EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042777 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 2280 bases
Position: chrAPWO02000030.1:54782-57061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000035200	RVT_1	PF00078.27	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046957	-	2280	-	ENSAMXP00000035200	759 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042777	-	57	35.227	ENSAMXG00000038502	-	83	35.227
ENSAMXG00000042777	-	71	31.919	ENSAMXG00000040471	-	77	31.919
ENSAMXG00000042777	-	67	41.051	ENSAMXG00000030761	-	66	41.051
ENSAMXG00000042777	-	85	36.018	ENSAMXG00000043631	-	77	36.018
ENSAMXG00000042777	-	54	33.088	ENSAMXG00000039106	-	73	33.088
ENSAMXG00000042777	-	88	39.854	ENSAMXG00000040885	-	50	39.854
ENSAMXG00000042777	-	88	61.652	ENSAMXG00000041465	-	92	61.652
ENSAMXG00000042777	-	51	33.163	ENSAMXG00000031032	-	96	33.163
ENSAMXG00000042777	-	99	70.722	ENSAMXG00000039912	-	50	70.722
ENSAMXG00000042777	-	52	64.467	ENSAMXG00000043821	-	53	64.467
ENSAMXG00000042777	-	56	43.548	ENSAMXG00000038480	-	59	43.548
ENSAMXG00000042777	-	93	60.955	ENSAMXG00000030908	-	59	60.955
ENSAMXG00000042777	-	58	35.469	ENSAMXG00000037637	-	69	35.469
ENSAMXG00000042777	-	83	34.585	ENSAMXG00000037864	-	53	34.585
ENSAMXG00000042777	-	54	34.058	ENSAMXG00000035893	-	62	34.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042777	-	50	31.854	ENSAPOG00000008925	-	98	31.854	Acanthochromis_polyacanthus
ENSAMXG00000042777	-	94	62.325	ENSAPOG00000015320	-	64	62.325	Acanthochromis_polyacanthus
ENSAMXG00000042777	-	53	35.840	ENSAOCG00000003030	-	50	35.840	Amphiprion_ocellaris
ENSAMXG00000042777	-	63	43.125	ENSAPEG00000006765	-	73	43.125	Amphiprion_percula
ENSAMXG00000042777	-	66	41.235	ENSAPEG00000002572	-	51	41.235	Amphiprion_percula
ENSAMXG00000042777	-	60	32.397	ENSAPEG00000014949	-	63	32.397	Amphiprion_percula
ENSAMXG00000042777	-	59	34.061	ENSACLG00000001380	-	73	34.061	Astatotilapia_calliptera
ENSAMXG00000042777	-	91	60.000	ENSACLG00000005526	-	84	60.000	Astatotilapia_calliptera
ENSAMXG00000042777	-	86	34.384	ENSACLG00000005847	-	87	34.384	Astatotilapia_calliptera
ENSAMXG00000042777	-	57	36.891	ENSACLG00000020385	-	74	36.900	Astatotilapia_calliptera
ENSAMXG00000042777	-	82	37.031	ENSACLG00000014688	-	50	37.031	Astatotilapia_calliptera
ENSAMXG00000042777	-	64	38.683	ENSACLG00000012278	-	61	38.683	Astatotilapia_calliptera
ENSAMXG00000042777	-	51	30.827	ENSACLG00000007712	-	63	30.827	Astatotilapia_calliptera
ENSAMXG00000042777	-	65	35.341	ENSACLG00000014740	-	58	34.972	Astatotilapia_calliptera
ENSAMXG00000042777	-	53	35.135	ENSCPBG00000001119	-	82	35.135	Chrysemys_picta_bellii
ENSAMXG00000042777	-	70	32.022	ENSCPBG00000001369	-	89	32.022	Chrysemys_picta_bellii
ENSAMXG00000042777	-	60	30.870	ENSCING00000021231	-	52	30.870	Ciona_intestinalis
ENSAMXG00000042777	-	67	32.171	ENSCVAG00000019870	-	65	32.171	Cyprinodon_variegatus
ENSAMXG00000042777	-	67	33.268	ENSGAGG00000013650	-	85	33.268	Gopherus_agassizii
ENSAMXG00000042777	-	75	32.414	ENSGAGG00000007173	-	86	32.414	Gopherus_agassizii
ENSAMXG00000042777	-	61	32.833	ENSGAGG00000011063	-	89	32.833	Gopherus_agassizii
ENSAMXG00000042777	-	69	34.165	ENSGAGG00000002613	-	66	34.165	Gopherus_agassizii
ENSAMXG00000042777	-	58	33.333	ENSGAGG00000007552	-	62	33.333	Gopherus_agassizii
ENSAMXG00000042777	-	70	33.581	ENSGAGG00000022002	-	61	33.581	Gopherus_agassizii
ENSAMXG00000042777	-	52	33.333	ENSHBUG00000009088	-	100	33.333	Haplochromis_burtoni
ENSAMXG00000042777	-	57	34.932	ENSHCOG00000019997	-	73	34.932	Hippocampus_comes
ENSAMXG00000042777	-	59	31.648	ENSIPUG00000003645	-	87	31.648	Ictalurus_punctatus
ENSAMXG00000042777	-	51	34.021	ENSKMAG00000007574	-	70	34.021	Kryptolebias_marmoratus
ENSAMXG00000042777	-	51	32.564	ENSKMAG00000003188	-	51	32.564	Kryptolebias_marmoratus
ENSAMXG00000042777	-	65	32.600	ENSKMAG00000013568	-	59	32.600	Kryptolebias_marmoratus
ENSAMXG00000042777	-	52	31.726	ENSLBEG00000003912	-	94	31.726	Labrus_bergylta
ENSAMXG00000042777	-	56	64.706	ENSLACG00000006413	-	58	64.706	Latimeria_chalumnae
ENSAMXG00000042777	-	56	31.090	ENSLACG00000016441	-	55	31.090	Latimeria_chalumnae
ENSAMXG00000042777	-	55	43.230	ENSLACG00000008450	-	53	43.230	Latimeria_chalumnae
ENSAMXG00000042777	-	64	31.846	ENSLACG00000015201	-	79	31.846	Latimeria_chalumnae
ENSAMXG00000042777	-	61	32.759	ENSLACG00000003991	-	50	32.759	Latimeria_chalumnae
ENSAMXG00000042777	-	65	35.354	ENSLACG00000006151	-	59	35.354	Latimeria_chalumnae
ENSAMXG00000042777	-	93	53.194	ENSLACG00000005710	-	55	53.194	Latimeria_chalumnae
ENSAMXG00000042777	-	51	31.061	ENSLACG00000002169	-	58	31.061	Latimeria_chalumnae
ENSAMXG00000042777	-	54	34.550	ENSLACG00000009347	-	62	34.550	Latimeria_chalumnae
ENSAMXG00000042777	-	64	31.936	ENSMAMG00000019918	-	77	31.936	Mastacembelus_armatus
ENSAMXG00000042777	-	62	43.187	ENSMAMG00000016004	-	70	43.187	Mastacembelus_armatus
ENSAMXG00000042777	-	75	40.138	ENSMZEG00005023862	-	50	40.138	Maylandia_zebra
ENSAMXG00000042777	-	94	57.698	ENSMZEG00005025542	-	54	57.698	Maylandia_zebra
ENSAMXG00000042777	-	69	32.375	ENSMZEG00005024252	-	56	32.375	Maylandia_zebra
ENSAMXG00000042777	-	99	57.520	ENSMZEG00005004899	-	94	57.520	Maylandia_zebra
ENSAMXG00000042777	-	52	30.175	ENSMZEG00005023829	-	74	30.175	Maylandia_zebra
ENSAMXG00000042777	-	64	43.177	ENSMZEG00005017878	-	74	43.177	Maylandia_zebra
ENSAMXG00000042777	-	63	37.866	ENSMZEG00005008378	-	70	36.949	Maylandia_zebra
ENSAMXG00000042777	-	68	40.901	ENSORLG00000025397	-	51	40.901	Oryzias_latipes
ENSAMXG00000042777	-	58	31.011	ENSORLG00000027443	-	70	31.011	Oryzias_latipes
ENSAMXG00000042777	-	87	37.164	ENSORLG00000024878	-	66	37.164	Oryzias_latipes
ENSAMXG00000042777	-	99	64.021	ENSORLG00000028175	-	52	64.021	Oryzias_latipes
ENSAMXG00000042777	-	68	33.143	ENSORLG00000026235	-	51	33.143	Oryzias_latipes
ENSAMXG00000042777	-	60	31.681	ENSORLG00000027231	-	82	31.681	Oryzias_latipes
ENSAMXG00000042777	-	62	31.092	ENSORLG00000027869	-	96	31.092	Oryzias_latipes
ENSAMXG00000042777	-	62	35.608	ENSORLG00020001433	-	59	35.608	Oryzias_latipes_hni
ENSAMXG00000042777	-	52	34.663	ENSORLG00020016924	-	88	34.663	Oryzias_latipes_hni
ENSAMXG00000042777	-	53	35.784	ENSORLG00020016695	-	51	35.784	Oryzias_latipes_hni
ENSAMXG00000042777	-	59	34.437	ENSORLG00020019030	-	51	34.437	Oryzias_latipes_hni
ENSAMXG00000042777	-	55	31.075	ENSORLG00020012706	-	100	31.075	Oryzias_latipes_hni
ENSAMXG00000042777	-	85	37.500	ENSORLG00020016398	-	50	37.500	Oryzias_latipes_hni
ENSAMXG00000042777	-	63	30.785	ENSORLG00020002002	-	73	30.785	Oryzias_latipes_hni
ENSAMXG00000042777	-	83	36.493	ENSORLG00020007648	-	51	36.493	Oryzias_latipes_hni
ENSAMXG00000042777	-	56	31.034	ENSORLG00020000154	-	99	31.034	Oryzias_latipes_hni
ENSAMXG00000042777	-	60	30.704	ENSORLG00020009127	-	86	30.704	Oryzias_latipes_hni
ENSAMXG00000042777	-	60	32.553	ENSORLG00020009084	-	59	32.553	Oryzias_latipes_hni
ENSAMXG00000042777	-	68	32.762	ENSORLG00015013369	-	65	32.762	Oryzias_latipes_hsok
ENSAMXG00000042777	-	53	34.483	ENSORLG00015021822	-	99	34.483	Oryzias_latipes_hsok
ENSAMXG00000042777	-	63	33.333	ENSORLG00015008138	-	86	33.333	Oryzias_latipes_hsok
ENSAMXG00000042777	-	56	31.075	ENSORLG00015009803	-	82	31.075	Oryzias_latipes_hsok
ENSAMXG00000042777	-	52	34.834	ENSORLG00015022127	-	51	34.834	Oryzias_latipes_hsok
ENSAMXG00000042777	-	57	40.596	ENSORLG00015000379	-	53	40.596	Oryzias_latipes_hsok
ENSAMXG00000042777	-	60	31.702	ENSORLG00015022314	-	51	31.702	Oryzias_latipes_hsok
ENSAMXG00000042777	-	93	33.884	ENSORLG00015017494	-	56	33.884	Oryzias_latipes_hsok
ENSAMXG00000042777	-	56	35.363	ENSORLG00015013109	-	64	35.363	Oryzias_latipes_hsok
ENSAMXG00000042777	-	82	36.624	ENSORLG00015012565	-	55	36.624	Oryzias_latipes_hsok
ENSAMXG00000042777	-	53	32.010	ENSOMEG00000013437	-	64	32.010	Oryzias_melastigma
ENSAMXG00000042777	-	79	37.993	ENSOMEG00000000573	-	51	37.993	Oryzias_melastigma
ENSAMXG00000042777	-	56	37.471	ENSOMEG00000013479	-	65	37.471	Oryzias_melastigma
ENSAMXG00000042777	-	69	33.706	ENSOMEG00000005634	-	69	33.706	Oryzias_melastigma
ENSAMXG00000042777	-	60	31.681	ENSPKIG00000015048	-	62	31.681	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	57	33.871	ENSPKIG00000007140	-	92	33.871	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	52	42.092	ENSPKIG00000003982	-	78	42.092	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	96	70.386	ENSPKIG00000012188	-	53	70.386	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	67	30.989	ENSPKIG00000013778	-	66	30.989	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	58	30.310	ENSPKIG00000005406	-	70	30.310	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	59	38.312	ENSPKIG00000012990	-	66	38.961	Paramormyrops_kingsleyae
ENSAMXG00000042777	-	56	35.047	ENSPSIG00000001800	-	88	35.047	Pelodiscus_sinensis
ENSAMXG00000042777	-	56	37.736	ENSPSIG00000001197	-	97	37.736	Pelodiscus_sinensis
ENSAMXG00000042777	-	63	43.182	ENSPSIG00000000226	-	90	42.105	Pelodiscus_sinensis
ENSAMXG00000042777	-	64	33.402	ENSPSIG00000001614	-	66	33.402	Pelodiscus_sinensis
ENSAMXG00000042777	-	58	32.045	ENSPSIG00000000367	-	93	32.045	Pelodiscus_sinensis
ENSAMXG00000042777	-	56	37.237	ENSPSIG00000000193	-	79	37.237	Pelodiscus_sinensis
ENSAMXG00000042777	-	52	34.080	ENSPSIG00000000007	-	93	34.080	Pelodiscus_sinensis
ENSAMXG00000042777	-	57	32.488	ENSPSIG00000001757	-	99	32.488	Pelodiscus_sinensis
ENSAMXG00000042777	-	67	30.333	ENSPSIG00000001150	-	64	30.528	Pelodiscus_sinensis
ENSAMXG00000042777	-	60	34.565	ENSPSIG00000001205	-	92	34.565	Pelodiscus_sinensis
ENSAMXG00000042777	-	57	34.247	ENSPMEG00000018862	-	82	34.247	Poecilia_mexicana
ENSAMXG00000042777	-	59	31.004	ENSPMEG00000017235	-	70	31.004	Poecilia_mexicana
ENSAMXG00000042777	-	53	42.506	ENSPREG00000006496	-	53	42.506	Poecilia_reticulata
ENSAMXG00000042777	-	56	38.118	ENSPREG00000006122	-	52	38.118	Poecilia_reticulata
ENSAMXG00000042777	-	75	38.632	ENSPNAG00000015770	-	54	35.219	Pygocentrus_nattereri
ENSAMXG00000042777	-	54	33.333	ENSPNAG00000009058	-	77	33.333	Pygocentrus_nattereri
ENSAMXG00000042777	-	52	30.923	ENSPNAG00000015949	-	96	30.923	Pygocentrus_nattereri
ENSAMXG00000042777	-	83	36.207	ENSPNAG00000009767	-	61	36.207	Pygocentrus_nattereri
ENSAMXG00000042777	-	58	30.889	ENSPNAG00000010299	-	82	30.889	Pygocentrus_nattereri
ENSAMXG00000042777	-	66	40.571	ENSSFOG00015024061	-	83	40.571	Scleropages_formosus
ENSAMXG00000042777	-	53	32.039	ENSSPAG00000008169	-	61	32.039	Stegastes_partitus
ENSAMXG00000042777	-	58	30.700	ENSTRUG00000024803	-	79	30.700	Takifugu_rubripes
ENSAMXG00000042777	-	98	57.238	ENSXMAG00000022790	-	50	57.238	Xiphophorus_maculatus
ENSAMXG00000042777	-	98	60.561	ENSXMAG00000025715	-	50	60.561	Xiphophorus_maculatus
ENSAMXG00000042777	-	85	38.897	ENSXMAG00000029360	-	64	38.897	Xiphophorus_maculatus
ENSAMXG00000042777	-	98	57.238	ENSXMAG00000023476	-	50	57.238	Xiphophorus_maculatus
ENSAMXG00000042777	-	85	38.822	ENSXMAG00000024180	-	63	38.822	Xiphophorus_maculatus
ENSAMXG00000042777	-	54	33.735	ENSXMAG00000025957	-	66	33.735	Xiphophorus_maculatus