EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000042841 (Gene tree)
Gene ID
103045208
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
146260 bases
Position
chr23:1626812-1773071
Accession
103045208
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000045571Fox-1_CPF12414.88.2e-4111
ENSAMXP00000030277Fox-1_CPF12414.81.1e-4011
ENSAMXP00000045571RRM_1PF00076.221.6e-1811
ENSAMXP00000030277RRM_1PF00076.221.9e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000031863-1050XM_022682910ENSAMXP00000045571349 (aa)XP_022538631-
ENSAMXT00000046637-1197-ENSAMXP00000030277398 (aa)--
Gene Model
Click here to download ENSAMXG00000042841's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042841's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000042841rbfox3b6274.449ENSAMXG00000010470rbfox1l8558.055
ENSAMXG00000042841rbfox3b8156.230ENSAMXG00000011451rbfox29551.639
ENSAMXG00000042841rbfox3b7164.143ENSAMXG00000002431rbfox17264.542
ENSAMXG00000042841rbfox3b10076.111ENSAMXG00000037246rbfox3a9879.331
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000042841rbfox3b8574.000ENSG00000167281RBFOX310076.825Homo_sapiens
ENSAMXG00000042841rbfox3b10086.441ENSAPOG00000021630rbfox3b9787.006Acanthochromis_polyacanthus
ENSAMXG00000042841rbfox3b10064.804ENSAPOG00000015658-8866.102Acanthochromis_polyacanthus
ENSAMXG00000042841rbfox3b9369.855ENSAMEG00000014170RBFOX38971.751Ailuropoda_melanoleuca
ENSAMXG00000042841rbfox3b8982.748ENSACIG00000010817rbfox3b9983.387Amphilophus_citrinellus
ENSAMXG00000042841rbfox3b8867.584ENSACIG00000003768-9068.502Amphilophus_citrinellus
ENSAMXG00000042841rbfox3b10075.281ENSAOCG00000010786-9476.124Amphiprion_ocellaris
ENSAMXG00000042841rbfox3b10086.441ENSAOCG00000012358rbfox3b9787.006Amphiprion_ocellaris
ENSAMXG00000042841rbfox3b10077.401ENSAPEG00000019081rbfox3b9677.401Amphiprion_percula
ENSAMXG00000042841rbfox3b9568.392ENSAPEG00000015891-9069.399Amphiprion_percula
ENSAMXG00000042841rbfox3b8976.968ENSATEG00000019945rbfox3b9978.717Anabas_testudineus
ENSAMXG00000042841rbfox3b8578.073ENSATEG00000023101-9677.848Anabas_testudineus
ENSAMXG00000042841rbfox3b10073.389ENSACAG00000016093RBFOX39974.790Anolis_carolinensis
ENSAMXG00000042841rbfox3b8573.667ENSANAG00000023457RBFOX310076.508Aotus_nancymaae
ENSAMXG00000042841rbfox3b10084.507ENSACLG00000020011rbfox3b10086.943Astatotilapia_calliptera
ENSAMXG00000042841rbfox3b10078.652ENSACLG00000025552-9779.494Astatotilapia_calliptera
ENSAMXG00000042841rbfox3b7277.255ENSBTAG00000006280RBFOX310059.116Bos_taurus
ENSAMXG00000042841rbfox3b8568.896ENSCJAG00000009563RBFOX310067.403Callithrix_jacchus
ENSAMXG00000042841rbfox3b6881.250ENSCAFG00000005547RBFOX38584.583Canis_familiaris
ENSAMXG00000042841rbfox3b8563.977ENSCAFG00020008126RBFOX39666.851Canis_lupus_dingo
ENSAMXG00000042841rbfox3b8563.689ENSCHIG00000009124RBFOX39667.127Capra_hircus
ENSAMXG00000042841rbfox3b8564.080ENSTSYG00000029617RBFOX310067.493Carlito_syrichta
ENSAMXG00000042841rbfox3b8565.429ENSCPOG00000021703RBFOX310066.575Cavia_porcellus
ENSAMXG00000042841rbfox3b8573.667ENSCCAG00000028450RBFOX310076.508Cebus_capucinus
ENSAMXG00000042841rbfox3b8574.000ENSCATG00000018349RBFOX310076.825Cercocebus_atys
ENSAMXG00000042841rbfox3b8565.230ENSCLAG00000006449RBFOX310066.391Chinchilla_lanigera
ENSAMXG00000042841rbfox3b8574.000ENSCSAG00000002355RBFOX310076.825Chlorocebus_sabaeus
ENSAMXG00000042841rbfox3b9277.778ENSCPBG00000010904RBFOX310078.275Chrysemys_picta_bellii
ENSAMXG00000042841rbfox3b8574.000ENSCANG00000043120RBFOX310076.825Colobus_angolensis_palliatus
ENSAMXG00000042841rbfox3b8562.751ENSCGRG00001019476Rbfox310065.934Cricetulus_griseus_chok1gshd
ENSAMXG00000042841rbfox3b8562.751ENSCGRG00000003268Rbfox310065.934Cricetulus_griseus_crigri
ENSAMXG00000042841rbfox3b10071.348ENSCSEG00000020606RBFOX39671.067Cynoglossus_semilaevis
ENSAMXG00000042841rbfox3b10073.315ENSCSEG00000015567RBFOX39475.281Cynoglossus_semilaevis
ENSAMXG00000042841rbfox3b9486.322ENSCVAG00000006882rbfox3b9982.114Cyprinodon_variegatus
ENSAMXG00000042841rbfox3b10076.323ENSDARG00000010083rbfox3a9979.635Danio_rerio
ENSAMXG00000042841rbfox3b8976.358ENSDARG00000074310rbfox3b9677.928Danio_rerio
ENSAMXG00000042841rbfox3b7363.312ENSDNOG00000039391RBFOX38083.333Dasypus_novemcinctus
ENSAMXG00000042841rbfox3b8559.420ENSDORG00000005352Rbfox310058.611Dipodomys_ordii
ENSAMXG00000042841rbfox3b9364.516ENSEBUG00000002129RBFOX39566.176Eptatretus_burgeri
ENSAMXG00000042841rbfox3b8255.556ENSEBUG00000013559RBFOX38355.892Eptatretus_burgeri
ENSAMXG00000042841rbfox3b8574.172ENSEASG00005005059RBFOX310076.341Equus_asinus_asinus
ENSAMXG00000042841rbfox3b8574.172ENSECAG00000023811RBFOX310076.341Equus_caballus
ENSAMXG00000042841rbfox3b7671.282ENSEEUG00000013974RBFOX37281.967Erinaceus_europaeus
ENSAMXG00000042841rbfox3b5563.021ENSELUG00000009807-5459.048Esox_lucius
ENSAMXG00000042841rbfox3b10085.028ENSELUG00000017963rbfox3b9980.759Esox_lucius
ENSAMXG00000042841rbfox3b10073.109ENSFCAG00000002555RBFOX310076.825Felis_catus
ENSAMXG00000042841rbfox3b9361.944ENSFALG00000012288RBFOX38864.624Ficedula_albicollis
ENSAMXG00000042841rbfox3b8561.714ENSFDAG00000007489RBFOX310063.014Fukomys_damarensis
ENSAMXG00000042841rbfox3b8977.316ENSFHEG00000008550rbfox3b10077.955Fundulus_heteroclitus
ENSAMXG00000042841rbfox3b8962.881ENSGMOG00000019304-9664.266Gadus_morhua
ENSAMXG00000042841rbfox3b10074.648ENSGALG00000032889RBFOX39976.901Gallus_gallus
ENSAMXG00000042841rbfox3b10079.155ENSGAFG00000005025rbfox3b9976.359Gambusia_affinis
ENSAMXG00000042841rbfox3b8567.335ENSGACG00000002138-9668.407Gasterosteus_aculeatus
ENSAMXG00000042841rbfox3b10077.119ENSGAGG00000020025RBFOX310078.594Gopherus_agassizii
ENSAMXG00000042841rbfox3b8574.000ENSGGOG00000012546RBFOX310076.825Gorilla_gorilla
ENSAMXG00000042841rbfox3b9378.593ENSHBUG00000023098-9479.573Haplochromis_burtoni
ENSAMXG00000042841rbfox3b10084.463ENSHBUG00000018099rbfox3b9981.030Haplochromis_burtoni
ENSAMXG00000042841rbfox3b8565.819ENSHGLG00000008679RBFOX310066.667Heterocephalus_glaber_female
ENSAMXG00000042841rbfox3b8563.277ENSHGLG00100014739RBFOX39664.228Heterocephalus_glaber_male
ENSAMXG00000042841rbfox3b8576.744ENSHCOG00000007444RBFOX39370.109Hippocampus_comes
ENSAMXG00000042841rbfox3b8971.429ENSHCOG00000001863RBFOX39272.381Hippocampus_comes
ENSAMXG00000042841rbfox3b10076.323ENSIPUG00000012010rbfox3a9879.635Ictalurus_punctatus
ENSAMXG00000042841rbfox3b8972.754ENSIPUG00000021966rbfox3b9887.925Ictalurus_punctatus
ENSAMXG00000042841rbfox3b8560.265ENSSTOG00000026817RBFOX310063.722Ictidomys_tridecemlineatus
ENSAMXG00000042841rbfox3b8563.977ENSJJAG00000014167Rbfox310067.403Jaculus_jaculus
ENSAMXG00000042841rbfox3b10086.441ENSKMAG00000006726rbfox3b9787.006Kryptolebias_marmoratus
ENSAMXG00000042841rbfox3b10080.618ENSLBEG00000022508-9780.618Labrus_bergylta
ENSAMXG00000042841rbfox3b10086.441ENSLBEG00000004030rbfox3b9787.006Labrus_bergylta
ENSAMXG00000042841rbfox3b9267.324ENSLACG00000018409-9069.577Latimeria_chalumnae
ENSAMXG00000042841rbfox3b9279.755ENSLOCG00000012267rbfox3a9882.209Lepisosteus_oculatus
ENSAMXG00000042841rbfox3b9367.978ENSLAFG00000016623RBFOX39666.851Loxodonta_africana
ENSAMXG00000042841rbfox3b8564.265ENSMFAG00000002247RBFOX310067.680Macaca_fascicularis
ENSAMXG00000042841rbfox3b8574.000ENSMMUG00000023028RBFOX310076.825Macaca_mulatta
ENSAMXG00000042841rbfox3b8574.333ENSMNEG00000041147RBFOX310077.143Macaca_nemestrina
ENSAMXG00000042841rbfox3b8574.000ENSMLEG00000025686RBFOX310076.825Mandrillus_leucophaeus
ENSAMXG00000042841rbfox3b8978.275ENSMAMG00000019810rbfox3b9978.275Mastacembelus_armatus
ENSAMXG00000042841rbfox3b9376.758ENSMAMG00000020600-9376.994Mastacembelus_armatus
ENSAMXG00000042841rbfox3b9157.746ENSMZEG00005003055-8558.592Maylandia_zebra
ENSAMXG00000042841rbfox3b10084.463ENSMZEG00005000781rbfox3b9785.876Maylandia_zebra
ENSAMXG00000042841rbfox3b6473.991ENSMGAG00000005600RBFOX38474.439Meleagris_gallopavo
ENSAMXG00000042841rbfox3b8565.805ENSMAUG00000013543Rbfox310067.218Mesocricetus_auratus
ENSAMXG00000042841rbfox3b9274.691ENSMICG00000014898RBFOX310075.478Microcebus_murinus
ENSAMXG00000042841rbfox3b8562.644ENSMOCG00000015373Rbfox310065.840Microtus_ochrogaster
ENSAMXG00000042841rbfox3b10081.232ENSMMOG00000020193rbfox3b9980.541Mola_mola
ENSAMXG00000042841rbfox3b10073.315ENSMODG00000002089RBFOX39975.562Monodelphis_domestica
ENSAMXG00000042841rbfox3b10078.090ENSMALG00000018270-9778.933Monopterus_albus
ENSAMXG00000042841rbfox3b10085.311ENSMALG00000020407rbfox3b9785.876Monopterus_albus
ENSAMXG00000042841rbfox3b8573.090MGP_CAROLIEiJ_G0017487Rbfox39685.612Mus_caroli
ENSAMXG00000042841rbfox3b8574.751ENSMUSG00000025576Rbfox39685.612Mus_musculus
ENSAMXG00000042841rbfox3b8573.510MGP_PahariEiJ_G0018614Rbfox39686.331Mus_pahari
ENSAMXG00000042841rbfox3b8573.090MGP_SPRETEiJ_G0018331Rbfox39685.612Mus_spretus
ENSAMXG00000042841rbfox3b9368.033ENSMPUG00000012319RBFOX39669.811Mustela_putorius_furo
ENSAMXG00000042841rbfox3b8563.506ENSNGAG00000018006Rbfox310066.942Nannospalax_galili
ENSAMXG00000042841rbfox3b9483.537ENSNBRG00000010102rbfox3b9980.435Neolamprologus_brichardi
ENSAMXG00000042841rbfox3b9370.997ENSNBRG00000022885-9171.471Neolamprologus_brichardi
ENSAMXG00000042841rbfox3b8952.244ENSNLEG00000000153-9552.244Nomascus_leucogenys
ENSAMXG00000042841rbfox3b7276.596ENSMEUG00000004218-10049.307Notamacropus_eugenii
ENSAMXG00000042841rbfox3b7270.466ENSOPRG00000016279-7176.667Ochotona_princeps
ENSAMXG00000042841rbfox3b8576.080ENSODEG00000009433RBFOX310076.266Octodon_degus
ENSAMXG00000042841rbfox3b9279.141ENSONIG00000007282-9778.507Oreochromis_niloticus
ENSAMXG00000042841rbfox3b9486.018ENSONIG00000009549rbfox3b9981.843Oreochromis_niloticus
ENSAMXG00000042841rbfox3b6863.121ENSOCUG00000014217RBFOX37763.121Oryctolagus_cuniculus
ENSAMXG00000042841rbfox3b10085.876ENSORLG00000000905rbfox3b7685.876Oryzias_latipes
ENSAMXG00000042841rbfox3b10085.876ENSORLG00020018030rbfox3b9685.876Oryzias_latipes_hni
ENSAMXG00000042841rbfox3b10086.158ENSORLG00015009200rbfox3b9686.158Oryzias_latipes_hsok
ENSAMXG00000042841rbfox3b8080.936ENSOMEG00000014677rbfox3b8380.635Oryzias_melastigma
ENSAMXG00000042841rbfox3b9572.754ENSOGAG00000029595RBFOX38975.150Otolemur_garnettii
ENSAMXG00000042841rbfox3b9152.747ENSOARG00000002908RBFOX38958.239Ovis_aries
ENSAMXG00000042841rbfox3b7276.471ENSPPAG00000025383RBFOX39976.736Pan_paniscus
ENSAMXG00000042841rbfox3b8564.223ENSPPRG00000007819RBFOX310068.820Panthera_pardus
ENSAMXG00000042841rbfox3b8574.000ENSPTRG00000009727RBFOX310076.825Pan_troglodytes
ENSAMXG00000042841rbfox3b8574.000ENSPANG00000019837RBFOX310076.825Papio_anubis
ENSAMXG00000042841rbfox3b10075.900ENSPKIG00000010299rbfox3a9975.723Paramormyrops_kingsleyae
ENSAMXG00000042841rbfox3b9369.486ENSPKIG00000022633-9666.761Paramormyrops_kingsleyae
ENSAMXG00000042841rbfox3b8783.333ENSPMGG00000008000rbfox3b9683.654Periophthalmus_magnuspinnatus
ENSAMXG00000042841rbfox3b8562.931ENSPEMG00000010500Rbfox310066.116Peromyscus_maniculatus_bairdii
ENSAMXG00000042841rbfox3b10065.757ENSPCIG00000005766RBFOX310067.834Phascolarctos_cinereus
ENSAMXG00000042841rbfox3b9486.322ENSPFOG00000018294rbfox3b9682.337Poecilia_formosa
ENSAMXG00000042841rbfox3b6885.774ENSPLAG00000000481rbfox3b7485.774Poecilia_latipinna
ENSAMXG00000042841rbfox3b8977.636ENSPMEG00000022997rbfox3b10078.275Poecilia_mexicana
ENSAMXG00000042841rbfox3b10086.158ENSPREG00000012886rbfox3b9686.158Poecilia_reticulata
ENSAMXG00000042841rbfox3b8070.000ENSPPYG00000008704RBFOX38870.470Pongo_abelii
ENSAMXG00000042841rbfox3b8562.536ENSPCAG00000001401RBFOX310066.298Procavia_capensis
ENSAMXG00000042841rbfox3b8963.812ENSPCOG00000012689RBFOX310066.575Propithecus_coquereli
ENSAMXG00000042841rbfox3b8557.880ENSPVAG00000015243RBFOX310062.088Pteropus_vampyrus
ENSAMXG00000042841rbfox3b10073.164ENSPNYG00000009079-9373.596Pundamilia_nyererei
ENSAMXG00000042841rbfox3b10074.576ENSPNYG00000010414rbfox3b9674.576Pundamilia_nyererei
ENSAMXG00000042841rbfox3b10076.389ENSPNAG00000002889rbfox3a9778.889Pygocentrus_nattereri
ENSAMXG00000042841rbfox3b8978.914ENSPNAG00000018173rbfox3b9078.914Pygocentrus_nattereri
ENSAMXG00000042841rbfox3b8573.510ENSRNOG00000003386Rbfox310076.025Rattus_norvegicus
ENSAMXG00000042841rbfox3b10072.549ENSRBIG00000040449RBFOX39974.790Rhinopithecus_bieti
ENSAMXG00000042841rbfox3b8574.000ENSRROG00000000766RBFOX310076.825Rhinopithecus_roxellana
ENSAMXG00000042841rbfox3b8573.667ENSSBOG00000031591RBFOX310076.508Saimiri_boliviensis_boliviensis
ENSAMXG00000042841rbfox3b9368.994ENSSHAG00000016076RBFOX310067.834Sarcophilus_harrisii
ENSAMXG00000042841rbfox3b10075.493ENSSFOG00015023260rbfox3a9976.882Scleropages_formosus
ENSAMXG00000042841rbfox3b9968.820ENSSFOG00015004716RBFOX39969.602Scleropages_formosus
ENSAMXG00000042841rbfox3b10077.528ENSSMAG00000019052-10078.730Scophthalmus_maximus
ENSAMXG00000042841rbfox3b9482.029ENSSMAG00000012618rbfox3b8777.519Scophthalmus_maximus
ENSAMXG00000042841rbfox3b8977.316ENSSDUG00000023183rbfox3b10077.955Seriola_dumerili
ENSAMXG00000042841rbfox3b10071.629ENSSDUG00000015801-9572.472Seriola_dumerili
ENSAMXG00000042841rbfox3b10086.158ENSSLDG00000000149rbfox3b9786.723Seriola_lalandi_dorsalis
ENSAMXG00000042841rbfox3b10074.719ENSSLDG00000016098-9575.562Seriola_lalandi_dorsalis
ENSAMXG00000042841rbfox3b10067.978ENSSPUG00000011733RBFOX39977.460Sphenodon_punctatus
ENSAMXG00000042841rbfox3b7774.359ENSSPAG00000004898-8574.306Stegastes_partitus
ENSAMXG00000042841rbfox3b10078.693ENSSPAG00000017571rbfox3b9679.261Stegastes_partitus
ENSAMXG00000042841rbfox3b7776.103ENSSSCG00000039498RBFOX39668.125Sus_scrofa
ENSAMXG00000042841rbfox3b9380.896ENSTRUG00000004894rbfox3b9480.896Takifugu_rubripes
ENSAMXG00000042841rbfox3b9477.839ENSTNIG00000011278rbfox3b9078.393Tetraodon_nigroviridis
ENSAMXG00000042841rbfox3b5358.974ENSTBEG00000004296-8949.398Tupaia_belangeri
ENSAMXG00000042841rbfox3b8559.483ENSTTRG00000003676RBFOX310063.085Tursiops_truncatus
ENSAMXG00000042841rbfox3b8574.000ENSUAMG00000004668RBFOX310076.825Ursus_americanus
ENSAMXG00000042841rbfox3b10073.109ENSVVUG00000017864RBFOX310076.825Vulpes_vulpes
ENSAMXG00000042841rbfox3b9363.610ENSXETG00000020236rbfox38963.099Xenopus_tropicalis
ENSAMXG00000042841rbfox3b9484.802ENSXCOG00000018262rbfox3b10082.637Xiphophorus_couchianus
ENSAMXG00000042841rbfox3b10086.158ENSXMAG00000012939rbfox3b9981.843Xiphophorus_maculatus

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