EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000043003 (Gene tree)
Gene ID: 103022556
Gene Symbol: rab34a
Alias: rab34|zgc:101620
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6840 bases
Position: chr1:22947607-22954446
Accession: 103022556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039000	MMR_HSR1	PF01926.23	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042364	-	1491	XM_007248608	ENSAMXP00000039000	258 (aa)	XP_007248670	W5K929

Gene Model

Click here to download ENSAMXG00000043003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000043003	rab34a	62	38.650	ENSAMXG00000032564	rab1ab	78	38.650
ENSAMXG00000043003	rab34a	65	38.095	ENSAMXG00000009640	rab14	77	38.095
ENSAMXG00000043003	rab34a	73	35.897	ENSAMXG00000038243	si:dkey-16l2.16	95	34.762
ENSAMXG00000043003	rab34a	62	36.250	ENSAMXG00000004882	rab12	64	36.250
ENSAMXG00000043003	rab34a	69	32.402	ENSAMXG00000036179	rab5aa	81	32.402
ENSAMXG00000043003	rab34a	79	35.784	ENSAMXG00000039865	rab35b	96	35.784
ENSAMXG00000043003	rab34a	60	40.260	ENSAMXG00000033216	rab41	77	40.260
ENSAMXG00000043003	rab34a	62	41.875	ENSAMXG00000030712	rab13	78	41.875
ENSAMXG00000043003	rab34a	100	65.891	ENSAMXG00000006018	rab34b	100	65.891
ENSAMXG00000043003	rab34a	67	37.931	ENSAMXG00000004630	rab6ba	86	37.931
ENSAMXG00000043003	rab34a	99	53.788	ENSAMXG00000017266	rab36	100	53.788
ENSAMXG00000043003	rab34a	60	35.032	ENSAMXG00000037623	-	70	35.032
ENSAMXG00000043003	rab34a	64	38.554	ENSAMXG00000003717	rab39bb	77	38.554
ENSAMXG00000043003	rab34a	79	31.579	ENSAMXG00000029712	rab25b	93	31.579
ENSAMXG00000043003	rab34a	79	32.536	ENSAMXG00000032729	rab42a	96	32.536
ENSAMXG00000043003	rab34a	65	37.126	ENSAMXG00000033470	RAB15	77	37.126
ENSAMXG00000043003	rab34a	79	32.227	ENSAMXG00000039737	RAB19	92	32.227
ENSAMXG00000043003	rab34a	79	37.559	ENSAMXG00000039486	zgc:171927	96	37.559
ENSAMXG00000043003	rab34a	62	36.875	ENSAMXG00000013054	rab22a	80	36.875
ENSAMXG00000043003	rab34a	79	31.373	ENSAMXG00000040879	rab25a	93	31.373
ENSAMXG00000043003	rab34a	65	37.725	ENSAMXG00000043951	rab15	78	37.725
ENSAMXG00000043003	rab34a	62	40.373	ENSAMXG00000032547	rab6a	76	39.752
ENSAMXG00000043003	rab34a	62	33.750	ENSAMXG00000035919	rab5ab	72	33.750
ENSAMXG00000043003	rab34a	66	34.270	ENSAMXG00000032663	si:dkey-13a21.4	81	34.270
ENSAMXG00000043003	rab34a	60	33.548	ENSAMXG00000024632	rab11al	74	33.548
ENSAMXG00000043003	rab34a	64	32.353	ENSAMXG00000025889	RAB9A	83	32.353
ENSAMXG00000043003	rab34a	65	38.095	ENSAMXG00000040126	-	61	38.095
ENSAMXG00000043003	rab34a	64	38.554	ENSAMXG00000041657	rab39ba	77	38.554
ENSAMXG00000043003	rab34a	75	36.410	ENSAMXG00000003547	rab1ba	80	36.410
ENSAMXG00000043003	rab34a	80	35.749	ENSAMXG00000037428	-	94	35.749
ENSAMXG00000043003	rab34a	64	35.758	ENSAMXG00000036772	rab2a	76	35.758
ENSAMXG00000043003	rab34a	62	37.423	ENSAMXG00000034850	-	78	37.423
ENSAMXG00000043003	rab34a	62	36.875	ENSAMXG00000009935	rab30	63	36.875
ENSAMXG00000043003	rab34a	63	31.902	ENSAMXG00000042419	rab3c	73	31.902
ENSAMXG00000043003	rab34a	70	35.484	ENSAMXG00000014960	rab23	81	37.563
ENSAMXG00000043003	rab34a	79	31.604	ENSAMXG00000042655	rab11bb	94	31.604
ENSAMXG00000043003	rab34a	79	35.784	ENSAMXG00000040604	-	96	35.784
ENSAMXG00000043003	rab34a	62	33.125	ENSAMXG00000037267	-	92	30.882
ENSAMXG00000043003	rab34a	62	32.500	ENSAMXG00000043717	rab5c	71	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043003	rab34a	99	77.132	ENSG00000109113	RAB34	100	78.523	Homo_sapiens
ENSAMXG00000043003	rab34a	100	83.398	ENSAPOG00000003165	rab34a	97	83.398	Acanthochromis_polyacanthus
ENSAMXG00000043003	rab34a	99	77.907	ENSAMEG00000004697	RAB34	82	77.907	Ailuropoda_melanoleuca
ENSAMXG00000043003	rab34a	86	78.475	ENSACIG00000008620	rab34a	100	78.475	Amphilophus_citrinellus
ENSAMXG00000043003	rab34a	100	83.784	ENSAOCG00000018544	rab34a	97	83.784	Amphiprion_ocellaris
ENSAMXG00000043003	rab34a	100	84.170	ENSAPEG00000010503	rab34a	97	84.170	Amphiprion_percula
ENSAMXG00000043003	rab34a	100	85.000	ENSATEG00000023047	rab34a	97	85.000	Anabas_testudineus
ENSAMXG00000043003	rab34a	99	78.295	ENSANAG00000023861	RAB34	99	78.295	Aotus_nancymaae
ENSAMXG00000043003	rab34a	100	84.231	ENSACLG00000005093	rab34a	97	84.231	Astatotilapia_calliptera
ENSAMXG00000043003	rab34a	91	81.702	ENSBTAG00000046129	RAB34	99	70.629	Bos_taurus
ENSAMXG00000043003	rab34a	99	77.907	ENSCJAG00000013101	RAB34	99	77.907	Callithrix_jacchus
ENSAMXG00000043003	rab34a	99	76.744	ENSCAFG00000018780	RAB34	99	76.744	Canis_familiaris
ENSAMXG00000043003	rab34a	99	76.744	ENSCAFG00020011740	RAB34	99	76.744	Canis_lupus_dingo
ENSAMXG00000043003	rab34a	99	78.295	ENSCHIG00000014703	RAB34	99	78.295	Capra_hircus
ENSAMXG00000043003	rab34a	99	77.519	ENSTSYG00000030891	RAB34	99	77.519	Carlito_syrichta
ENSAMXG00000043003	rab34a	91	80.851	ENSCAPG00000008237	RAB34	98	80.851	Cavia_aperea
ENSAMXG00000043003	rab34a	99	77.519	ENSCPOG00000001449	RAB34	99	77.519	Cavia_porcellus
ENSAMXG00000043003	rab34a	99	78.295	ENSCCAG00000034632	RAB34	99	78.295	Cebus_capucinus
ENSAMXG00000043003	rab34a	99	78.295	ENSCLAG00000009672	RAB34	99	78.295	Chinchilla_lanigera
ENSAMXG00000043003	rab34a	99	75.969	ENSCSAG00000007143	RAB34	99	75.969	Chlorocebus_sabaeus
ENSAMXG00000043003	rab34a	99	75.581	ENSCHOG00000009871	RAB34	99	75.581	Choloepus_hoffmanni
ENSAMXG00000043003	rab34a	100	76.448	ENSCPBG00000020275	RAB34	99	76.744	Chrysemys_picta_bellii
ENSAMXG00000043003	rab34a	99	76.357	ENSCANG00000033566	RAB34	99	76.357	Colobus_angolensis_palliatus
ENSAMXG00000043003	rab34a	99	79.070	ENSCGRG00001000893	Rab34	99	79.070	Cricetulus_griseus_chok1gshd
ENSAMXG00000043003	rab34a	99	79.070	ENSCGRG00000017588	Rab34	99	79.070	Cricetulus_griseus_crigri
ENSAMXG00000043003	rab34a	100	82.625	ENSCSEG00000012961	rab34a	100	82.625	Cynoglossus_semilaevis
ENSAMXG00000043003	rab34a	100	81.467	ENSCVAG00000018191	rab34a	97	81.467	Cyprinodon_variegatus
ENSAMXG00000043003	rab34a	100	88.846	ENSDARG00000045628	rab34a	100	90.041	Danio_rerio
ENSAMXG00000043003	rab34a	99	77.132	ENSDNOG00000019485	RAB34	99	77.132	Dasypus_novemcinctus
ENSAMXG00000043003	rab34a	99	77.519	ENSDORG00000011452	Rab34	99	77.519	Dipodomys_ordii
ENSAMXG00000043003	rab34a	99	77.907	ENSEASG00005009898	RAB34	99	77.907	Equus_asinus_asinus
ENSAMXG00000043003	rab34a	99	77.606	ENSECAG00000007212	RAB34	99	77.606	Equus_caballus
ENSAMXG00000043003	rab34a	59	84.868	ENSEEUG00000004731	RAB34	100	84.868	Erinaceus_europaeus
ENSAMXG00000043003	rab34a	99	83.333	ENSELUG00000022157	rab34a	98	83.333	Esox_lucius
ENSAMXG00000043003	rab34a	99	78.295	ENSFCAG00000003937	RAB34	99	78.295	Felis_catus
ENSAMXG00000043003	rab34a	99	77.519	ENSFDAG00000016178	RAB34	99	77.519	Fukomys_damarensis
ENSAMXG00000043003	rab34a	100	82.239	ENSFHEG00000013691	rab34a	100	82.239	Fundulus_heteroclitus
ENSAMXG00000043003	rab34a	100	82.239	ENSGMOG00000016238	rab34a	97	82.239	Gadus_morhua
ENSAMXG00000043003	rab34a	100	74.903	ENSGALG00000026315	RAB34	100	74.903	Gallus_gallus
ENSAMXG00000043003	rab34a	100	82.625	ENSGAFG00000012579	rab34a	97	82.625	Gambusia_affinis
ENSAMXG00000043003	rab34a	100	83.012	ENSGACG00000011190	rab34a	97	83.012	Gasterosteus_aculeatus
ENSAMXG00000043003	rab34a	86	77.477	ENSGAGG00000012473	RAB34	90	79.904	Gopherus_agassizii
ENSAMXG00000043003	rab34a	99	77.132	ENSGGOG00000016726	RAB34	99	77.132	Gorilla_gorilla
ENSAMXG00000043003	rab34a	100	84.556	ENSHBUG00000016064	rab34a	97	84.556	Haplochromis_burtoni
ENSAMXG00000043003	rab34a	100	76.834	ENSHGLG00000008023	RAB34	100	76.834	Heterocephalus_glaber_female
ENSAMXG00000043003	rab34a	100	76.834	ENSHGLG00100017982	RAB34	100	76.834	Heterocephalus_glaber_male
ENSAMXG00000043003	rab34a	100	79.457	ENSHCOG00000020527	rab34a	97	79.457	Hippocampus_comes
ENSAMXG00000043003	rab34a	100	86.873	ENSIPUG00000017447	rab34a	100	86.873	Ictalurus_punctatus
ENSAMXG00000043003	rab34a	99	77.519	ENSSTOG00000025062	RAB34	99	77.519	Ictidomys_tridecemlineatus
ENSAMXG00000043003	rab34a	99	78.682	ENSJJAG00000010285	Rab34	99	78.682	Jaculus_jaculus
ENSAMXG00000043003	rab34a	100	80.309	ENSKMAG00000019647	rab34a	97	80.309	Kryptolebias_marmoratus
ENSAMXG00000043003	rab34a	100	84.170	ENSLBEG00000026006	rab34a	97	84.170	Labrus_bergylta
ENSAMXG00000043003	rab34a	100	75.676	ENSLACG00000001081	RAB34	100	75.676	Latimeria_chalumnae
ENSAMXG00000043003	rab34a	100	84.170	ENSLOCG00000005802	rab34a	97	84.170	Lepisosteus_oculatus
ENSAMXG00000043003	rab34a	100	77.606	ENSLAFG00000013385	RAB34	100	77.606	Loxodonta_africana
ENSAMXG00000043003	rab34a	99	76.357	ENSMFAG00000045768	RAB34	99	76.357	Macaca_fascicularis
ENSAMXG00000043003	rab34a	99	76.357	ENSMMUG00000007293	RAB34	99	76.357	Macaca_mulatta
ENSAMXG00000043003	rab34a	99	76.448	ENSMNEG00000030368	RAB34	99	76.448	Macaca_nemestrina
ENSAMXG00000043003	rab34a	83	80.841	ENSMLEG00000034269	RAB34	95	80.841	Mandrillus_leucophaeus
ENSAMXG00000043003	rab34a	100	84.231	ENSMAMG00000018672	rab34a	97	84.231	Mastacembelus_armatus
ENSAMXG00000043003	rab34a	100	84.556	ENSMZEG00005008306	rab34a	97	84.556	Maylandia_zebra
ENSAMXG00000043003	rab34a	99	79.070	ENSMAUG00000017730	Rab34	99	79.070	Mesocricetus_auratus
ENSAMXG00000043003	rab34a	99	77.992	ENSMICG00000016913	RAB34	99	77.992	Microcebus_murinus
ENSAMXG00000043003	rab34a	99	78.295	ENSMOCG00000016580	Rab34	99	78.295	Microtus_ochrogaster
ENSAMXG00000043003	rab34a	100	74.809	ENSMMOG00000014400	rab34a	100	74.809	Mola_mola
ENSAMXG00000043003	rab34a	91	68.220	ENSMODG00000019295	RAB34	88	68.220	Monodelphis_domestica
ENSAMXG00000043003	rab34a	100	82.625	ENSMALG00000016715	rab34a	97	82.625	Monopterus_albus
ENSAMXG00000043003	rab34a	99	78.682	MGP_CAROLIEiJ_G0016794	Rab34	99	78.682	Mus_caroli
ENSAMXG00000043003	rab34a	99	78.295	ENSMUSG00000002059	Rab34	99	78.469	Mus_musculus
ENSAMXG00000043003	rab34a	99	77.907	MGP_PahariEiJ_G0017931	Rab34	99	77.907	Mus_pahari
ENSAMXG00000043003	rab34a	99	78.295	MGP_SPRETEiJ_G0017637	Rab34	99	78.295	Mus_spretus
ENSAMXG00000043003	rab34a	99	77.132	ENSMPUG00000014191	RAB34	99	77.132	Mustela_putorius_furo
ENSAMXG00000043003	rab34a	81	83.254	ENSMLUG00000012440	RAB34	99	83.254	Myotis_lucifugus
ENSAMXG00000043003	rab34a	99	77.519	ENSNGAG00000002744	Rab34	99	77.519	Nannospalax_galili
ENSAMXG00000043003	rab34a	100	84.615	ENSNBRG00000019750	rab34a	100	84.615	Neolamprologus_brichardi
ENSAMXG00000043003	rab34a	99	76.357	ENSNLEG00000002777	RAB34	99	76.357	Nomascus_leucogenys
ENSAMXG00000043003	rab34a	91	79.661	ENSMEUG00000009450	RAB34	98	79.661	Notamacropus_eugenii
ENSAMXG00000043003	rab34a	99	77.519	ENSOPRG00000012602	RAB34	99	77.519	Ochotona_princeps
ENSAMXG00000043003	rab34a	99	76.744	ENSODEG00000012270	RAB34	99	76.744	Octodon_degus
ENSAMXG00000043003	rab34a	100	84.170	ENSONIG00000013175	rab34a	97	84.170	Oreochromis_niloticus
ENSAMXG00000043003	rab34a	100	63.707	ENSOANG00000000147	RAB34	100	63.707	Ornithorhynchus_anatinus
ENSAMXG00000043003	rab34a	99	78.295	ENSOCUG00000023006	RAB34	82	78.295	Oryctolagus_cuniculus
ENSAMXG00000043003	rab34a	100	82.625	ENSORLG00000004394	rab34a	97	82.625	Oryzias_latipes
ENSAMXG00000043003	rab34a	100	83.012	ENSORLG00020010041	rab34a	97	83.012	Oryzias_latipes_hni
ENSAMXG00000043003	rab34a	100	83.398	ENSORLG00015014829	rab34a	97	83.398	Oryzias_latipes_hsok
ENSAMXG00000043003	rab34a	99	80.934	ENSOMEG00000003647	rab34a	84	80.934	Oryzias_melastigma
ENSAMXG00000043003	rab34a	99	77.907	ENSOARG00000003396	RAB34	95	77.907	Ovis_aries
ENSAMXG00000043003	rab34a	99	77.132	ENSPPAG00000037180	RAB34	99	77.132	Pan_paniscus
ENSAMXG00000043003	rab34a	99	78.295	ENSPPRG00000001286	RAB34	99	78.295	Panthera_pardus
ENSAMXG00000043003	rab34a	99	78.295	ENSPTIG00000021241	RAB34	99	78.295	Panthera_tigris_altaica
ENSAMXG00000043003	rab34a	99	77.132	ENSPTRG00000008931	RAB34	99	77.132	Pan_troglodytes
ENSAMXG00000043003	rab34a	99	76.357	ENSPANG00000023435	RAB34	99	76.357	Papio_anubis
ENSAMXG00000043003	rab34a	99	85.659	ENSPKIG00000006695	rab34a	99	85.659	Paramormyrops_kingsleyae
ENSAMXG00000043003	rab34a	100	83.012	ENSPMGG00000004027	rab34a	100	83.012	Periophthalmus_magnuspinnatus
ENSAMXG00000043003	rab34a	99	78.682	ENSPEMG00000015055	Rab34	99	78.682	Peromyscus_maniculatus_bairdii
ENSAMXG00000043003	rab34a	100	77.220	ENSPCIG00000017945	-	65	77.220	Phascolarctos_cinereus
ENSAMXG00000043003	rab34a	100	81.783	ENSPFOG00000008547	rab34a	83	81.783	Poecilia_formosa
ENSAMXG00000043003	rab34a	100	82.171	ENSPLAG00000022991	rab34a	92	82.171	Poecilia_latipinna
ENSAMXG00000043003	rab34a	100	82.171	ENSPMEG00000002086	rab34a	97	82.171	Poecilia_mexicana
ENSAMXG00000043003	rab34a	80	82.524	ENSPREG00000008951	rab34a	83	82.524	Poecilia_reticulata
ENSAMXG00000043003	rab34a	99	74.419	ENSPPYG00000008107	-	99	74.419	Pongo_abelii
ENSAMXG00000043003	rab34a	99	75.194	ENSPCAG00000016994	RAB34	99	75.194	Procavia_capensis
ENSAMXG00000043003	rab34a	99	78.295	ENSPCOG00000021648	RAB34	99	78.295	Propithecus_coquereli
ENSAMXG00000043003	rab34a	99	77.519	ENSPVAG00000002921	RAB34	99	77.519	Pteropus_vampyrus
ENSAMXG00000043003	rab34a	100	84.615	ENSPNYG00000017514	rab34a	100	84.615	Pundamilia_nyererei
ENSAMXG00000043003	rab34a	100	92.278	ENSPNAG00000003179	rab34a	100	92.278	Pygocentrus_nattereri
ENSAMXG00000043003	rab34a	99	77.907	ENSRNOG00000023375	Rab34	99	77.907	Rattus_norvegicus
ENSAMXG00000043003	rab34a	99	75.581	ENSRBIG00000038841	RAB34	99	75.581	Rhinopithecus_bieti
ENSAMXG00000043003	rab34a	99	75.581	ENSRROG00000004951	RAB34	99	75.581	Rhinopithecus_roxellana
ENSAMXG00000043003	rab34a	99	75.194	ENSSBOG00000029883	RAB34	99	75.194	Saimiri_boliviensis_boliviensis
ENSAMXG00000043003	rab34a	98	79.134	ENSSHAG00000014522	RAB34	77	79.134	Sarcophilus_harrisii
ENSAMXG00000043003	rab34a	99	84.109	ENSSFOG00015004325	rab34a	99	84.109	Scleropages_formosus
ENSAMXG00000043003	rab34a	100	84.231	ENSSMAG00000004343	rab34a	97	84.231	Scophthalmus_maximus
ENSAMXG00000043003	rab34a	100	83.784	ENSSDUG00000010942	rab34a	97	83.784	Seriola_dumerili
ENSAMXG00000043003	rab34a	100	83.398	ENSSLDG00000009573	rab34a	97	83.398	Seriola_lalandi_dorsalis
ENSAMXG00000043003	rab34a	100	84.942	ENSSPAG00000017348	rab34a	97	84.942	Stegastes_partitus
ENSAMXG00000043003	rab34a	99	77.907	ENSSSCG00000017769	RAB34	99	77.907	Sus_scrofa
ENSAMXG00000043003	rab34a	100	64.479	ENSTRUG00000010393	-	100	64.479	Takifugu_rubripes
ENSAMXG00000043003	rab34a	79	78.537	ENSTRUG00000005937	rab34a	91	78.537	Takifugu_rubripes
ENSAMXG00000043003	rab34a	100	81.081	ENSTNIG00000016231	rab34a	100	81.081	Tetraodon_nigroviridis
ENSAMXG00000043003	rab34a	99	78.682	ENSTBEG00000005193	RAB34	99	78.682	Tupaia_belangeri
ENSAMXG00000043003	rab34a	99	77.519	ENSTTRG00000004102	RAB34	99	77.519	Tursiops_truncatus
ENSAMXG00000043003	rab34a	99	78.295	ENSUAMG00000005003	RAB34	99	78.295	Ursus_americanus
ENSAMXG00000043003	rab34a	91	81.702	ENSUMAG00000011766	-	62	81.702	Ursus_maritimus
ENSAMXG00000043003	rab34a	99	76.744	ENSVVUG00000017083	RAB34	99	76.744	Vulpes_vulpes
ENSAMXG00000043003	rab34a	100	76.834	ENSXETG00000019257	rab34	100	76.834	Xenopus_tropicalis
ENSAMXG00000043003	rab34a	100	81.853	ENSXCOG00000009541	rab34a	100	81.853	Xiphophorus_couchianus
ENSAMXG00000043003	rab34a	100	82.625	ENSXMAG00000026496	rab34a	97	82.625	Xiphophorus_maculatus