EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000042831 (Gene tree)
Gene ID: 103033276
Gene Symbol: -
Alias: -
Full Name: zinc finger C3H1-type containing
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 53061 bases
Position: chrAPWO02000387.1:236234-289294
Accession: 103033276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030517	zf-C3H1	PF10650.9	1.2e-07	1	1
ENSAMXP00000051519	zf-C3H1	PF10650.9	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000051177	-	8290	-	ENSAMXP00000030517	1900 (aa)	-	-
ENSAMXT00000040037	-	8190	XM_022685833	ENSAMXP00000051519	1933 (aa)	XP_022541554	UPI000BBD4E54

Gene Model

Click here to download ENSAMXG00000042831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042831's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042831	-	96	46.324	ENSG00000133858	ZFC3H1	95	45.382	Homo_sapiens
ENSAMXG00000042831	-	97	45.376	ENSAMEG00000000498	ZFC3H1	94	45.496	Ailuropoda_melanoleuca
ENSAMXG00000042831	-	93	48.913	ENSACIG00000015672	ZFC3H1	87	60.000	Amphilophus_citrinellus
ENSAMXG00000042831	-	84	52.874	ENSAOCG00000022567	ZFC3H1	94	50.684	Amphiprion_ocellaris
ENSAMXG00000042831	-	97	52.278	ENSATEG00000015391	ZFC3H1	94	52.152	Anabas_testudineus
ENSAMXG00000042831	-	93	47.941	ENSAPLG00000016116	ZFC3H1	99	48.000	Anas_platyrhynchos
ENSAMXG00000042831	-	97	48.116	ENSACAG00000007327	ZFC3H1	94	47.403	Anolis_carolinensis
ENSAMXG00000042831	-	96	45.566	ENSANAG00000038329	ZFC3H1	95	45.205	Aotus_nancymaae
ENSAMXG00000042831	-	84	51.513	ENSACLG00000021274	ZFC3H1	94	50.907	Astatotilapia_calliptera
ENSAMXG00000042831	-	97	45.867	ENSBTAG00000012267	ZFC3H1	94	45.290	Bos_taurus
ENSAMXG00000042831	-	96	46.048	ENSCJAG00000001384	ZFC3H1	95	45.500	Callithrix_jacchus
ENSAMXG00000042831	-	97	45.386	ENSCAFG00000000453	ZFC3H1	94	45.450	Canis_familiaris
ENSAMXG00000042831	-	97	45.386	ENSCAFG00020016502	ZFC3H1	94	45.450	Canis_lupus_dingo
ENSAMXG00000042831	-	97	46.134	ENSCHIG00000020097	ZFC3H1	94	45.381	Capra_hircus
ENSAMXG00000042831	-	96	46.126	ENSTSYG00000005471	ZFC3H1	94	45.629	Carlito_syrichta
ENSAMXG00000042831	-	96	44.062	ENSCPOG00000009504	ZFC3H1	94	44.016	Cavia_porcellus
ENSAMXG00000042831	-	96	46.048	ENSCCAG00000035967	ZFC3H1	95	45.350	Cebus_capucinus
ENSAMXG00000042831	-	96	46.221	ENSCATG00000016321	ZFC3H1	95	45.282	Cercocebus_atys
ENSAMXG00000042831	-	96	45.867	ENSCLAG00000007646	ZFC3H1	94	45.994	Chinchilla_lanigera
ENSAMXG00000042831	-	96	45.589	ENSCSAG00000004100	ZFC3H1	95	45.332	Chlorocebus_sabaeus
ENSAMXG00000042831	-	97	49.095	ENSCPBG00000013449	ZFC3H1	93	47.510	Chrysemys_picta_bellii
ENSAMXG00000042831	-	96	46.375	ENSCANG00000030229	ZFC3H1	95	45.432	Colobus_angolensis_palliatus
ENSAMXG00000042831	-	97	44.371	ENSCGRG00001011660	Zfc3h1	94	43.700	Cricetulus_griseus_chok1gshd
ENSAMXG00000042831	-	94	46.060	ENSCGRG00000006894	Zfc3h1	99	45.825	Cricetulus_griseus_crigri
ENSAMXG00000042831	-	90	42.600	ENSCSEG00000021462	ZFC3H1	98	42.847	Cynoglossus_semilaevis
ENSAMXG00000042831	-	97	49.419	ENSCVAG00000019629	-	99	48.130	Cyprinodon_variegatus
ENSAMXG00000042831	-	96	46.649	ENSDNOG00000010314	ZFC3H1	94	46.037	Dasypus_novemcinctus
ENSAMXG00000042831	-	93	40.835	ENSEBUG00000003491	-	91	40.843	Eptatretus_burgeri
ENSAMXG00000042831	-	98	45.570	ENSEASG00005008229	ZFC3H1	94	45.850	Equus_asinus_asinus
ENSAMXG00000042831	-	98	45.583	ENSECAG00000026833	ZFC3H1	99	44.804	Equus_caballus
ENSAMXG00000042831	-	99	50.583	ENSELUG00000013421	-	99	51.167	Esox_lucius
ENSAMXG00000042831	-	97	45.217	ENSFCAG00000024198	ZFC3H1	94	45.947	Felis_catus
ENSAMXG00000042831	-	97	47.116	ENSFALG00000010320	ZFC3H1	93	47.425	Ficedula_albicollis
ENSAMXG00000042831	-	96	46.071	ENSFDAG00000017503	ZFC3H1	94	45.693	Fukomys_damarensis
ENSAMXG00000042831	-	87	53.390	ENSGMOG00000004527	-	97	52.391	Gadus_morhua
ENSAMXG00000042831	-	94	49.537	ENSGALG00000010177	ZFC3H1	99	45.692	Gallus_gallus
ENSAMXG00000042831	-	69	51.369	ENSGAFG00000013283	-	99	51.564	Gambusia_affinis
ENSAMXG00000042831	-	97	50.488	ENSGACG00000007651	ZFC3H1	94	51.233	Gasterosteus_aculeatus
ENSAMXG00000042831	-	97	48.685	ENSGAGG00000013798	ZFC3H1	99	47.237	Gopherus_agassizii
ENSAMXG00000042831	-	99	44.961	ENSGGOG00000025994	ZFC3H1	95	45.482	Gorilla_gorilla
ENSAMXG00000042831	-	96	46.150	ENSHGLG00000014297	ZFC3H1	94	45.869	Heterocephalus_glaber_female
ENSAMXG00000042831	-	96	46.095	ENSHGLG00100006263	ZFC3H1	94	45.565	Heterocephalus_glaber_male
ENSAMXG00000042831	-	50	57.143	ENSHCOG00000009144	-	63	70.874	Hippocampus_comes
ENSAMXG00000042831	-	96	45.418	ENSSTOG00000002650	ZFC3H1	94	45.698	Ictidomys_tridecemlineatus
ENSAMXG00000042831	-	96	50.991	ENSKMAG00000021476	-	94	50.991	Kryptolebias_marmoratus
ENSAMXG00000042831	-	80	52.529	ENSLBEG00000012352	-	86	57.407	Labrus_bergylta
ENSAMXG00000042831	-	91	51.414	ENSLACG00000002585	ZFC3H1	99	46.657	Latimeria_chalumnae
ENSAMXG00000042831	-	99	52.752	ENSLOCG00000016238	ZFC3H1	99	51.963	Lepisosteus_oculatus
ENSAMXG00000042831	-	96	45.000	ENSLAFG00000005820	ZFC3H1	99	47.488	Loxodonta_africana
ENSAMXG00000042831	-	96	46.221	ENSMFAG00000039403	ZFC3H1	95	45.282	Macaca_fascicularis
ENSAMXG00000042831	-	96	46.221	ENSMMUG00000020943	ZFC3H1	95	45.282	Macaca_mulatta
ENSAMXG00000042831	-	96	46.170	ENSMNEG00000008807	ZFC3H1	95	45.232	Macaca_nemestrina
ENSAMXG00000042831	-	96	46.170	ENSMLEG00000029967	ZFC3H1	95	45.282	Mandrillus_leucophaeus
ENSAMXG00000042831	-	97	51.917	ENSMAMG00000021320	ZFC3H1	91	51.841	Mastacembelus_armatus
ENSAMXG00000042831	-	91	50.072	ENSMGAG00000010716	ZFC3H1	99	48.226	Meleagris_gallopavo
ENSAMXG00000042831	-	96	45.381	ENSMICG00000009137	ZFC3H1	94	45.163	Microcebus_murinus
ENSAMXG00000042831	-	97	47.032	ENSMODG00000020408	ZFC3H1	93	47.631	Monodelphis_domestica
ENSAMXG00000042831	-	98	46.119	MGP_CAROLIEiJ_G0015814	Zfc3h1	95	45.935	Mus_caroli
ENSAMXG00000042831	-	98	46.285	ENSMUSG00000034163	Zfc3h1	95	46.300	Mus_musculus
ENSAMXG00000042831	-	95	46.658	MGP_PahariEiJ_G0031273	Zfc3h1	95	45.092	Mus_pahari
ENSAMXG00000042831	-	98	46.242	MGP_SPRETEiJ_G0016636	Zfc3h1	95	46.257	Mus_spretus
ENSAMXG00000042831	-	97	45.496	ENSMPUG00000017488	ZFC3H1	94	45.800	Mustela_putorius_furo
ENSAMXG00000042831	-	97	44.758	ENSMLUG00000011723	ZFC3H1	93	45.215	Myotis_lucifugus
ENSAMXG00000042831	-	97	45.697	ENSNGAG00000017623	Zfc3h1	94	45.473	Nannospalax_galili
ENSAMXG00000042831	-	96	46.067	ENSNLEG00000004372	ZFC3H1	95	45.132	Nomascus_leucogenys
ENSAMXG00000042831	-	72	51.417	ENSOPRG00000008075	ZFC3H1	70	48.988	Ochotona_princeps
ENSAMXG00000042831	-	54	51.220	ENSONIG00000018271	ZFC3H1	99	51.782	Oreochromis_niloticus
ENSAMXG00000042831	-	96	46.221	ENSOCUG00000004591	ZFC3H1	95	45.756	Oryctolagus_cuniculus
ENSAMXG00000042831	-	93	50.181	ENSORLG00000000155	-	90	50.175	Oryzias_latipes
ENSAMXG00000042831	-	93	50.211	ENSORLG00015020699	-	90	50.407	Oryzias_latipes_hsok
ENSAMXG00000042831	-	93	49.337	ENSOMEG00000015403	-	88	50.087	Oryzias_melastigma
ENSAMXG00000042831	-	97	45.491	ENSOGAG00000033606	ZFC3H1	94	45.272	Otolemur_garnettii
ENSAMXG00000042831	-	97	45.867	ENSOARG00000014589	ZFC3H1	99	44.258	Ovis_aries
ENSAMXG00000042831	-	96	46.375	ENSPPAG00000029409	ZFC3H1	95	45.432	Pan_paniscus
ENSAMXG00000042831	-	97	45.217	ENSPPRG00000010196	ZFC3H1	94	45.947	Panthera_pardus
ENSAMXG00000042831	-	97	45.166	ENSPTIG00000006898	ZFC3H1	94	45.897	Panthera_tigris_altaica
ENSAMXG00000042831	-	96	46.375	ENSPTRG00000005224	ZFC3H1	95	45.432	Pan_troglodytes
ENSAMXG00000042831	-	96	45.450	ENSPANG00000009558	ZFC3H1	95	44.478	Papio_anubis
ENSAMXG00000042831	-	99	54.807	ENSPKIG00000023219	ZFC3H1	99	54.323	Paramormyrops_kingsleyae
ENSAMXG00000042831	-	97	48.585	ENSPSIG00000012997	ZFC3H1	99	50.118	Pelodiscus_sinensis
ENSAMXG00000042831	-	88	52.212	ENSPMGG00000007504	ZFC3H1	99	48.015	Periophthalmus_magnuspinnatus
ENSAMXG00000042831	-	97	46.495	ENSPCIG00000025066	ZFC3H1	93	47.713	Phascolarctos_cinereus
ENSAMXG00000042831	-	84	50.058	ENSPFOG00000001903	-	99	47.450	Poecilia_formosa
ENSAMXG00000042831	-	70	50.602	ENSPLAG00000015995	-	99	47.331	Poecilia_latipinna
ENSAMXG00000042831	-	87	46.176	ENSPMEG00000007517	-	99	47.047	Poecilia_mexicana
ENSAMXG00000042831	-	97	48.554	ENSPREG00000016974	ZFC3H1	99	47.901	Poecilia_reticulata
ENSAMXG00000042831	-	96	46.324	ENSPPYG00000004773	ZFC3H1	95	45.382	Pongo_abelii
ENSAMXG00000042831	-	83	44.313	ENSPCAG00000003723	ZFC3H1	84	43.328	Procavia_capensis
ENSAMXG00000042831	-	96	45.279	ENSPCOG00000019879	ZFC3H1	94	45.148	Propithecus_coquereli
ENSAMXG00000042831	-	92	46.774	ENSPVAG00000012354	ZFC3H1	90	45.468	Pteropus_vampyrus
ENSAMXG00000042831	-	84	51.658	ENSPNYG00000005977	ZFC3H1	94	50.944	Pundamilia_nyererei
ENSAMXG00000042831	-	96	68.665	ENSPNAG00000017704	-	99	81.897	Pygocentrus_nattereri
ENSAMXG00000042831	-	91	42.437	ENSRNOG00000053060	Zfc3h1	93	41.802	Rattus_norvegicus
ENSAMXG00000042831	-	96	45.023	ENSRBIG00000028462	ZFC3H1	95	44.328	Rhinopithecus_bieti
ENSAMXG00000042831	-	96	46.478	ENSRROG00000040039	ZFC3H1	95	45.532	Rhinopithecus_roxellana
ENSAMXG00000042831	-	96	46.643	ENSSBOG00000032676	ZFC3H1	95	45.637	Saimiri_boliviensis_boliviensis
ENSAMXG00000042831	-	99	46.582	ENSSHAG00000002431	ZFC3H1	99	47.143	Sarcophilus_harrisii
ENSAMXG00000042831	-	99	54.696	ENSSFOG00015018112	ZFC3H1	99	55.612	Scleropages_formosus
ENSAMXG00000042831	-	84	51.478	ENSSMAG00000019783	ZFC3H1	95	50.297	Scophthalmus_maximus
ENSAMXG00000042831	-	97	51.495	ENSSDUG00000000244	ZFC3H1	94	52.016	Seriola_dumerili
ENSAMXG00000042831	-	85	52.381	ENSSLDG00000018408	ZFC3H1	90	51.849	Seriola_lalandi_dorsalis
ENSAMXG00000042831	-	81	50.307	ENSSARG00000008639	ZFC3H1	81	51.247	Sorex_araneus
ENSAMXG00000042831	-	82	49.403	ENSSPAG00000001916	-	91	48.174	Stegastes_partitus
ENSAMXG00000042831	-	97	45.051	ENSSSCG00000000509	ZFC3H1	94	45.510	Sus_scrofa
ENSAMXG00000042831	-	97	46.429	ENSTGUG00000007206	ZFC3H1	94	47.249	Taeniopygia_guttata
ENSAMXG00000042831	-	65	49.925	ENSTRUG00000004528	-	97	49.963	Takifugu_rubripes
ENSAMXG00000042831	-	75	50.841	ENSTBEG00000016441	ZFC3H1	73	50.120	Tupaia_belangeri
ENSAMXG00000042831	-	97	44.230	ENSTTRG00000007328	ZFC3H1	94	44.428	Tursiops_truncatus
ENSAMXG00000042831	-	97	45.422	ENSUAMG00000001880	ZFC3H1	94	45.833	Ursus_americanus
ENSAMXG00000042831	-	99	44.236	ENSUMAG00000021131	ZFC3H1	94	45.713	Ursus_maritimus
ENSAMXG00000042831	-	94	45.871	ENSVVUG00000008655	ZFC3H1	99	46.199	Vulpes_vulpes
ENSAMXG00000042831	-	97	45.248	ENSXETG00000033302	ZFC3H1	98	44.901	Xenopus_tropicalis
ENSAMXG00000042831	-	84	50.654	ENSXMAG00000006933	-	99	47.281	Xiphophorus_maculatus