EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042718 (Gene tree)
Gene ID: 103027270
Gene Symbol: srsf2a
Alias: hm:zeh0252|sfrs2|srsf2|wu:fb51a05|wu:fk59b08|zgc:56283
Full Name: serine/arginine-rich splicing factor 2-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9165 bases
Position: chrAPWO02000780.1:137897-147061
Accession: 103027270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030712	RRM_1	PF00076.22	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039924	-	3283	XM_007241290	ENSAMXP00000030712	211 (aa)	XP_007241352	UPI000440C631

Gene Model

Click here to download ENSAMXG00000042718's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG
amex05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042718	srsf2a	99	65.385	ENSCHOG00000014019	-	52	92.523	Choloepus_hoffmanni
ENSAMXG00000042718	srsf2a	53	97.321	ENSDARG00000057484	srsf2a	91	97.196	Danio_rerio
ENSAMXG00000042718	srsf2a	95	51.000	ENSDNOG00000033905	-	53	66.000	Dasypus_novemcinctus
ENSAMXG00000042718	srsf2a	100	67.773	ENSGAFG00000005791	srsf2a	53	96.262	Gambusia_affinis
ENSAMXG00000042718	srsf2a	51	95.327	ENSGACG00000003105	srsf2a	54	95.327	Gasterosteus_aculeatus
ENSAMXG00000042718	srsf2a	63	74.242	ENSSTOG00000025265	-	52	97.872	Ictidomys_tridecemlineatus
ENSAMXG00000042718	srsf2a	53	97.321	ENSKMAG00000009464	srsf2a	67	78.571	Kryptolebias_marmoratus
ENSAMXG00000042718	srsf2a	53	97.321	ENSLOCG00000011252	srsf2a	50	98.131	Lepisosteus_oculatus
ENSAMXG00000042718	srsf2a	63	78.030	ENSMLEG00000025525	SRSF2	50	93.617	Mandrillus_leucophaeus
ENSAMXG00000042718	srsf2a	53	95.536	ENSMMOG00000020751	srsf2a	50	96.226	Mola_mola
ENSAMXG00000042718	srsf2a	70	51.351	ENSMLUG00000026613	-	52	60.748	Myotis_lucifugus
ENSAMXG00000042718	srsf2a	53	95.536	ENSOMEG00000007583	srsf2a	76	70.391	Oryzias_melastigma
ENSAMXG00000042718	srsf2a	50	60.360	ENSOGAG00000031672	-	51	60.360	Otolemur_garnettii
ENSAMXG00000042718	srsf2a	67	63.380	ENSOARG00000018667	-	51	73.529	Ovis_aries
ENSAMXG00000042718	srsf2a	67	63.380	ENSOARG00000018359	-	51	73.529	Ovis_aries
ENSAMXG00000042718	srsf2a	53	96.429	ENSPREG00000003658	srsf2a	77	71.823	Poecilia_reticulata
ENSAMXG00000042718	srsf2a	53	99.107	ENSSFOG00015003975	-	56	91.200	Scleropages_formosus
ENSAMXG00000042718	srsf2a	54	95.614	ENSSMAG00000005854	srsf2a	50	95.327	Scophthalmus_maximus
ENSAMXG00000042718	srsf2a	53	92.793	ENSSPUG00000007582	-	50	95.283	Sphenodon_punctatus
ENSAMXG00000042718	srsf2a	69	66.447	ENSSSCG00000012212	-	52	76.471	Sus_scrofa