EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042811 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6986 bases
Position: chrAPWO02000712.1:195631-202616
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041980	RVT_1	PF00078.27	5.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034560	-	3510	-	ENSAMXP00000041980	1169 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000042811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042811	-	69	40.392	ENSACIG00000007038	-	71	40.392	Amphilophus_citrinellus
ENSAMXG00000042811	-	71	41.423	ENSACIG00000010787	-	82	41.423	Amphilophus_citrinellus
ENSAMXG00000042811	-	70	40.241	ENSACIG00000009025	-	93	40.241	Amphilophus_citrinellus
ENSAMXG00000042811	-	70	40.049	ENSACIG00000013116	-	80	40.049	Amphilophus_citrinellus
ENSAMXG00000042811	-	77	35.591	ENSACIG00000012161	-	81	35.591	Amphilophus_citrinellus
ENSAMXG00000042811	-	91	44.356	ENSCPBG00000003842	-	84	44.021	Chrysemys_picta_bellii
ENSAMXG00000042811	-	91	33.985	ENSCVAG00000004138	-	96	33.985	Cyprinodon_variegatus
ENSAMXG00000042811	-	70	47.768	ENSELUG00000004597	-	84	48.130	Esox_lucius
ENSAMXG00000042811	-	84	45.201	ENSELUG00000004618	-	73	45.566	Esox_lucius
ENSAMXG00000042811	-	83	34.831	ENSFHEG00000007211	-	76	38.647	Fundulus_heteroclitus
ENSAMXG00000042811	-	89	31.185	ENSFHEG00000002865	-	67	34.658	Fundulus_heteroclitus
ENSAMXG00000042811	-	81	38.444	ENSFHEG00000022106	-	84	39.356	Fundulus_heteroclitus
ENSAMXG00000042811	-	70	36.965	ENSFHEG00000002853	-	76	36.965	Fundulus_heteroclitus
ENSAMXG00000042811	-	50	41.087	ENSGMOG00000005227	-	99	41.087	Gadus_morhua
ENSAMXG00000042811	-	94	39.440	ENSHCOG00000007397	-	95	39.531	Hippocampus_comes
ENSAMXG00000042811	-	83	57.143	ENSHCOG00000007436	-	94	57.143	Hippocampus_comes
ENSAMXG00000042811	-	92	39.964	ENSHCOG00000000471	-	91	39.964	Hippocampus_comes
ENSAMXG00000042811	-	83	45.854	ENSHCOG00000007389	-	87	45.854	Hippocampus_comes
ENSAMXG00000042811	-	63	38.996	ENSLBEG00000006732	-	94	38.996	Labrus_bergylta
ENSAMXG00000042811	-	61	40.941	ENSLBEG00000003745	-	92	39.015	Labrus_bergylta
ENSAMXG00000042811	-	59	39.773	ENSLBEG00000004576	-	79	40.831	Labrus_bergylta
ENSAMXG00000042811	-	50	39.226	ENSLACG00000009240	-	100	39.226	Latimeria_chalumnae
ENSAMXG00000042811	-	67	38.726	ENSLACG00000006357	-	97	38.726	Latimeria_chalumnae
ENSAMXG00000042811	-	90	42.342	ENSLOCG00000011928	-	99	41.328	Lepisosteus_oculatus
ENSAMXG00000042811	-	92	43.455	ENSLOCG00000017064	-	98	43.455	Lepisosteus_oculatus
ENSAMXG00000042811	-	91	37.693	ENSMAMG00000019985	-	90	37.421	Mastacembelus_armatus
ENSAMXG00000042811	-	91	35.348	ENSONIG00000020875	-	71	41.035	Oreochromis_niloticus
ENSAMXG00000042811	-	69	36.453	ENSOMEG00000015368	-	75	36.453	Oryzias_melastigma
ENSAMXG00000042811	-	66	38.138	ENSPMGG00000017392	-	83	38.138	Periophthalmus_magnuspinnatus
ENSAMXG00000042811	-	65	38.523	ENSPMGG00000001593	-	73	38.523	Periophthalmus_magnuspinnatus
ENSAMXG00000042811	-	78	40.025	ENSPLAG00000022994	-	86	40.025	Poecilia_latipinna
ENSAMXG00000042811	-	69	36.790	ENSPLAG00000011817	-	80	36.914	Poecilia_latipinna
ENSAMXG00000042811	-	77	40.327	ENSPLAG00000011810	-	84	40.327	Poecilia_latipinna
ENSAMXG00000042811	-	69	39.039	ENSPLAG00000023379	-	97	39.039	Poecilia_latipinna
ENSAMXG00000042811	-	69	38.148	ENSPMEG00000003431	-	77	38.395	Poecilia_mexicana
ENSAMXG00000042811	-	78	36.059	ENSPMEG00000008574	-	74	36.059	Poecilia_mexicana
ENSAMXG00000042811	-	80	38.584	ENSPREG00000005456	-	80	38.584	Poecilia_reticulata
ENSAMXG00000042811	-	70	37.500	ENSPREG00000005756	-	74	37.500	Poecilia_reticulata
ENSAMXG00000042811	-	70	39.435	ENSPREG00000012484	-	72	39.435	Poecilia_reticulata
ENSAMXG00000042811	-	70	48.649	ENSPNAG00000017596	-	83	48.649	Pygocentrus_nattereri
ENSAMXG00000042811	-	93	43.360	ENSPNAG00000016635	-	90	43.858	Pygocentrus_nattereri
ENSAMXG00000042811	-	95	36.628	ENSPNAG00000014625	-	90	37.169	Pygocentrus_nattereri
ENSAMXG00000042811	-	94	42.694	ENSPNAG00000003539	-	90	43.139	Pygocentrus_nattereri
ENSAMXG00000042811	-	92	44.062	ENSPNAG00000021754	-	89	44.725	Pygocentrus_nattereri
ENSAMXG00000042811	-	94	43.463	ENSPNAG00000007038	-	91	44.134	Pygocentrus_nattereri
ENSAMXG00000042811	-	91	46.555	ENSXCOG00000013093	-	92	46.555	Xiphophorus_couchianus
ENSAMXG00000042811	-	69	38.329	ENSXCOG00000008881	-	91	38.329	Xiphophorus_couchianus
ENSAMXG00000042811	-	69	36.978	ENSXMAG00000028672	-	74	36.978	Xiphophorus_maculatus