EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042633 (Gene tree)
Gene ID: 103040816
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1095 bases
Position: chrAPWO02000076.1:90588-91682
Accession: 103040816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	1	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	2	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	3	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	4	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	5	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	6	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	7	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	8	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	9	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	10	11
ENSAMXP00000048505	zf-C2H2	PF00096.26	1.4e-66	11	11
ENSAMXP00000048505	zf-met	PF12874.7	5.7e-17	1	2
ENSAMXP00000048505	zf-met	PF12874.7	5.7e-17	2	2
ENSAMXP00000048505	zf-C2H2_jaz	PF12171.8	1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031644	-	1095	XM_022666734	ENSAMXP00000048505	364 (aa)	XP_022522455	UPI000BBD868D

Gene Model

Click here to download ENSAMXG00000042633's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042633	-	95	55.639	ENSAMXG00000043178	-	68	55.639
ENSAMXG00000042633	-	92	36.296	ENSAMXG00000038235	snai2	54	36.296
ENSAMXG00000042633	-	96	69.281	ENSAMXG00000008613	-	97	69.281
ENSAMXG00000042633	-	96	53.333	ENSAMXG00000029518	-	55	63.043
ENSAMXG00000042633	-	91	56.364	ENSAMXG00000042784	-	94	56.364
ENSAMXG00000042633	-	97	34.848	ENSAMXG00000042624	SCRT1	54	34.848
ENSAMXG00000042633	-	97	59.940	ENSAMXG00000031844	-	98	59.940
ENSAMXG00000042633	-	97	59.451	ENSAMXG00000035437	-	99	59.451
ENSAMXG00000042633	-	98	60.455	ENSAMXG00000044110	-	88	63.030
ENSAMXG00000042633	-	96	59.946	ENSAMXG00000032619	-	99	59.673
ENSAMXG00000042633	-	96	65.109	ENSAMXG00000000353	-	94	65.109
ENSAMXG00000042633	-	96	48.913	ENSAMXG00000014745	-	82	48.913
ENSAMXG00000042633	-	98	54.400	ENSAMXG00000038905	-	98	54.400
ENSAMXG00000042633	-	96	64.214	ENSAMXG00000039182	-	64	64.214
ENSAMXG00000042633	-	92	45.562	ENSAMXG00000044096	-	80	45.562
ENSAMXG00000042633	-	95	62.400	ENSAMXG00000037981	-	75	62.400
ENSAMXG00000042633	-	98	54.225	ENSAMXG00000035286	si:ch1073-224n8.1	90	48.387
ENSAMXG00000042633	-	93	64.474	ENSAMXG00000039881	-	50	55.521
ENSAMXG00000042633	-	91	49.511	ENSAMXG00000034857	-	75	50.000
ENSAMXG00000042633	-	92	59.341	ENSAMXG00000034333	-	88	59.341
ENSAMXG00000042633	-	97	60.731	ENSAMXG00000042593	-	98	60.731
ENSAMXG00000042633	-	95	60.544	ENSAMXG00000036849	-	76	61.111
ENSAMXG00000042633	-	96	41.011	ENSAMXG00000033299	-	70	41.011
ENSAMXG00000042633	-	98	60.909	ENSAMXG00000040806	-	95	60.909
ENSAMXG00000042633	-	97	57.362	ENSAMXG00000037717	-	97	57.362
ENSAMXG00000042633	-	90	53.846	ENSAMXG00000038122	-	94	53.846
ENSAMXG00000042633	-	98	64.246	ENSAMXG00000034958	-	95	64.246
ENSAMXG00000042633	-	98	61.012	ENSAMXG00000033500	-	96	65.244
ENSAMXG00000042633	-	98	59.146	ENSAMXG00000017959	-	99	59.146
ENSAMXG00000042633	-	96	66.978	ENSAMXG00000025965	-	94	66.978
ENSAMXG00000042633	-	96	66.564	ENSAMXG00000036567	-	77	66.564
ENSAMXG00000042633	-	96	54.545	ENSAMXG00000030659	-	78	50.862
ENSAMXG00000042633	-	96	54.753	ENSAMXG00000042174	-	92	54.381
ENSAMXG00000042633	-	98	66.222	ENSAMXG00000041861	-	95	66.222
ENSAMXG00000042633	-	91	48.276	ENSAMXG00000041862	-	95	48.276
ENSAMXG00000042633	-	96	65.244	ENSAMXG00000041865	-	98	65.244
ENSAMXG00000042633	-	96	66.079	ENSAMXG00000031646	-	96	66.079
ENSAMXG00000042633	-	98	63.712	ENSAMXG00000043423	-	81	63.712
ENSAMXG00000042633	-	98	58.846	ENSAMXG00000044107	-	87	58.846
ENSAMXG00000042633	-	98	56.598	ENSAMXG00000035875	-	100	56.598
ENSAMXG00000042633	-	96	67.290	ENSAMXG00000041404	-	96	67.290
ENSAMXG00000042633	-	96	40.000	ENSAMXG00000037544	GFI1B	59	40.000
ENSAMXG00000042633	-	96	66.978	ENSAMXG00000037885	-	97	66.978
ENSAMXG00000042633	-	94	59.036	ENSAMXG00000042746	-	88	59.036
ENSAMXG00000042633	-	97	67.148	ENSAMXG00000017609	-	80	67.148
ENSAMXG00000042633	-	97	68.404	ENSAMXG00000030911	-	67	68.404
ENSAMXG00000042633	-	92	31.780	ENSAMXG00000002273	patz1	51	31.020
ENSAMXG00000042633	-	97	56.106	ENSAMXG00000013274	-	100	57.993
ENSAMXG00000042633	-	99	62.500	ENSAMXG00000037760	-	100	62.500
ENSAMXG00000042633	-	96	40.476	ENSAMXG00000006669	GFI1	68	40.476
ENSAMXG00000042633	-	97	63.898	ENSAMXG00000034847	-	89	63.898
ENSAMXG00000042633	-	94	65.870	ENSAMXG00000041975	-	86	65.870
ENSAMXG00000042633	-	98	61.963	ENSAMXG00000042938	-	87	61.963
ENSAMXG00000042633	-	96	69.748	ENSAMXG00000037703	-	86	69.748
ENSAMXG00000042633	-	96	59.259	ENSAMXG00000037709	-	86	59.259
ENSAMXG00000042633	-	95	56.400	ENSAMXG00000034096	-	87	56.400
ENSAMXG00000042633	-	90	68.263	ENSAMXG00000029878	-	91	68.263
ENSAMXG00000042633	-	98	37.690	ENSAMXG00000041864	prdm5	86	36.957
ENSAMXG00000042633	-	96	67.110	ENSAMXG00000041725	-	88	67.110
ENSAMXG00000042633	-	96	62.187	ENSAMXG00000029828	-	97	62.187
ENSAMXG00000042633	-	96	68.571	ENSAMXG00000031501	-	90	68.571
ENSAMXG00000042633	-	96	65.484	ENSAMXG00000010930	-	81	65.484
ENSAMXG00000042633	-	97	42.941	ENSAMXG00000017199	-	50	42.941
ENSAMXG00000042633	-	98	61.832	ENSAMXG00000029109	-	87	61.832
ENSAMXG00000042633	-	97	35.714	ENSAMXG00000034158	scrt2	55	35.714
ENSAMXG00000042633	-	97	62.687	ENSAMXG00000031489	-	92	63.415
ENSAMXG00000042633	-	98	64.336	ENSAMXG00000042167	-	98	64.336
ENSAMXG00000042633	-	95	42.857	ENSAMXG00000035246	-	76	42.857
ENSAMXG00000042633	-	96	63.423	ENSAMXG00000038453	-	89	63.423
ENSAMXG00000042633	-	99	58.824	ENSAMXG00000040677	-	89	56.233
ENSAMXG00000042633	-	96	45.062	ENSAMXG00000034934	-	89	45.062
ENSAMXG00000042633	-	96	66.667	ENSAMXG00000035920	-	89	66.667
ENSAMXG00000042633	-	90	49.412	ENSAMXG00000037382	-	87	42.056
ENSAMXG00000042633	-	98	64.894	ENSAMXG00000041721	-	78	64.894
ENSAMXG00000042633	-	97	36.905	ENSAMXG00000008771	PRDM15	52	32.031
ENSAMXG00000042633	-	97	57.490	ENSAMXG00000039408	-	97	60.000
ENSAMXG00000042633	-	97	61.837	ENSAMXG00000037326	-	96	61.837
ENSAMXG00000042633	-	98	56.250	ENSAMXG00000012873	-	93	57.422
ENSAMXG00000042633	-	96	59.140	ENSAMXG00000037143	-	95	59.140
ENSAMXG00000042633	-	97	64.286	ENSAMXG00000036233	-	83	64.286
ENSAMXG00000042633	-	91	55.310	ENSAMXG00000043302	-	72	55.310
ENSAMXG00000042633	-	95	59.401	ENSAMXG00000030530	-	99	62.460
ENSAMXG00000042633	-	96	68.293	ENSAMXG00000039879	-	97	68.293
ENSAMXG00000042633	-	99	60.000	ENSAMXG00000039700	-	98	60.000
ENSAMXG00000042633	-	98	58.101	ENSAMXG00000001626	-	99	58.101
ENSAMXG00000042633	-	89	61.413	ENSAMXG00000030963	-	65	61.413
ENSAMXG00000042633	-	96	65.109	ENSAMXG00000009558	-	93	65.109
ENSAMXG00000042633	-	97	58.055	ENSAMXG00000033201	-	98	60.121
ENSAMXG00000042633	-	97	67.073	ENSAMXG00000040212	-	88	67.073
ENSAMXG00000042633	-	96	58.453	ENSAMXG00000029960	-	96	58.453
ENSAMXG00000042633	-	93	42.969	ENSAMXG00000034873	-	81	42.969
ENSAMXG00000042633	-	96	65.421	ENSAMXG00000039162	-	95	65.421
ENSAMXG00000042633	-	97	56.383	ENSAMXG00000043541	-	80	60.215
ENSAMXG00000042633	-	92	40.411	ENSAMXG00000032845	-	61	35.751
ENSAMXG00000042633	-	95	66.768	ENSAMXG00000032457	-	91	66.768
ENSAMXG00000042633	-	95	61.364	ENSAMXG00000029161	-	80	61.364
ENSAMXG00000042633	-	98	58.896	ENSAMXG00000032212	-	84	58.896
ENSAMXG00000042633	-	99	59.159	ENSAMXG00000036241	-	89	59.159
ENSAMXG00000042633	-	96	66.124	ENSAMXG00000009776	-	96	66.124
ENSAMXG00000042633	-	98	61.350	ENSAMXG00000039752	-	96	61.350
ENSAMXG00000042633	-	98	62.176	ENSAMXG00000035683	-	99	62.176
ENSAMXG00000042633	-	90	66.792	ENSAMXG00000035949	-	75	66.792
ENSAMXG00000042633	-	96	66.450	ENSAMXG00000041128	-	88	66.450
ENSAMXG00000042633	-	97	59.756	ENSAMXG00000034402	-	94	59.756
ENSAMXG00000042633	-	97	66.978	ENSAMXG00000024978	-	97	66.978
ENSAMXG00000042633	-	98	47.541	ENSAMXG00000012589	-	88	47.541
ENSAMXG00000042633	-	94	40.278	ENSAMXG00000042191	zbtb47a	73	40.278
ENSAMXG00000042633	-	98	55.674	ENSAMXG00000029783	-	88	56.071
ENSAMXG00000042633	-	93	56.410	ENSAMXG00000019489	-	96	57.558
ENSAMXG00000042633	-	96	62.234	ENSAMXG00000038280	-	87	62.234
ENSAMXG00000042633	-	98	57.669	ENSAMXG00000038284	-	97	57.669
ENSAMXG00000042633	-	95	49.359	ENSAMXG00000007973	-	97	49.359
ENSAMXG00000042633	-	99	36.123	ENSAMXG00000029059	-	67	36.866
ENSAMXG00000042633	-	96	68.308	ENSAMXG00000031009	-	91	68.308
ENSAMXG00000042633	-	94	37.719	ENSAMXG00000024907	znf319b	86	37.500
ENSAMXG00000042633	-	96	60.061	ENSAMXG00000010805	-	96	60.061
ENSAMXG00000042633	-	98	61.564	ENSAMXG00000040630	-	99	62.681
ENSAMXG00000042633	-	92	41.228	ENSAMXG00000015228	-	68	41.228
ENSAMXG00000042633	-	96	61.009	ENSAMXG00000043291	-	69	61.009
ENSAMXG00000042633	-	92	59.756	ENSAMXG00000038324	-	78	59.756
ENSAMXG00000042633	-	95	55.418	ENSAMXG00000038325	-	96	55.418
ENSAMXG00000042633	-	99	60.472	ENSAMXG00000030742	-	99	60.472
ENSAMXG00000042633	-	97	53.846	ENSAMXG00000012604	-	96	54.683
ENSAMXG00000042633	-	95	68.371	ENSAMXG00000025455	-	98	68.371
ENSAMXG00000042633	-	97	62.040	ENSAMXG00000025452	-	99	62.040
ENSAMXG00000042633	-	98	62.080	ENSAMXG00000031794	-	99	63.333
ENSAMXG00000042633	-	90	37.264	ENSAMXG00000044034	-	57	37.264
ENSAMXG00000042633	-	96	48.198	ENSAMXG00000029660	-	57	48.198
ENSAMXG00000042633	-	96	70.323	ENSAMXG00000029178	-	98	70.323
ENSAMXG00000042633	-	96	65.644	ENSAMXG00000042774	-	94	65.644
ENSAMXG00000042633	-	96	67.683	ENSAMXG00000039744	-	99	67.683
ENSAMXG00000042633	-	95	65.300	ENSAMXG00000035690	-	74	65.300
ENSAMXG00000042633	-	95	60.494	ENSAMXG00000039770	-	84	60.494
ENSAMXG00000042633	-	96	61.963	ENSAMXG00000036915	-	93	61.963
ENSAMXG00000042633	-	96	69.027	ENSAMXG00000018161	-	95	69.027
ENSAMXG00000042633	-	97	64.807	ENSAMXG00000004610	-	98	64.807
ENSAMXG00000042633	-	96	67.692	ENSAMXG00000036762	-	97	67.692
ENSAMXG00000042633	-	96	65.015	ENSAMXG00000039004	-	88	65.015
ENSAMXG00000042633	-	96	60.664	ENSAMXG00000044028	-	95	60.664
ENSAMXG00000042633	-	95	61.628	ENSAMXG00000031307	-	67	61.628
ENSAMXG00000042633	-	93	40.136	ENSAMXG00000039622	zbtb41	52	40.136
ENSAMXG00000042633	-	94	59.036	ENSAMXG00000038536	-	88	59.036
ENSAMXG00000042633	-	97	45.417	ENSAMXG00000035127	-	92	48.819
ENSAMXG00000042633	-	99	49.057	ENSAMXG00000013492	-	96	48.084
ENSAMXG00000042633	-	97	68.153	ENSAMXG00000007092	-	99	68.153
ENSAMXG00000042633	-	88	32.973	ENSAMXG00000005882	znf131	52	33.161
ENSAMXG00000042633	-	91	42.286	ENSAMXG00000007441	-	58	42.286
ENSAMXG00000042633	-	97	64.821	ENSAMXG00000039432	-	99	64.821
ENSAMXG00000042633	-	97	63.277	ENSAMXG00000039977	-	95	64.662
ENSAMXG00000042633	-	97	58.912	ENSAMXG00000043978	-	88	58.912
ENSAMXG00000042633	-	98	58.879	ENSAMXG00000043019	-	92	58.879
ENSAMXG00000042633	-	97	54.333	ENSAMXG00000032237	-	99	57.186
ENSAMXG00000042633	-	97	35.606	ENSAMXG00000038085	scrt1a	54	35.606
ENSAMXG00000042633	-	96	62.443	ENSAMXG00000033013	-	82	62.443
ENSAMXG00000042633	-	99	54.875	ENSAMXG00000036633	-	68	54.696
ENSAMXG00000042633	-	90	65.723	ENSAMXG00000031900	-	95	65.723
ENSAMXG00000042633	-	98	62.388	ENSAMXG00000041609	-	99	62.388
ENSAMXG00000042633	-	99	64.808	ENSAMXG00000003002	-	93	64.808
ENSAMXG00000042633	-	99	50.904	ENSAMXG00000026143	-	100	56.250
ENSAMXG00000042633	-	98	63.582	ENSAMXG00000026142	-	95	63.582
ENSAMXG00000042633	-	99	53.719	ENSAMXG00000026144	-	94	54.397
ENSAMXG00000042633	-	90	58.605	ENSAMXG00000009563	-	99	59.756
ENSAMXG00000042633	-	90	66.977	ENSAMXG00000035145	-	64	66.977
ENSAMXG00000042633	-	97	60.065	ENSAMXG00000031496	-	91	60.065
ENSAMXG00000042633	-	97	67.988	ENSAMXG00000043251	-	96	67.988
ENSAMXG00000042633	-	99	43.200	ENSAMXG00000033252	-	99	43.200
ENSAMXG00000042633	-	97	65.147	ENSAMXG00000010078	-	90	65.147
ENSAMXG00000042633	-	97	60.101	ENSAMXG00000032841	-	85	60.101
ENSAMXG00000042633	-	98	37.537	ENSAMXG00000025761	-	86	36.141
ENSAMXG00000042633	-	97	64.024	ENSAMXG00000039016	-	83	64.024
ENSAMXG00000042633	-	98	59.509	ENSAMXG00000042275	-	96	59.509
ENSAMXG00000042633	-	96	70.648	ENSAMXG00000035809	-	99	70.648
ENSAMXG00000042633	-	96	68.121	ENSAMXG00000038636	-	98	68.121
ENSAMXG00000042633	-	96	57.983	ENSAMXG00000034344	-	78	57.983
ENSAMXG00000042633	-	97	68.121	ENSAMXG00000011804	-	86	68.121
ENSAMXG00000042633	-	96	59.184	ENSAMXG00000036257	-	88	59.184
ENSAMXG00000042633	-	98	33.540	ENSAMXG00000035525	znf646	89	33.540
ENSAMXG00000042633	-	92	60.209	ENSAMXG00000041650	-	96	60.209
ENSAMXG00000042633	-	97	61.890	ENSAMXG00000037923	-	99	61.890
ENSAMXG00000042633	-	97	61.194	ENSAMXG00000033124	-	65	61.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042633	-	91	48.246	ENSATEG00000010859	-	97	48.246	Anabas_testudineus
ENSAMXG00000042633	-	90	54.737	ENSCPBG00000009849	-	78	53.947	Chrysemys_picta_bellii
ENSAMXG00000042633	-	97	54.513	ENSELUG00000009575	-	99	53.412	Esox_lucius
ENSAMXG00000042633	-	97	54.636	ENSIPUG00000015121	-	60	54.603	Ictalurus_punctatus
ENSAMXG00000042633	-	96	42.373	ENSKMAG00000000543	-	99	43.598	Kryptolebias_marmoratus
ENSAMXG00000042633	-	95	41.530	ENSMAMG00000016519	-	94	41.530	Mastacembelus_armatus
ENSAMXG00000042633	-	97	46.341	ENSMZEG00005020574	-	87	46.341	Maylandia_zebra
ENSAMXG00000042633	-	97	40.514	ENSONIG00000007088	-	100	40.514	Oreochromis_niloticus
ENSAMXG00000042633	-	90	54.643	ENSPSIG00000000075	-	72	54.643	Pelodiscus_sinensis
ENSAMXG00000042633	-	97	62.278	ENSPNAG00000012215	-	93	62.278	Pygocentrus_nattereri
ENSAMXG00000042633	-	96	59.004	ENSPNAG00000008480	-	94	59.004	Pygocentrus_nattereri
ENSAMXG00000042633	-	92	40.789	ENSSMAG00000007396	-	81	40.113	Scophthalmus_maximus
ENSAMXG00000042633	-	90	56.122	ENSTBEG00000012287	-	99	56.122	Tupaia_belangeri