EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000042972 (Gene tree)
Gene ID: 103043599
Gene Symbol: ehd3
Alias: si:ch211-147c1.2
Full Name: EH domain-containing protein 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 24373 bases
Position: chrAPWO02000120.1:212591-236963
Accession: 103043599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040972	MMR_HSR1	PF01926.23	1.9e-08	1	1
ENSAMXP00000033727	MMR_HSR1	PF01926.23	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043302	-	2450	-	ENSAMXP00000040972	486 (aa)	-	-
ENSAMXT00000055562	-	1662	XM_007241197	ENSAMXP00000033727	553 (aa)	XP_007241259	-

Gene Model

Click here to download ENSAMXG00000042972's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000042972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000042972	ehd3	76	32.208	ENSAMXG00000018789	srl	76	31.234
ENSAMXG00000042972	ehd3	61	37.584	ENSAMXG00000038693	SRL	66	37.584
ENSAMXG00000042972	ehd3	99	80.874	ENSAMXG00000039344	ehd1a	99	80.874
ENSAMXG00000042972	ehd3	99	79.599	ENSAMXG00000031892	-	99	79.599
ENSAMXG00000042972	ehd3	99	72.514	ENSAMXG00000008348	ehd4	98	72.514
ENSAMXG00000042972	ehd3	96	66.048	ENSAMXG00000013748	ehd2a	94	66.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000042972	ehd3	100	87.161	ENSG00000013016	EHD3	100	87.161	Homo_sapiens
ENSAMXG00000042972	ehd3	100	86.799	ENSAMEG00000004282	EHD3	100	86.799	Ailuropoda_melanoleuca
ENSAMXG00000042972	ehd3	100	89.873	ENSACIG00000015462	ehd3	100	89.873	Amphilophus_citrinellus
ENSAMXG00000042972	ehd3	100	76.130	ENSAOCG00000001953	-	100	77.034	Amphiprion_ocellaris
ENSAMXG00000042972	ehd3	100	89.693	ENSAPEG00000018380	ehd3	100	89.693	Amphiprion_percula
ENSAMXG00000042972	ehd3	100	89.693	ENSATEG00000002224	ehd3	100	89.693	Anabas_testudineus
ENSAMXG00000042972	ehd3	100	87.523	ENSAPLG00000010467	EHD3	100	87.523	Anas_platyrhynchos
ENSAMXG00000042972	ehd3	100	83.544	ENSACAG00000007103	EHD3	100	83.544	Anolis_carolinensis
ENSAMXG00000042972	ehd3	100	86.799	ENSANAG00000020422	EHD3	100	86.799	Aotus_nancymaae
ENSAMXG00000042972	ehd3	100	91.320	ENSACLG00000007581	ehd3	100	91.320	Astatotilapia_calliptera
ENSAMXG00000042972	ehd3	100	86.618	ENSBTAG00000001662	EHD3	100	86.618	Bos_taurus
ENSAMXG00000042972	ehd3	100	86.980	ENSCJAG00000003137	EHD3	100	86.980	Callithrix_jacchus
ENSAMXG00000042972	ehd3	100	87.161	ENSCAFG00000005348	EHD3	100	87.161	Canis_familiaris
ENSAMXG00000042972	ehd3	99	84.545	ENSCAFG00020023684	EHD3	98	84.545	Canis_lupus_dingo
ENSAMXG00000042972	ehd3	100	86.618	ENSCHIG00000017794	EHD3	100	86.618	Capra_hircus
ENSAMXG00000042972	ehd3	100	86.980	ENSTSYG00000036583	EHD3	100	86.980	Carlito_syrichta
ENSAMXG00000042972	ehd3	100	87.342	ENSCPOG00000034108	EHD3	100	87.342	Cavia_porcellus
ENSAMXG00000042972	ehd3	100	87.161	ENSCCAG00000029860	EHD3	100	87.161	Cebus_capucinus
ENSAMXG00000042972	ehd3	100	87.342	ENSCATG00000044604	EHD3	100	87.342	Cercocebus_atys
ENSAMXG00000042972	ehd3	100	87.342	ENSCLAG00000010983	EHD3	100	87.342	Chinchilla_lanigera
ENSAMXG00000042972	ehd3	100	87.342	ENSCSAG00000011254	EHD3	100	87.342	Chlorocebus_sabaeus
ENSAMXG00000042972	ehd3	100	88.427	ENSCPBG00000011884	EHD3	100	88.427	Chrysemys_picta_bellii
ENSAMXG00000042972	ehd3	100	87.342	ENSCANG00000024283	EHD3	100	87.342	Colobus_angolensis_palliatus
ENSAMXG00000042972	ehd3	100	86.799	ENSCGRG00001020979	Ehd3	100	86.799	Cricetulus_griseus_chok1gshd
ENSAMXG00000042972	ehd3	100	86.799	ENSCGRG00000013157	Ehd3	100	86.799	Cricetulus_griseus_crigri
ENSAMXG00000042972	ehd3	100	88.788	ENSCSEG00000019195	ehd3	100	88.788	Cynoglossus_semilaevis
ENSAMXG00000042972	ehd3	100	90.235	ENSCVAG00000016197	ehd3	100	90.235	Cyprinodon_variegatus
ENSAMXG00000042972	ehd3	100	91.863	ENSDARG00000007869	ehd3	100	91.863	Danio_rerio
ENSAMXG00000042972	ehd3	100	86.980	ENSDNOG00000039339	EHD3	100	86.980	Dasypus_novemcinctus
ENSAMXG00000042972	ehd3	100	86.980	ENSDORG00000024162	Ehd3	100	86.980	Dipodomys_ordii
ENSAMXG00000042972	ehd3	99	83.577	ENSETEG00000013323	EHD3	98	83.577	Echinops_telfairi
ENSAMXG00000042972	ehd3	100	87.342	ENSEASG00005008635	EHD3	100	87.342	Equus_asinus_asinus
ENSAMXG00000042972	ehd3	100	87.342	ENSECAG00000015195	EHD3	100	87.342	Equus_caballus
ENSAMXG00000042972	ehd3	88	84.170	ENSEEUG00000010447	EHD3	86	84.170	Erinaceus_europaeus
ENSAMXG00000042972	ehd3	98	92.066	ENSELUG00000023984	ehd3	99	92.066	Esox_lucius
ENSAMXG00000042972	ehd3	100	87.342	ENSFCAG00000029627	EHD3	100	87.342	Felis_catus
ENSAMXG00000042972	ehd3	100	87.523	ENSFALG00000011448	EHD3	100	87.523	Ficedula_albicollis
ENSAMXG00000042972	ehd3	100	87.342	ENSFDAG00000017946	EHD3	100	87.342	Fukomys_damarensis
ENSAMXG00000042972	ehd3	100	89.150	ENSFHEG00000018572	ehd3	100	89.150	Fundulus_heteroclitus
ENSAMXG00000042972	ehd3	99	87.477	ENSGMOG00000006447	ehd3	99	87.477	Gadus_morhua
ENSAMXG00000042972	ehd3	100	87.703	ENSGALG00000009086	EHD3	100	87.703	Gallus_gallus
ENSAMXG00000042972	ehd3	100	89.331	ENSGAFG00000005665	ehd3	100	89.331	Gambusia_affinis
ENSAMXG00000042972	ehd3	99	88.385	ENSGACG00000013160	ehd3	96	88.385	Gasterosteus_aculeatus
ENSAMXG00000042972	ehd3	100	88.427	ENSGAGG00000024938	EHD3	100	88.427	Gopherus_agassizii
ENSAMXG00000042972	ehd3	100	87.342	ENSGGOG00000003031	EHD3	100	87.342	Gorilla_gorilla
ENSAMXG00000042972	ehd3	100	89.693	ENSHBUG00000023210	ehd3	100	89.693	Haplochromis_burtoni
ENSAMXG00000042972	ehd3	100	87.161	ENSHGLG00000014803	EHD3	100	87.161	Heterocephalus_glaber_female
ENSAMXG00000042972	ehd3	100	87.161	ENSHGLG00100011636	EHD3	100	87.161	Heterocephalus_glaber_male
ENSAMXG00000042972	ehd3	100	88.608	ENSHCOG00000018418	ehd3	100	88.608	Hippocampus_comes
ENSAMXG00000042972	ehd3	100	91.501	ENSIPUG00000004603	Ehd3	100	91.501	Ictalurus_punctatus
ENSAMXG00000042972	ehd3	100	86.618	ENSSTOG00000028279	EHD3	100	86.618	Ictidomys_tridecemlineatus
ENSAMXG00000042972	ehd3	100	87.523	ENSJJAG00000013415	Ehd3	100	87.523	Jaculus_jaculus
ENSAMXG00000042972	ehd3	100	89.331	ENSKMAG00000018498	ehd3	100	89.331	Kryptolebias_marmoratus
ENSAMXG00000042972	ehd3	100	89.150	ENSLBEG00000009464	ehd3	100	89.150	Labrus_bergylta
ENSAMXG00000042972	ehd3	100	90.416	ENSLOCG00000016786	ehd3	100	90.416	Lepisosteus_oculatus
ENSAMXG00000042972	ehd3	99	86.388	ENSLAFG00000016215	EHD3	96	86.388	Loxodonta_africana
ENSAMXG00000042972	ehd3	100	86.980	ENSMFAG00000033132	EHD3	100	86.980	Macaca_fascicularis
ENSAMXG00000042972	ehd3	100	86.980	ENSMMUG00000003476	EHD3	100	86.980	Macaca_mulatta
ENSAMXG00000042972	ehd3	100	87.161	ENSMNEG00000041202	EHD3	100	87.161	Macaca_nemestrina
ENSAMXG00000042972	ehd3	100	87.342	ENSMLEG00000023912	EHD3	100	87.342	Mandrillus_leucophaeus
ENSAMXG00000042972	ehd3	100	89.693	ENSMAMG00000014744	ehd3	100	89.693	Mastacembelus_armatus
ENSAMXG00000042972	ehd3	100	89.693	ENSMZEG00005012558	ehd3	100	89.693	Maylandia_zebra
ENSAMXG00000042972	ehd3	100	87.342	ENSMAUG00000013239	Ehd3	100	87.342	Mesocricetus_auratus
ENSAMXG00000042972	ehd3	100	85.895	ENSMICG00000043744	EHD3	100	85.895	Microcebus_murinus
ENSAMXG00000042972	ehd3	100	87.161	ENSMOCG00000012572	Ehd3	100	87.161	Microtus_ochrogaster
ENSAMXG00000042972	ehd3	100	75.588	ENSMMOG00000015157	ehd3	100	76.492	Mola_mola
ENSAMXG00000042972	ehd3	100	87.342	ENSMODG00000015505	EHD3	100	87.342	Monodelphis_domestica
ENSAMXG00000042972	ehd3	100	89.512	ENSMALG00000015586	ehd3	100	89.512	Monopterus_albus
ENSAMXG00000042972	ehd3	100	87.342	MGP_CAROLIEiJ_G0021870	Ehd3	100	87.342	Mus_caroli
ENSAMXG00000042972	ehd3	100	87.342	ENSMUSG00000024065	Ehd3	100	87.342	Mus_musculus
ENSAMXG00000042972	ehd3	100	87.161	MGP_PahariEiJ_G0020857	Ehd3	100	87.161	Mus_pahari
ENSAMXG00000042972	ehd3	100	87.342	MGP_SPRETEiJ_G0022782	Ehd3	100	87.342	Mus_spretus
ENSAMXG00000042972	ehd3	89	87.449	ENSMPUG00000005148	EHD3	100	87.449	Mustela_putorius_furo
ENSAMXG00000042972	ehd3	100	84.448	ENSMLUG00000008050	EHD3	100	84.448	Myotis_lucifugus
ENSAMXG00000042972	ehd3	100	87.342	ENSNGAG00000014439	Ehd3	100	87.342	Nannospalax_galili
ENSAMXG00000042972	ehd3	100	89.693	ENSNBRG00000022653	ehd3	100	89.693	Neolamprologus_brichardi
ENSAMXG00000042972	ehd3	89	90.951	ENSNLEG00000015546	EHD3	100	86.895	Nomascus_leucogenys
ENSAMXG00000042972	ehd3	99	86.570	ENSOPRG00000012242	EHD3	98	86.570	Ochotona_princeps
ENSAMXG00000042972	ehd3	100	88.065	ENSODEG00000008117	EHD3	100	88.065	Octodon_degus
ENSAMXG00000042972	ehd3	100	90.054	ENSONIG00000000693	ehd3	100	90.054	Oreochromis_niloticus
ENSAMXG00000042972	ehd3	100	87.342	ENSOCUG00000001228	EHD3	100	87.342	Oryctolagus_cuniculus
ENSAMXG00000042972	ehd3	100	90.235	ENSORLG00000017118	ehd3	100	90.235	Oryzias_latipes
ENSAMXG00000042972	ehd3	100	88.427	ENSORLG00020002121	ehd3	100	88.427	Oryzias_latipes_hni
ENSAMXG00000042972	ehd3	100	90.235	ENSORLG00015020550	ehd3	100	90.235	Oryzias_latipes_hsok
ENSAMXG00000042972	ehd3	100	89.693	ENSOMEG00000000506	ehd3	100	89.693	Oryzias_melastigma
ENSAMXG00000042972	ehd3	100	86.799	ENSOGAG00000000397	EHD3	100	86.799	Otolemur_garnettii
ENSAMXG00000042972	ehd3	100	83.906	ENSOARG00000019698	EHD3	100	85.353	Ovis_aries
ENSAMXG00000042972	ehd3	100	87.342	ENSPPAG00000035288	EHD3	100	87.342	Pan_paniscus
ENSAMXG00000042972	ehd3	100	87.161	ENSPPRG00000002225	EHD3	100	87.161	Panthera_pardus
ENSAMXG00000042972	ehd3	100	87.342	ENSPTIG00000013343	EHD3	100	87.342	Panthera_tigris_altaica
ENSAMXG00000042972	ehd3	100	87.342	ENSPTRG00000011805	EHD3	100	87.342	Pan_troglodytes
ENSAMXG00000042972	ehd3	100	87.342	ENSPANG00000023120	EHD3	100	87.342	Papio_anubis
ENSAMXG00000042972	ehd3	100	91.139	ENSPKIG00000001422	ehd3	100	91.139	Paramormyrops_kingsleyae
ENSAMXG00000042972	ehd3	100	87.523	ENSPSIG00000017757	EHD3	100	87.523	Pelodiscus_sinensis
ENSAMXG00000042972	ehd3	100	88.788	ENSPMGG00000007882	ehd3	100	88.788	Periophthalmus_magnuspinnatus
ENSAMXG00000042972	ehd3	100	88.788	ENSPCIG00000008811	EHD3	100	88.788	Phascolarctos_cinereus
ENSAMXG00000042972	ehd3	100	89.873	ENSPFOG00000010935	ehd3	100	89.873	Poecilia_formosa
ENSAMXG00000042972	ehd3	100	89.693	ENSPLAG00000001005	ehd3	100	89.693	Poecilia_latipinna
ENSAMXG00000042972	ehd3	100	89.873	ENSPMEG00000006514	ehd3	100	89.873	Poecilia_mexicana
ENSAMXG00000042972	ehd3	100	90.054	ENSPREG00000012884	ehd3	100	90.054	Poecilia_reticulata
ENSAMXG00000042972	ehd3	100	87.523	ENSPPYG00000012514	EHD3	100	87.523	Pongo_abelii
ENSAMXG00000042972	ehd3	90	85.685	ENSPCAG00000008166	EHD3	100	85.685	Procavia_capensis
ENSAMXG00000042972	ehd3	100	86.438	ENSPCOG00000013548	EHD3	100	86.438	Propithecus_coquereli
ENSAMXG00000042972	ehd3	98	87.037	ENSPVAG00000002680	EHD3	100	87.037	Pteropus_vampyrus
ENSAMXG00000042972	ehd3	100	89.693	ENSPNYG00000003812	ehd3	100	89.693	Pundamilia_nyererei
ENSAMXG00000042972	ehd3	100	92.767	ENSPNAG00000028984	ehd3	100	92.767	Pygocentrus_nattereri
ENSAMXG00000042972	ehd3	100	87.342	ENSRNOG00000007744	Ehd3	100	87.342	Rattus_norvegicus
ENSAMXG00000042972	ehd3	99	87.614	ENSRBIG00000033877	EHD3	100	82.463	Rhinopithecus_bieti
ENSAMXG00000042972	ehd3	100	87.342	ENSRROG00000045782	EHD3	100	87.342	Rhinopithecus_roxellana
ENSAMXG00000042972	ehd3	100	86.980	ENSSBOG00000030935	EHD3	100	86.980	Saimiri_boliviensis_boliviensis
ENSAMXG00000042972	ehd3	100	86.980	ENSSHAG00000013011	EHD3	100	86.980	Sarcophilus_harrisii
ENSAMXG00000042972	ehd3	100	90.778	ENSSFOG00015014110	ehd3	100	90.778	Scleropages_formosus
ENSAMXG00000042972	ehd3	100	88.608	ENSSMAG00000008537	ehd3	100	88.608	Scophthalmus_maximus
ENSAMXG00000042972	ehd3	100	89.873	ENSSDUG00000010820	ehd3	100	89.873	Seriola_dumerili
ENSAMXG00000042972	ehd3	100	88.246	ENSSLDG00000025510	ehd3	100	88.246	Seriola_lalandi_dorsalis
ENSAMXG00000042972	ehd3	99	88.022	ENSSPUG00000014730	EHD3	99	88.022	Sphenodon_punctatus
ENSAMXG00000042972	ehd3	100	89.512	ENSSPAG00000013275	ehd3	100	89.512	Stegastes_partitus
ENSAMXG00000042972	ehd3	100	86.618	ENSSSCG00000035987	EHD3	100	86.618	Sus_scrofa
ENSAMXG00000042972	ehd3	100	85.921	ENSTGUG00000004572	EHD3	100	85.921	Taeniopygia_guttata
ENSAMXG00000042972	ehd3	100	88.969	ENSTRUG00000014338	ehd3	100	88.969	Takifugu_rubripes
ENSAMXG00000042972	ehd3	99	88.949	ENSTNIG00000010948	ehd3	99	88.949	Tetraodon_nigroviridis
ENSAMXG00000042972	ehd3	99	85.792	ENSTBEG00000010371	EHD3	97	85.792	Tupaia_belangeri
ENSAMXG00000042972	ehd3	100	82.821	ENSTTRG00000000167	EHD3	100	82.821	Tursiops_truncatus
ENSAMXG00000042972	ehd3	100	87.342	ENSUAMG00000022243	EHD3	100	87.342	Ursus_americanus
ENSAMXG00000042972	ehd3	99	86.413	ENSUMAG00000019931	EHD3	100	86.492	Ursus_maritimus
ENSAMXG00000042972	ehd3	100	87.161	ENSVVUG00000007563	EHD3	98	87.161	Vulpes_vulpes
ENSAMXG00000042972	ehd3	100	87.161	ENSXETG00000022070	ehd3	100	87.161	Xenopus_tropicalis
ENSAMXG00000042972	ehd3	100	89.693	ENSXMAG00000025261	ehd3	100	89.693	Xiphophorus_maculatus