EXOSC2	100	80.339	Callithrix_jacchus
ENSAMXG00000042605	exosc2	99	78.912	ENSCAFG00000019941	EXOSC2	99	78.912	Canis_familiaris
ENSAMXG00000042605	exosc2	100	78.983	ENSCAFG00020024047	EXOSC2	100	78.983	Canis_lupus_dingo
ENSAMXG00000042605	exosc2	100	81.017	ENSCHIG00000021398	EXOSC2	100	81.017	Capra_hircus
ENSAMXG00000042605	exosc2	100	80.339	ENSTSYG00000001805	EXOSC2	100	80.339	Carlito_syrichta
ENSAMXG00000042605	exosc2	100	76.254	ENSCPOG00000005902	EXOSC2	100	76.254	Cavia_porcellus
ENSAMXG00000042605	exosc2	100	80.339	ENSCCAG00000019749	EXOSC2	100	80.339	Cebus_capucinus
ENSAMXG00000042605	exosc2	100	80.339	ENSCATG00000025389	-	100	80.339	Cercocebus_atys
ENSAMXG00000042605	exosc2	100	80.000	ENSCLAG00000006195	EXOSC2	100	80.000	Chinchilla_lanigera
ENSAMXG00000042605	exosc2	100	80.339	ENSCSAG00000014760	EXOSC2	100	80.339	Chlorocebus_sabaeus
ENSAMXG00000042605	exosc2	100	79.322	ENSCHOG00000000858	EXOSC2	100	79.322	Choloepus_hoffmanni
ENSAMXG00000042605	exosc2	99	80.612	ENSCPBG00000022626	EXOSC2	99	80.612	Chrysemys_picta_bellii
ENSAMXG00000042605	exosc2	96	62.284	ENSCING00000014934	-	94	62.284	Ciona_intestinalis
ENSAMXG00000042605	exosc2	93	63.669	ENSCSAVG00000003684	-	100	63.669	Ciona_savignyi
ENSAMXG00000042605	exosc2	100	80.339	ENSCANG00000039828	-	100	80.339	Colobus_angolensis_palliatus
ENSAMXG00000042605	exosc2	99	72.789	ENSCANG00000029298	-	99	72.789	Colobus_angolensis_palliatus
ENSAMXG00000042605	exosc2	100	81.017	ENSCGRG00001013981	Exosc2	100	81.017	Cricetulus_griseus_chok1gshd
ENSAMXG00000042605	exosc2	100	81.017	ENSCGRG00000017629	Exosc2	100	81.017	Cricetulus_griseus_crigri
ENSAMXG00000042605	exosc2	100	86.441	ENSCSEG00000016539	exosc2	100	86.441	Cynoglossus_semilaevis
ENSAMXG00000042605	exosc2	100	87.119	ENSCVAG00000022260	exosc2	100	87.119	Cyprinodon_variegatus
ENSAMXG00000042605	exosc2	100	84.068	ENSDARG00000028688	exosc2	100	84.068	Danio_rerio
ENSAMXG00000042605	exosc2	91	79.554	ENSDNOG00000025767	-	100	79.554	Dasypus_novemcinctus
ENSAMXG00000042605	exosc2	100	80.000	ENSDORG00000009238	Exosc2	100	80.000	Dipodomys_ordii
ENSAMXG00000042605	exosc2	92	60.073	FBgn0034879	Rrp4	91	61.255	Drosophila_melanogaster
ENSAMXG00000042605	exosc2	94	67.148	ENSETEG00000016130	-	100	67.148	Echinops_telfairi
ENSAMXG00000042605	exosc2	100	80.000	ENSEASG00005008475	EXOSC2	86	80.000	Equus_asinus_asinus
ENSAMXG00000042605	exosc2	100	80.000	ENSECAG00000007897	EXOSC2	86	80.000	Equus_caballus
ENSAMXG00000042605	exosc2	100	90.847	ENSELUG00000013641	exosc2	100	90.847	Esox_lucius
ENSAMXG00000042605	exosc2	100	80.678	ENSFCAG00000025936	EXOSC2	100	80.678	Felis_catus
ENSAMXG00000042605	exosc2	99	77.551	ENSFALG00000001446	EXOSC2	99	77.551	Ficedula_albicollis
ENSAMXG00000042605	exosc2	100	78.644	ENSFDAG00000017196	EXOSC2	100	78.644	Fukomys_damarensis
ENSAMXG00000042605	exosc2	100	88.136	ENSFHEG00000018571	exosc2	100	88.136	Fundulus_heteroclitus
ENSAMXG00000042605	exosc2	100	83.446	ENSGMOG00000011785	exosc2	99	83.446	Gadus_morhua
ENSAMXG00000042605	exosc2	99	80.952	ENSGALG00000040373	EXOSC2	99	80.952	Gallus_gallus
ENSAMXG00000042605	exosc2	99	87.755	ENSGAFG00000010283	exosc2	99	87.755	Gambusia_affinis
ENSAMXG00000042605	exosc2	100	85.424	ENSGACG00000016805	exosc2	99	86.310	Gasterosteus_aculeatus
ENSAMXG00000042605	exosc2	89	82.955	ENSGAGG00000021026	EXOSC2	99	82.955	Gopherus_agassizii
ENSAMXG00000042605	exosc2	100	79.661	ENSGGOG00000010578	EXOSC2	100	79.661	Gorilla_gorilla
ENSAMXG00000042605	exosc2	100	88.475	ENSHBUG00000022437	exosc2	100	88.475	Haplochromis_burtoni
ENSAMXG00000042605	exosc2	100	79.322	ENSHGLG00000012834	EXOSC2	100	79.322	Heterocephalus_glaber_female
ENSAMXG00000042605	exosc2	100	79.322	ENSHGLG00100007092	EXOSC2	100	79.322	Heterocephalus_glaber_male
ENSAMXG00000042605	exosc2	100	86.102	ENSHCOG00000019130	exosc2	100	86.102	Hippocampus_comes
ENSAMXG00000042605	exosc2	100	91.525	ENSIPUG00000015397	exosc2	100	91.525	Ictalurus_punctatus
ENSAMXG00000042605	exosc2	100	80.339	ENSSTOG00000005999	EXOSC2	100	80.339	Ictidomys_tridecemlineatus
ENSAMXG00000042605	exosc2	100	80.000	ENSJJAG00000003188	Exosc2	100	80.000	Jaculus_jaculus
ENSAMXG00000042605	exosc2	99	86.054	ENSKMAG00000017397	exosc2	99	86.054	Kryptolebias_marmoratus
ENSAMXG00000042605	exosc2	100	85.424	ENSLBEG00000019269	exosc2	100	85.424	Labrus_bergylta
ENSAMXG00000042605	exosc2	100	82.712	ENSLACG00000015530	EXOSC2	100	82.712	Latimeria_chalumnae
ENSAMXG00000042605	exosc2	100	80.068	ENSLAFG00000006984	EXOSC2	100	80.068	Loxodonta_africana
ENSAMXG00000042605	exosc2	100	69.153	ENSMFAG00000034160	-	84	69.153	Macaca_fascicularis
ENSAMXG00000042605	exosc2	100	80.339	ENSMFAG00000000597	-	100	80.339	Macaca_fascicularis
ENSAMXG00000042605	exosc2	100	77.288	ENSMMUG00000012498	EXOSC2	100	77.288	Macaca_mulatta
ENSAMXG00000042605	exosc2	100	80.339	ENSMNEG00000031861	-	100	80.339	Macaca_nemestrina
ENSAMXG00000042605	exosc2	100	69.831	ENSMNEG00000028704	-	91	69.831	Macaca_nemestrina
ENSAMXG00000042605	exosc2	100	69.153	ENSMLEG00000029891	-	91	69.153	Mandrillus_leucophaeus
ENSAMXG00000042605	exosc2	100	80.339	ENSMLEG00000042587	-	100	80.339	Mandrillus_leucophaeus
ENSAMXG00000042605	exosc2	100	87.458	ENSMAMG00000012466	exosc2	100	87.458	Mastacembelus_armatus
ENSAMXG00000042605	exosc2	100	87.119	ENSMZEG00005018737	exosc2	100	87.119	Maylandia_zebra
ENSAMXG00000042605	exosc2	99	80.952	ENSMGAG00000005450	EXOSC2	99	80.952	Meleagris_gallopavo
ENSAMXG00000042605	exosc2	100	81.017	ENSMAUG00000008299	Exosc2	100	81.017	Mesocricetus_auratus
ENSAMXG00000042605	exosc2	100	80.678	ENSMICG00000015495	EXOSC2	100	80.678	Microcebus_murinus
ENSAMXG00000042605	exosc2	100	81.017	ENSMOCG00000008262	Exosc2	100	81.017	Microtus_ochrogaster
ENSAMXG00000042605	exosc2	100	86.441	ENSMMOG00000009616	exosc2	100	86.441	Mola_mola
ENSAMXG00000042605	exosc2	100	81.695	ENSMODG00000012114	EXOSC2	100	81.695	Monodelphis_domestica
ENSAMXG00000042605	exosc2	100	87.797	ENSMALG00000022132	exosc2	100	87.797	Monopterus_albus
ENSAMXG00000042605	exosc2	100	81.017	MGP_CAROLIEiJ_G0023415	Exosc2	100	81.017	Mus_caroli
ENSAMXG00000042605	exosc2	100	81.017	ENSMUSG00000039356	Exosc2	100	81.017	Mus_musculus
ENSAMXG00000042605	exosc2	100	81.017	MGP_PahariEiJ_G0024872	Exosc2	100	81.017	Mus_pahari
ENSAMXG00000042605	exosc2	100	81.017	MGP_SPRETEiJ_G0024332	Exosc2	100	81.017	Mus_spretus
ENSAMXG00000042605	exosc2	100	80.000	ENSMPUG00000012686	EXOSC2	100	80.000	Mustela_putorius_furo
ENSAMXG00000042605	exosc2	100	80.135	ENSMLUG00000008776	EXOSC2	100	80.135	Myotis_lucifugus
ENSAMXG00000042605	exosc2	100	79.661	ENSNGAG00000019383	Exosc2	100	79.661	Nannospalax_galili
ENSAMXG00000042605	exosc2	100	87.797	ENSNBRG00000005453	exosc2	100	87.797	Neolamprologus_brichardi
ENSAMXG00000042605	exosc2	100	80.339	ENSNLEG00000012533	EXOSC2	100	80.339	Nomascus_leucogenys
ENSAMXG00000042605	exosc2	100	64.068	ENSMEUG00000000795	EXOSC2	100	64.068	Notamacropus_eugenii
ENSAMXG00000042605	exosc2	65	84.615	ENSOPRG00000008688	EXOSC2	65	84.615	Ochotona_princeps
ENSAMXG00000042605	exosc2	100	78.644	ENSODEG00000016880	-	100	78.644	Octodon_degus
ENSAMXG00000042605	exosc2	86	81.496	ENSODEG00000019513	-	100	81.496	Octodon_degus
ENSAMXG00000042605	exosc2	100	88.136	ENSONIG00000014086	exosc2	100	88.136	Oreochromis_niloticus
ENSAMXG00000042605	exosc2	100	77.517	ENSOANG00000001044	EXOSC2	100	77.517	Ornithorhynchus_anatinus
ENSAMXG00000042605	exosc2	100	80.678	ENSOCUG00000007138	EXOSC2	100	80.678	Oryctolagus_cuniculus
ENSAMXG00000042605	exosc2	100	86.780	ENSORLG00000007443	exosc2	100	86.780	Oryzias_latipes
ENSAMXG00000042605	exosc2	100	86.780	ENSORLG00020018902	exosc2	100	86.780	Oryzias_latipes_hni
ENSAMXG00000042605	exosc2	100	87.119	ENSORLG00015006767	exosc2	100	87.119	Oryzias_latipes_hsok
ENSAMXG00000042605	exosc2	100	86.102	ENSOMEG00000003533	exosc2	100	86.102	Oryzias_melastigma
ENSAMXG00000042605	exosc2	100	81.017	ENSOGAG00000007558	EXOSC2	100	81.017	Otolemur_garnettii
ENSAMXG00000042605	exosc2	100	80.135	ENSOARG00000007438	EXOSC2	100	80.135	Ovis_aries
ENSAMXG00000042605	exosc2	100	80.339	ENSPPAG00000034796	EXOSC2	100	80.339	Pan_paniscus
ENSAMXG00000042605	exosc2	100	80.678	ENSPPRG00000001089	EXOSC2	100	80.678	Panthera_pardus
ENSAMXG00000042605	exosc2	100	80.678	ENSPTIG00000021163	EXOSC2	100	80.678	Panthera_tigris_altaica
ENSAMXG00000042605	exosc2	100	80.339	ENSPTRG00000021476	EXOSC2	100	80.339	Pan_troglodytes
ENSAMXG00000042605	exosc2	100	80.339	ENSPTRG00000045766	-	100	80.339	Pan_troglodytes
ENSAMXG00000042605	exosc2	100	80.339	ENSPANG00000025966	EXOSC2	100	80.339	Papio_anubis
ENSAMXG00000042605	exosc2	99	85.567	ENSPKIG00000004271	exosc2	98	85.567	Paramormyrops_kingsleyae
ENSAMXG00000042605	exosc2	99	80.952	ENSPSIG00000006743	EXOSC2	99	80.952	Pelodiscus_sinensis
ENSAMXG00000042605	exosc2	86	88.538	ENSPMGG00000010980	exosc2	99	88.538	Periophthalmus_magnuspinnatus
ENSAMXG00000042605	exosc2	100	81.017	ENSPEMG00000006345	Exosc2	100	81.017	Peromyscus_maniculatus_bairdii
ENSAMXG00000042605	exosc2	100	76.949	ENSPMAG00000001280	exosc2	100	76.949	Petromyzon_marinus
ENSAMXG00000042605	exosc2	100	81.356	ENSPCIG00000024122	EXOSC2	97	81.356	Phascolarctos_cinereus
ENSAMXG00000042605	exosc2	99	87.119	ENSPFOG00000019819	exosc2	99	87.119	Poecilia_formosa
ENSAMXG00000042605	exosc2	99	87.415	ENSPLAG00000004605	exosc2	99	87.415	Poecilia_latipinna
ENSAMXG00000042605	exosc2	99	87.415	ENSPMEG00000010976	exosc2	99	87.415	Poecilia_mexicana
ENSAMXG00000042605	exosc2	99	87.415	ENSPREG00000014306	exosc2	99	87.415	Poecilia_reticulata
ENSAMXG00000042605	exosc2	100	80.678	ENSPPYG00000019695	EXOSC2	100	80.678	Pongo_abelii
ENSAMXG00000042605	exosc2	100	81.017	ENSPCAG00000013400	EXOSC2	100	81.017	Procavia_capensis
ENSAMXG00000042605	exosc2	100	80.339	ENSPCOG00000017639	EXOSC2	100	80.339	Propithecus_coquereli
ENSAMXG00000042605	exosc2	100	78.983	ENSPVAG00000001513	EXOSC2	100	78.983	Pteropus_vampyrus
ENSAMXG00000042605	exosc2	100	88.475	ENSPNYG00000007383	exosc2	100	88.475	Pundamilia_nyererei
ENSAMXG00000042605	exosc2	100	94.237	ENSPNAG00000014281	exosc2	100	94.237	Pygocentrus_nattereri
ENSAMXG00000042605	exosc2	100	80.339	ENSRNOG00000009245	Exosc2	100	80.339	Rattus_norvegicus
ENSAMXG00000042605	exosc2	99	73.129	ENSRBIG00000029791	-	99	73.129	Rhinopithecus_bieti
ENSAMXG00000042605	exosc2	100	80.339	ENSRBIG00000031203	-	100	80.339	Rhinopithecus_bieti
ENSAMXG00000042605	exosc2	100	80.339	ENSRROG00000010827	-	100	80.339	Rhinopithecus_roxellana
ENSAMXG00000042605	exosc2	99	72.109	ENSRROG00000043609	-	99	72.109	Rhinopithecus_roxellana
ENSAMXG00000042605	exosc2	87	41.096	YHR069C	-	81	41.096	Saccharomyces_cerevisiae
ENSAMXG00000042605	exosc2	100	80.000	ENSSBOG00000022712	EXOSC2	100	80.000	Saimiri_boliviensis_boliviensis
ENSAMXG00000042605	exosc2	100	81.695	ENSSHAG00000016050	EXOSC2	100	81.695	Sarcophilus_harrisii
ENSAMXG00000042605	exosc2	100	88.136	ENSSFOG00015011245	exosc2	100	88.136	Scleropages_formosus
ENSAMXG00000042605	exosc2	100	86.441	ENSSMAG00000003112	exosc2	100	86.441	Scophthalmus_maximus
ENSAMXG00000042605	exosc2	100	86.577	ENSSDUG00000004634	exosc2	100	86.577	Seriola_dumerili
ENSAMXG00000042605	exosc2	100	87.458	ENSSLDG00000010616	exosc2	100	87.458	Seriola_lalandi_dorsalis
ENSAMXG00000042605	exosc2	99	79.322	ENSSPUG00000013391	EXOSC2	99	79.322	Sphenodon_punctatus
ENSAMXG00000042605	exosc2	100	87.458	ENSSPAG00000022947	exosc2	100	87.458	Stegastes_partitus
ENSAMXG00000042605	exosc2	100	81.356	ENSSSCG00000005704	EXOSC2	100	81.356	Sus_scrofa
ENSAMXG00000042605	exosc2	99	77.211	ENSTGUG00000004697	EXOSC2	99	77.211	Taeniopygia_guttata
ENSAMXG00000042605	exosc2	100	80.000	ENSTRUG00000022436	exosc2	100	80.000	Takifugu_rubripes
ENSAMXG00000042605	exosc2	100	75.932	ENSTTRG00000015159	EXOSC2	100	75.932	Tursiops_truncatus
ENSAMXG00000042605	exosc2	94	78.777	ENSUAMG00000009651	EXOSC2	97	78.777	Ursus_americanus
ENSAMXG00000042605	exosc2	100	80.339	ENSUMAG00000018726	EXOSC2	100	80.339	Ursus_maritimus
ENSAMXG00000042605	exosc2	100	78.983	ENSVVUG00000027665	EXOSC2	100	78.983	Vulpes_vulpes
ENSAMXG00000042605	exosc2	100	78.644	ENSXETG00000001340	exosc2	100	78.644	Xenopus_tropicalis
ENSAMXG00000042605	exosc2	99	87.075	ENSXMAG00000005265	exosc2	99	87.075	Xiphophorus_maculatus