EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042761 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3813 bases
Position: chrAPWO02000034.1:1232289-1236101
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040024	RVT_1	PF00078.27	4.5e-44	1	1
ENSAMXP00000040024	Exo_endo_phos	PF03372.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048093	-	3813	-	ENSAMXP00000040024	1270 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042761	-	81	40.428	ENSAMXG00000041150	-	98	40.428
ENSAMXG00000042761	-	66	36.773	ENSAMXG00000040121	-	99	36.773
ENSAMXG00000042761	-	79	34.118	ENSAMXG00000037218	-	99	34.118
ENSAMXG00000042761	-	64	39.708	ENSAMXG00000036752	-	99	39.708
ENSAMXG00000042761	-	99	33.150	ENSAMXG00000034221	-	99	33.150
ENSAMXG00000042761	-	99	31.978	ENSAMXG00000031230	-	99	31.978
ENSAMXG00000042761	-	97	33.820	ENSAMXG00000036146	-	97	33.820
ENSAMXG00000042761	-	79	49.062	ENSAMXG00000036080	-	89	49.062
ENSAMXG00000042761	-	97	32.235	ENSAMXG00000037256	-	97	32.235
ENSAMXG00000042761	-	68	43.779	ENSAMXG00000042337	-	98	43.779
ENSAMXG00000042761	-	65	33.612	ENSAMXG00000033587	-	99	33.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042761	-	94	35.554	ENSAOCG00000008973	-	82	35.554	Amphiprion_ocellaris
ENSAMXG00000042761	-	99	35.122	ENSAPEG00000012642	-	99	35.122	Amphiprion_percula
ENSAMXG00000042761	-	95	33.059	ENSACLG00000023850	-	95	33.059	Astatotilapia_calliptera
ENSAMXG00000042761	-	93	34.477	ENSACLG00000002748	-	99	34.477	Astatotilapia_calliptera
ENSAMXG00000042761	-	98	31.200	ENSACLG00000012298	-	99	31.201	Astatotilapia_calliptera
ENSAMXG00000042761	-	65	31.678	ENSACLG00000027045	-	99	31.678	Astatotilapia_calliptera
ENSAMXG00000042761	-	89	37.588	ENSACLG00000018177	-	99	37.588	Astatotilapia_calliptera
ENSAMXG00000042761	-	80	35.106	ENSACLG00000026023	-	95	35.106	Astatotilapia_calliptera
ENSAMXG00000042761	-	99	38.528	ENSACLG00000014673	-	99	38.766	Astatotilapia_calliptera
ENSAMXG00000042761	-	99	40.855	ENSKMAG00000007098	-	99	41.172	Kryptolebias_marmoratus
ENSAMXG00000042761	-	77	38.540	ENSKMAG00000006893	-	99	38.540	Kryptolebias_marmoratus
ENSAMXG00000042761	-	99	32.362	ENSKMAG00000020345	-	99	32.362	Kryptolebias_marmoratus
ENSAMXG00000042761	-	97	40.113	ENSKMAG00000002601	-	99	40.113	Kryptolebias_marmoratus
ENSAMXG00000042761	-	91	33.191	ENSKMAG00000006598	-	99	33.277	Kryptolebias_marmoratus
ENSAMXG00000042761	-	99	39.620	ENSKMAG00000013004	-	98	39.620	Kryptolebias_marmoratus
ENSAMXG00000042761	-	97	33.200	ENSKMAG00000014428	-	98	33.200	Kryptolebias_marmoratus
ENSAMXG00000042761	-	99	31.725	ENSKMAG00000018279	-	99	31.725	Kryptolebias_marmoratus
ENSAMXG00000042761	-	61	36.842	ENSLBEG00000017877	-	97	36.970	Labrus_bergylta
ENSAMXG00000042761	-	59	42.819	ENSMZEG00005013632	-	99	43.215	Maylandia_zebra
ENSAMXG00000042761	-	78	32.533	ENSMZEG00005001544	-	98	32.533	Maylandia_zebra
ENSAMXG00000042761	-	50	33.904	ENSONIG00000020880	-	94	33.904	Oreochromis_niloticus
ENSAMXG00000042761	-	71	32.159	ENSONIG00000020778	-	98	32.159	Oreochromis_niloticus
ENSAMXG00000042761	-	97	36.429	ENSORLG00000026691	-	99	36.429	Oryzias_latipes
ENSAMXG00000042761	-	97	36.429	ENSORLG00000025420	-	99	36.429	Oryzias_latipes
ENSAMXG00000042761	-	99	32.095	ENSORLG00000024310	-	99	32.095	Oryzias_latipes
ENSAMXG00000042761	-	97	36.111	ENSORLG00000029798	-	99	36.111	Oryzias_latipes
ENSAMXG00000042761	-	99	30.493	ENSORLG00000029419	-	99	30.493	Oryzias_latipes
ENSAMXG00000042761	-	61	37.783	ENSORLG00000023193	-	92	37.783	Oryzias_latipes
ENSAMXG00000042761	-	98	40.302	ENSORLG00020008142	-	98	40.302	Oryzias_latipes_hni
ENSAMXG00000042761	-	70	33.371	ENSORLG00020016539	-	99	33.371	Oryzias_latipes_hni
ENSAMXG00000042761	-	99	37.569	ENSORLG00020001169	-	99	37.569	Oryzias_latipes_hni
ENSAMXG00000042761	-	60	30.458	ENSORLG00020003581	-	93	30.719	Oryzias_latipes_hni
ENSAMXG00000042761	-	99	33.175	ENSORLG00020000561	-	99	33.175	Oryzias_latipes_hni
ENSAMXG00000042761	-	97	36.749	ENSORLG00020020951	-	98	36.749	Oryzias_latipes_hni
ENSAMXG00000042761	-	97	32.292	ENSORLG00015002592	-	96	32.157	Oryzias_latipes_hsok
ENSAMXG00000042761	-	99	33.333	ENSORLG00015013713	-	99	33.333	Oryzias_latipes_hsok
ENSAMXG00000042761	-	99	41.436	ENSORLG00015002129	-	98	41.436	Oryzias_latipes_hsok
ENSAMXG00000042761	-	62	31.960	ENSOMEG00000006131	-	99	31.960	Oryzias_melastigma
ENSAMXG00000042761	-	80	37.095	ENSOMEG00000021560	-	98	37.095	Oryzias_melastigma
ENSAMXG00000042761	-	75	37.434	ENSPFOG00000021895	-	97	37.434	Poecilia_formosa
ENSAMXG00000042761	-	95	31.669	ENSPREG00000005522	-	97	31.669	Poecilia_reticulata
ENSAMXG00000042761	-	98	35.036	ENSPREG00000018911	-	97	35.060	Poecilia_reticulata
ENSAMXG00000042761	-	71	38.546	ENSSLDG00000010601	-	85	38.546	Seriola_lalandi_dorsalis
ENSAMXG00000042761	-	79	43.939	ENSXETG00000034016	-	95	43.939	Xenopus_tropicalis
ENSAMXG00000042761	-	93	37.257	ENSXMAG00000027558	-	95	37.257	Xiphophorus_maculatus
ENSAMXG00000042761	-	67	32.295	ENSXMAG00000024492	-	99	32.295	Xiphophorus_maculatus
ENSAMXG00000042761	-	93	31.526	ENSXMAG00000028274	-	99	31.526	Xiphophorus_maculatus
ENSAMXG00000042761	-	66	32.189	ENSXMAG00000021762	-	95	32.189	Xiphophorus_maculatus
ENSAMXG00000042761	-	99	39.396	ENSXMAG00000027070	-	98	39.396	Xiphophorus_maculatus
ENSAMXG00000042761	-	66	38.129	ENSXMAG00000023805	-	99	38.129	Xiphophorus_maculatus