EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000042612 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
7025 bases
Position
chrAPWO02000729.1:45111-52135
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000047080ResIIIPF04851.155.5e-0711
ENSAMXP00000047080DEADPF00270.298.5e-4711
ENSAMXP00000034680DEADPF00270.299e-4711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000040066-1356-ENSAMXP00000047080452 (aa)--
ENSAMXT00000031571-1476-ENSAMXP00000034680492 (aa)--
Gene Model
Click here to download ENSAMXG00000042612's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042612's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000042612-7931.148ENSAMXG00000015550DDX56831.229
ENSAMXG00000042612-8133.245ENSAMXG00000009140ddx215833.175
ENSAMXG00000042612-7931.421ENSAMXG00000004466ddx55532.277
ENSAMXG00000042612-6931.476ENSAMXG00000001507ddx515131.476
ENSAMXG00000042612-8233.333ENSAMXG00000019947ddx556233.506
ENSAMXG00000042612-7836.667ENSAMXG00000016919ddx497436.667
ENSAMXG00000042612-8031.129ENSAMXG00000033980-7231.129
ENSAMXG00000042612-7331.307ENSAMXG00000019553ddx66631.307
ENSAMXG00000042612-6630.793ENSAMXG00000040730eif4a1b8031.176
ENSAMXG00000042612-7530.259ENSAMXG00000015256-7930.259
ENSAMXG00000042612-7332.121ENSAMXG00000032542ddx616632.121
ENSAMXG00000042612-8131.915ENSAMXG00000019126eif4a28233.051
ENSAMXG00000042612-7832.782ENSAMXG00000010288ddx45432.782
ENSAMXG00000042612-7530.925ENSAMXG00000018631DDX39A7930.925
ENSAMXG00000042612-8030.959ENSAMXG00000020882eif4a39030.959
ENSAMXG00000042612-8133.943ENSAMXG00000002956DDX416134.301
ENSAMXG00000042612-7639.067ENSAMXG00000010727ddx477139.067
ENSAMXG00000042612-8032.718ENSAMXG00000013396ddx3xb5434.431
ENSAMXG00000042612-7533.239ENSAMXG00000004457ddx435332.493
ENSAMXG00000042612-7832.915ENSAMXG00000009673ddx315932.593
ENSAMXG00000042612-7831.844ENSAMXG00000030251eif4a1a8233.235
ENSAMXG00000042612-97100.000ENSAMXG00000024269ddx187685.662
ENSAMXG00000042612-7931.892ENSAMXG00000024377ddx526131.525
ENSAMXG00000042612-6630.492ENSAMXG00000042015-9430.492
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000042612-9284.161ENSG00000088205DDX189984.416Homo_sapiens
ENSAMXG00000042612-9694.805ENSAPOG00000019022ddx186496.000Acanthochromis_polyacanthus
ENSAMXG00000042612-9380.430ENSAMEG00000012626DDX185785.195Ailuropoda_melanoleuca
ENSAMXG00000042612-9779.400ENSACIG00000018534ddx188178.968Amphilophus_citrinellus
ENSAMXG00000042612-9694.805ENSAOCG00000012438ddx186296.000Amphiprion_ocellaris
ENSAMXG00000042612-9694.805ENSAPEG00000002348ddx186296.000Amphiprion_percula
ENSAMXG00000042612-9783.544ENSATEG00000006330ddx187984.810Anabas_testudineus
ENSAMXG00000042612-8790.331ENSAPLG00000011648DDX187491.948Anas_platyrhynchos
ENSAMXG00000042612-8890.201ENSACAG00000002045DDX187775.000Anolis_carolinensis
ENSAMXG00000042612-9084.783ENSANAG00000037489-5689.091Aotus_nancymaae
ENSAMXG00000042612-9060.934ENSANAG00000034318-6558.118Aotus_nancymaae
ENSAMXG00000042612-9084.521ENSANAG00000024417-5888.052Aotus_nancymaae
ENSAMXG00000042612-9063.971ENSANAG00000025869-5466.321Aotus_nancymaae
ENSAMXG00000042612-8668.992ENSANAG00000026802-5871.117Aotus_nancymaae
ENSAMXG00000042612-8594.778ENSACLG00000000352ddx186294.545Astatotilapia_calliptera
ENSAMXG00000042612-9085.230ENSBTAG00000015077-5789.870Bos_taurus
ENSAMXG00000042612-9085.230ENSBTAG00000027319-5689.870Bos_taurus
ENSAMXG00000042612-8270.889WBGene00015232B0511.66970.133Caenorhabditis_elegans
ENSAMXG00000042612-9185.266ENSCJAG00000021414DDX185790.130Callithrix_jacchus
ENSAMXG00000042612-9185.922ENSCAFG00000004950DDX185889.870Canis_familiaris
ENSAMXG00000042612-9185.680ENSCAFG00020014114DDX185889.610Canis_lupus_dingo
ENSAMXG00000042612-9186.375ENSCHIG00000019280DDX186090.130Capra_hircus
ENSAMXG00000042612-9383.412ENSTSYG00000002540DDX185789.351Carlito_syrichta
ENSAMXG00000042612-8887.250ENSCAPG00000004039DDX186588.462Cavia_aperea
ENSAMXG00000042612-9285.749ENSCPOG00000007532DDX185990.130Cavia_porcellus
ENSAMXG00000042612-9185.507ENSCCAG00000023595-6890.716Cebus_capucinus
ENSAMXG00000042612-9857.800ENSCCAG00000028017-6862.529Cebus_capucinus
ENSAMXG00000042612-9167.718ENSCCAG00000018129-6570.390Cebus_capucinus
ENSAMXG00000042612-9284.634ENSCATG00000036838DDX185790.390Cercocebus_atys
ENSAMXG00000042612-9157.971ENSCATG00000033079-5860.519Cercocebus_atys
ENSAMXG00000042612-9286.058ENSCLAG00000004684DDX185790.649Chinchilla_lanigera
ENSAMXG00000042612-9284.397ENSCSAG00000016508DDX185790.390Chlorocebus_sabaeus
ENSAMXG00000042612-7390.332ENSCHOG00000004191DDX185290.332Choloepus_hoffmanni
ENSAMXG00000042612-9484.527ENSCPBG00000010529DDX185792.208Chrysemys_picta_bellii
ENSAMXG00000042612-8382.888ENSCING00000022650-6082.888Ciona_intestinalis
ENSAMXG00000042612-9375.000ENSCSAVG00000004895-7181.217Ciona_savignyi
ENSAMXG00000042612-9266.825ENSCANG00000028903-5571.094Colobus_angolensis_palliatus
ENSAMXG00000042612-9284.161ENSCANG00000021885-5790.130Colobus_angolensis_palliatus
ENSAMXG00000042612-9274.704ENSCANG00000019507-5479.740Colobus_angolensis_palliatus
ENSAMXG00000042612-9359.434ENSCANG00000043728-6163.117Colobus_angolensis_palliatus
ENSAMXG00000042612-9184.951ENSCGRG00001010803-5990.130Cricetulus_griseus_chok1gshd
ENSAMXG00000042612-9375.116ENSCGRG00001016185-6480.307Cricetulus_griseus_chok1gshd
ENSAMXG00000042612-9375.116ENSCGRG00000013152-6480.307Cricetulus_griseus_crigri
ENSAMXG00000042612-9184.951ENSCGRG00000008440-6089.817Cricetulus_griseus_crigri
ENSAMXG00000042612-9293.766ENSCSEG00000015266ddx185793.766Cynoglossus_semilaevis
ENSAMXG00000042612-9790.769ENSCVAG00000017936ddx188171.429Cyprinodon_variegatus
ENSAMXG00000042612-9791.852ENSDARG00000030789ddx188276.592Danio_rerio
ENSAMXG00000042612-8786.835ENSDNOG00000019096-7088.281Dasypus_novemcinctus
ENSAMXG00000042612-9773.633ENSDORG00000011340Ddx188172.978Dipodomys_ordii
ENSAMXG00000042612-8379.947FBgn0266581pit5579.947Drosophila_melanogaster
ENSAMXG00000042612-6788.542ENSEBUG00000006265ddx186788.542Eptatretus_burgeri
ENSAMXG00000042612-9284.323ENSECAG00000015740DDX185990.130Equus_caballus
ENSAMXG00000042612-8390.426ENSEEUG00000000322DDX185789.474Erinaceus_europaeus
ENSAMXG00000042612-9793.606ENSELUG00000008640ddx185894.041Esox_lucius
ENSAMXG00000042612-9283.886ENSFCAG00000000753DDX185790.130Felis_catus
ENSAMXG00000042612-8592.208ENSFALG00000013672DDX185892.208Ficedula_albicollis
ENSAMXG00000042612-9285.577ENSFDAG00000014703DDX185190.130Fukomys_damarensis
ENSAMXG00000042612-5586.224ENSFHEG00000008442ddx187657.849Fundulus_heteroclitus
ENSAMXG00000042612-9782.273ENSGMOG00000007113ddx187189.501Gadus_morhua
ENSAMXG00000042612-9086.635ENSGALG00000012147DDX185892.208Gallus_gallus
ENSAMXG00000042612-8390.716ENSGAFG00000019028ddx186589.764Gambusia_affinis
ENSAMXG00000042612-9794.286ENSGACG00000001563ddx187983.691Gasterosteus_aculeatus
ENSAMXG00000042612-9283.924ENSGGOG00000028420DDX185790.649Gorilla_gorilla
ENSAMXG00000042612-8969.383ENSGGOG00000039210-6273.333Gorilla_gorilla
ENSAMXG00000042612-8770.202ENSGGOG00000040382-5474.114Gorilla_gorilla
ENSAMXG00000042612-9494.778ENSHBUG00000001204ddx188274.109Haplochromis_burtoni
ENSAMXG00000042612-9384.524ENSHGLG00000016324-6582.831Heterocephalus_glaber_female
ENSAMXG00000042612-8874.505ENSHGLG00000005983-5977.403Heterocephalus_glaber_female
ENSAMXG00000042612-9384.524ENSHGLG00100001563DDX186582.831Heterocephalus_glaber_male
ENSAMXG00000042612-9882.822ENSHCOG00000007568ddx188082.209Hippocampus_comes
ENSAMXG00000042612-9085.961ENSSTOG00000010541DDX185990.130Ictidomys_tridecemlineatus
ENSAMXG00000042612-8585.714ENSJJAG00000017042-5885.714Jaculus_jaculus
ENSAMXG00000042612-8585.455ENSJJAG00000023769-5885.455Jaculus_jaculus
ENSAMXG00000042612-9783.900ENSKMAG00000005975ddx189281.356Kryptolebias_marmoratus
ENSAMXG00000042612-9794.805ENSLBEG00000027227ddx1863100.000Labrus_bergylta
ENSAMXG00000042612-9791.832ENSLBEG00000023115DDX1867100.000Labrus_bergylta
ENSAMXG00000042612-8591.645ENSLACG00000015308DDX186691.645Latimeria_chalumnae
ENSAMXG00000042612-8594.026ENSLOCG00000003108ddx185894.041Lepisosteus_oculatus
ENSAMXG00000042612-9482.710ENSLAFG00000006915DDX185889.351Loxodonta_africana
ENSAMXG00000042612-9284.397ENSMFAG00000043075DDX185790.390Macaca_fascicularis
ENSAMXG00000042612-9364.539ENSMFAG00000035685-5968.831Macaca_fascicularis
ENSAMXG00000042612-9279.009ENSMMUG00000021343DDX185784.456Macaca_mulatta
ENSAMXG00000042612-9163.768ENSMMUG00000029623-5966.753Macaca_mulatta
ENSAMXG00000042612-9284.397ENSMNEG00000032172DDX185790.390Macaca_nemestrina
ENSAMXG00000042612-9259.859ENSMNEG00000031049-5963.402Macaca_nemestrina
ENSAMXG00000042612-9284.397ENSMLEG00000038065DDX185790.390Mandrillus_leucophaeus
ENSAMXG00000042612-9070.025ENSMLEG00000029597-6171.169Mandrillus_leucophaeus
ENSAMXG00000042612-9294.256ENSMAMG00000009100ddx188082.083Mastacembelus_armatus
ENSAMXG00000042612-9294.778ENSMZEG00005013189ddx188177.470Maylandia_zebra
ENSAMXG00000042612-9186.874ENSMGAG00000012345DDX187384.527Meleagris_gallopavo
ENSAMXG00000042612-9285.024ENSMAUG00000015244Ddx185990.390Mesocricetus_auratus
ENSAMXG00000042612-9284.161ENSMICG00000047072-5790.130Microcebus_murinus
ENSAMXG00000042612-8472.656ENSMICG00000027163-5285.342Microcebus_murinus
ENSAMXG00000042612-8783.123ENSMOCG00000013664-6184.935Microtus_ochrogaster
ENSAMXG00000042612-9081.265ENSMOCG00000019953-5884.715Microtus_ochrogaster
ENSAMXG00000042612-9077.349ENSMOCG00000012842-5782.857Microtus_ochrogaster
ENSAMXG00000042612-9784.580ENSMMOG00000019289ddx187291.864Mola_mola
ENSAMXG00000042612-9184.397ENSMODG00000000533DDX186490.390Monodelphis_domestica
ENSAMXG00000042612-9793.000ENSMALG00000008644ddx186095.065Monopterus_albus
ENSAMXG00000042612-9183.777MGP_CAROLIEiJ_G0014529Ddx185889.091Mus_caroli
ENSAMXG00000042612-9085.749ENSMUSG00000001674Ddx185889.870Mus_musculus
ENSAMXG00000042612-9085.749MGP_PahariEiJ_G0027765Ddx185889.870Mus_pahari
ENSAMXG00000042612-9085.749MGP_SPRETEiJ_G0015336Ddx185989.870Mus_spretus
ENSAMXG00000042612-8370.370ENSMPUG00000000414-8569.634Mustela_putorius_furo
ENSAMXG00000042612-9283.491ENSMPUG00000000856-5789.870Mustela_putorius_furo
ENSAMXG00000042612-9185.680ENSMLUG00000017607DDX185789.091Myotis_lucifugus
ENSAMXG00000042612-8885.926ENSNGAG00000005624Ddx185988.010Nannospalax_galili
ENSAMXG00000042612-9185.990ENSNLEG00000011769DDX185790.649Nomascus_leucogenys
ENSAMXG00000042612-9261.871ENSNLEG00000032874-5965.455Nomascus_leucogenys
ENSAMXG00000042612-9469.725ENSNLEG00000034294-5975.448Nomascus_leucogenys
ENSAMXG00000042612-9566.051ENSNLEG00000034613-5971.429Nomascus_leucogenys
ENSAMXG00000042612-8873.232ENSNLEG00000027282-6474.805Nomascus_leucogenys
ENSAMXG00000042612-8377.128ENSMEUG00000011419-5677.128Notamacropus_eugenii
ENSAMXG00000042612-8788.832ENSOPRG00000001701DDX185890.130Ochotona_princeps
ENSAMXG00000042612-9285.577ENSODEG00000007330DDX185890.390Octodon_degus
ENSAMXG00000042612-9794.778ENSONIG00000007887ddx188176.548Oreochromis_niloticus
ENSAMXG00000042612-8556.510ENSOCUG00000023972-7556.510Oryctolagus_cuniculus
ENSAMXG00000042612-9682.719ENSOCUG00000012586-5889.896Oryctolagus_cuniculus
ENSAMXG00000042612-9592.987ENSORLG00000008090ddx186492.987Oryzias_latipes
ENSAMXG00000042612-9593.247ENSORLG00020022308ddx186496.154Oryzias_latipes_hni
ENSAMXG00000042612-9592.987ENSORLG00015023091ddx186492.987Oryzias_latipes_hsok
ENSAMXG00000042612-9193.211ENSOMEG00000017773ddx186392.987Oryzias_melastigma
ENSAMXG00000042612-8589.610ENSOGAG00000007237DDX185789.610Otolemur_garnettii
ENSAMXG00000042612-8788.832ENSOARG00000012040DDX185290.130Ovis_aries
ENSAMXG00000042612-9185.507ENSPPAG00000033473DDX185889.870Pan_paniscus
ENSAMXG00000042612-9167.150ENSPPAG00000030501-5177.083Pan_paniscus
ENSAMXG00000042612-9283.886ENSPPRG00000006406DDX185790.130Panthera_pardus
ENSAMXG00000042612-9283.886ENSPTIG00000004868DDX185790.130Panthera_tigris_altaica
ENSAMXG00000042612-8769.444ENSPTRG00000045036-5573.297Pan_troglodytes
ENSAMXG00000042612-9185.749ENSPTRG00000012391DDX185890.130Pan_troglodytes
ENSAMXG00000042612-8770.812ENSPTRG00000047092-6371.948Pan_troglodytes
ENSAMXG00000042612-9167.150ENSPANG00000031669-5870.390Papio_anubis
ENSAMXG00000042612-9283.924ENSPANG00000019899DDX185790.130Papio_anubis
ENSAMXG00000042612-9786.758ENSPKIG00000001118ddx185894.041Paramormyrops_kingsleyae
ENSAMXG00000042612-9284.346ENSPSIG00000002977DDX186391.169Pelodiscus_sinensis
ENSAMXG00000042612-9783.229ENSPMGG00000007162ddx187983.229Periophthalmus_magnuspinnatus
ENSAMXG00000042612-9185.749ENSPEMG00000010438-5890.130Peromyscus_maniculatus_bairdii
ENSAMXG00000042612-9184.615ENSPMAG00000009147ddx187087.692Petromyzon_marinus
ENSAMXG00000042612-9384.834ENSPCIG00000029015DDX186090.390Phascolarctos_cinereus
ENSAMXG00000042612-9775.697ENSPFOG00000000969ddx186290.649Poecilia_formosa
ENSAMXG00000042612-9782.805ENSPLAG00000005210ddx187288.743Poecilia_latipinna
ENSAMXG00000042612-9775.498ENSPMEG00000014773ddx186884.309Poecilia_mexicana
ENSAMXG00000042612-9284.161ENSPPYG00000012796DDX186990.130Pongo_abelii
ENSAMXG00000042612-9483.333ENSPCOG00000016210DDX185790.130Propithecus_coquereli
ENSAMXG00000042612-9384.010ENSPVAG00000006823DDX185889.351Pteropus_vampyrus
ENSAMXG00000042612-9594.778ENSPNYG00000016437ddx185994.545Pundamilia_nyererei
ENSAMXG00000042612-9697.143ENSPNAG00000024239ddx186297.150Pygocentrus_nattereri
ENSAMXG00000042612-8887.688ENSRNOG00000025430Ddx185789.610Rattus_norvegicus
ENSAMXG00000042612-8954.815ENSRBIG00000038208-5156.510Rhinopithecus_bieti
ENSAMXG00000042612-8788.579ENSRBIG00000036313DDX185890.155Rhinopithecus_bieti
ENSAMXG00000042612-9353.318ENSRBIG00000033443-5456.477Rhinopithecus_bieti
ENSAMXG00000042612-8788.579ENSRROG00000007370DDX185890.155Rhinopithecus_roxellana
ENSAMXG00000042612-8951.358ENSRROG00000030803-5052.865Rhinopithecus_roxellana
ENSAMXG00000042612-8068.407YMR290C-7268.407Saccharomyces_cerevisiae
ENSAMXG00000042612-9067.317ENSSBOG00000035646-5770.390Saimiri_boliviensis_boliviensis
ENSAMXG00000042612-9761.159ENSSBOG00000034289-8461.588Saimiri_boliviensis_boliviensis
ENSAMXG00000042612-9185.437ENSSHAG00000018781DDX188171.954Sarcophilus_harrisii
ENSAMXG00000042612-9593.995ENSSFOG00015022557ddx185593.995Scleropages_formosus
ENSAMXG00000042612-9693.199ENSSMAG00000001652ddx186196.000Scophthalmus_maximus
ENSAMXG00000042612-9493.540ENSSDUG00000005957ddx186196.000Seriola_dumerili
ENSAMXG00000042612-8693.540ENSSLDG00000003692ddx186893.766Seriola_lalandi_dorsalis
ENSAMXG00000042612-8390.957ENSSARG00000005248DDX187690.957Sorex_araneus
ENSAMXG00000042612-8890.404ENSSPUG00000016098DDX186091.688Sphenodon_punctatus
ENSAMXG00000042612-9394.545ENSSPAG00000023389ddx185894.545Stegastes_partitus
ENSAMXG00000042612-9185.645ENSSSCG00000015712DDX185679.007Sus_scrofa
ENSAMXG00000042612-8986.603ENSTGUG00000011611DDX187191.948Taeniopygia_guttata
ENSAMXG00000042612-9386.417ENSTRUG00000005649ddx188173.271Takifugu_rubripes
ENSAMXG00000042612-9793.404ENSTNIG00000017834ddx186993.506Tetraodon_nigroviridis
ENSAMXG00000042612-8768.367ENSTBEG00000016543DDX186169.091Tupaia_belangeri
ENSAMXG00000042612-9183.215ENSTTRG00000015218DDX185788.571Tursiops_truncatus
ENSAMXG00000042612-9185.922ENSUAMG00000016457DDX186289.974Ursus_americanus
ENSAMXG00000042612-9185.922ENSUMAG00000013505DDX185889.870Ursus_maritimus
ENSAMXG00000042612-6389.789ENSVPAG00000004214-5789.789Vicugna_pacos
ENSAMXG00000042612-8563.402ENSXETG00000020819ddx188163.307Xenopus_tropicalis
ENSAMXG00000042612-8382.353ENSXCOG00000015361ddx189678.610Xiphophorus_couchianus
ENSAMXG00000042612-9775.494ENSXMAG00000018003ddx186884.075Xiphophorus_maculatus

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