EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000043011 (Gene tree)
Gene ID: 103034974
Gene Symbol: srp19
Alias: zgc:63961
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4775 bases
Position: chr6:25545939-25550713
Accession: 103034974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040737	SRP19	PF01922.17	4.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054167	-	2155	XM_007260762	ENSAMXP00000040737	139 (aa)	XP_007260824	UPI000BBD4E82

Gene Model

Click here to download ENSAMXG00000043011's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043011's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043011	srp19	91	68.217	ENSG00000153037	SRP19	95	65.657	Homo_sapiens
ENSAMXG00000043011	srp19	94	82.707	ENSAPOG00000002199	srp19	92	82.443	Acanthochromis_polyacanthus
ENSAMXG00000043011	srp19	90	69.531	ENSAMEG00000012623	SRP19	87	69.291	Ailuropoda_melanoleuca
ENSAMXG00000043011	srp19	94	81.203	ENSACIG00000005082	srp19	92	80.916	Amphilophus_citrinellus
ENSAMXG00000043011	srp19	94	81.955	ENSAOCG00000002718	srp19	93	81.679	Amphiprion_ocellaris
ENSAMXG00000043011	srp19	94	81.203	ENSAPEG00000022170	srp19	93	80.916	Amphiprion_percula
ENSAMXG00000043011	srp19	94	84.962	ENSATEG00000012472	srp19	93	84.733	Anabas_testudineus
ENSAMXG00000043011	srp19	80	65.789	ENSAPLG00000002624	SRP19	92	65.789	Anas_platyrhynchos
ENSAMXG00000043011	srp19	94	64.179	ENSACAG00000007550	SRP19	86	66.667	Anolis_carolinensis
ENSAMXG00000043011	srp19	93	52.273	ENSANAG00000030287	-	89	52.846	Aotus_nancymaae
ENSAMXG00000043011	srp19	83	56.667	ENSANAG00000029862	-	87	61.053	Aotus_nancymaae
ENSAMXG00000043011	srp19	90	69.531	ENSANAG00000032576	-	89	68.750	Aotus_nancymaae
ENSAMXG00000043011	srp19	94	78.947	ENSACLG00000006259	srp19	93	78.626	Astatotilapia_calliptera
ENSAMXG00000043011	srp19	90	69.531	ENSBTAG00000012803	SRP19	89	68.750	Bos_taurus
ENSAMXG00000043011	srp19	82	48.305	WBGene00018159	F37F2.2	89	46.875	Caenorhabditis_elegans
ENSAMXG00000043011	srp19	90	70.312	ENSCJAG00000038676	-	86	66.316	Callithrix_jacchus
ENSAMXG00000043011	srp19	86	52.500	ENSCJAG00000045531	-	78	52.459	Callithrix_jacchus
ENSAMXG00000043011	srp19	90	68.750	ENSCAFG00000031549	SRP19	88	68.504	Canis_familiaris
ENSAMXG00000043011	srp19	64	65.217	ENSCAFG00020004285	-	84	65.957	Canis_lupus_dingo
ENSAMXG00000043011	srp19	84	69.167	ENSCAFG00020022437	-	92	69.672	Canis_lupus_dingo
ENSAMXG00000043011	srp19	90	68.750	ENSCAFG00020014267	-	88	68.504	Canis_lupus_dingo
ENSAMXG00000043011	srp19	90	69.531	ENSCHIG00000017551	SRP19	89	68.750	Capra_hircus
ENSAMXG00000043011	srp19	90	69.531	ENSTSYG00000007875	SRP19	88	69.291	Carlito_syrichta
ENSAMXG00000043011	srp19	81	57.627	ENSCPOG00000036806	SRP19	89	57.627	Cavia_porcellus
ENSAMXG00000043011	srp19	90	69.531	ENSCCAG00000035651	-	89	68.750	Cebus_capucinus
ENSAMXG00000043011	srp19	86	54.098	ENSCCAG00000023426	-	80	54.098	Cebus_capucinus
ENSAMXG00000043011	srp19	86	52.893	ENSCCAG00000029821	-	61	52.893	Cebus_capucinus
ENSAMXG00000043011	srp19	90	65.079	ENSCATG00000039250	-	88	64.800	Cercocebus_atys
ENSAMXG00000043011	srp19	86	58.537	ENSCATG00000040513	-	77	59.200	Cercocebus_atys
ENSAMXG00000043011	srp19	90	69.531	ENSCLAG00000004791	-	88	69.291	Chinchilla_lanigera
ENSAMXG00000043011	srp19	90	64.062	ENSCLAG00000016055	-	88	63.780	Chinchilla_lanigera
ENSAMXG00000043011	srp19	90	69.531	ENSCHOG00000013452	SRP19	89	68.750	Choloepus_hoffmanni
ENSAMXG00000043011	srp19	96	63.971	ENSCPBG00000013903	SRP19	95	63.971	Chrysemys_picta_bellii
ENSAMXG00000043011	srp19	91	66.667	ENSCGRG00001020510	Srp19	89	66.406	Cricetulus_griseus_chok1gshd
ENSAMXG00000043011	srp19	67	64.000	ENSCGRG00000010716	-	87	63.636	Cricetulus_griseus_crigri
ENSAMXG00000043011	srp19	83	61.345	ENSCGRG00000008542	-	91	61.017	Cricetulus_griseus_crigri
ENSAMXG00000043011	srp19	94	78.195	ENSCSEG00000010039	srp19	93	77.863	Cynoglossus_semilaevis
ENSAMXG00000043011	srp19	94	82.707	ENSCVAG00000017621	srp19	93	82.443	Cyprinodon_variegatus
ENSAMXG00000043011	srp19	93	80.153	ENSDARG00000035699	srp19	93	80.153	Danio_rerio
ENSAMXG00000043011	srp19	90	69.531	ENSDNOG00000013856	SRP19	89	68.750	Dasypus_novemcinctus
ENSAMXG00000043011	srp19	67	67.708	ENSDORG00000004746	Srp19	75	67.368	Dipodomys_ordii
ENSAMXG00000043011	srp19	86	52.459	FBgn0015298	Srp19	75	52.459	Drosophila_melanogaster
ENSAMXG00000043011	srp19	91	67.692	ENSETEG00000017132	SRP19	89	67.969	Echinops_telfairi
ENSAMXG00000043011	srp19	90	68.504	ENSEBUG00000006613	srp19	93	67.939	Eptatretus_burgeri
ENSAMXG00000043011	srp19	90	70.312	ENSEASG00005015182	SRP19	88	70.079	Equus_asinus_asinus
ENSAMXG00000043011	srp19	90	69.531	ENSEEUG00000007298	SRP19	88	69.291	Erinaceus_europaeus
ENSAMXG00000043011	srp19	94	77.444	ENSELUG00000004594	srp19	93	77.099	Esox_lucius
ENSAMXG00000043011	srp19	93	80.916	ENSELUG00000007958	srp19	93	80.916	Esox_lucius
ENSAMXG00000043011	srp19	90	69.531	ENSFCAG00000025895	SRP19	88	69.291	Felis_catus
ENSAMXG00000043011	srp19	91	66.667	ENSFDAG00000013543	SRP19	89	66.406	Fukomys_damarensis
ENSAMXG00000043011	srp19	94	81.955	ENSFHEG00000000493	srp19	93	81.679	Fundulus_heteroclitus
ENSAMXG00000043011	srp19	85	78.333	ENSGMOG00000003264	srp19	92	77.966	Gadus_morhua
ENSAMXG00000043011	srp19	89	66.142	ENSGALG00000000218	SRP19	88	66.142	Gallus_gallus
ENSAMXG00000043011	srp19	88	82.400	ENSGAFG00000015815	srp19	59	82.114	Gambusia_affinis
ENSAMXG00000043011	srp19	94	79.699	ENSGACG00000001093	srp19	89	79.389	Gasterosteus_aculeatus
ENSAMXG00000043011	srp19	96	63.235	ENSGAGG00000025305	SRP19	95	63.235	Gopherus_agassizii
ENSAMXG00000043011	srp19	91	76.744	ENSHBUG00000006131	srp19	89	76.378	Haplochromis_burtoni
ENSAMXG00000043011	srp19	90	68.750	ENSHGLG00000006075	SRP19	89	67.969	Heterocephalus_glaber_female
ENSAMXG00000043011	srp19	90	68.750	ENSHGLG00100015859	SRP19	89	67.969	Heterocephalus_glaber_male
ENSAMXG00000043011	srp19	94	75.188	ENSHCOG00000013231	srp19	93	75.000	Hippocampus_comes
ENSAMXG00000043011	srp19	93	87.023	ENSIPUG00000025084	srp19	93	87.023	Ictalurus_punctatus
ENSAMXG00000043011	srp19	91	68.992	ENSSTOG00000000348	SRP19	89	68.750	Ictidomys_tridecemlineatus
ENSAMXG00000043011	srp19	90	68.750	ENSJJAG00000017185	Srp19	88	68.504	Jaculus_jaculus
ENSAMXG00000043011	srp19	94	82.707	ENSKMAG00000011155	srp19	93	82.443	Kryptolebias_marmoratus
ENSAMXG00000043011	srp19	94	83.459	ENSLBEG00000026727	srp19	93	83.206	Labrus_bergylta
ENSAMXG00000043011	srp19	94	69.403	ENSLACG00000004459	SRP19	87	69.403	Latimeria_chalumnae
ENSAMXG00000043011	srp19	93	76.336	ENSLOCG00000010302	srp19	93	76.336	Lepisosteus_oculatus
ENSAMXG00000043011	srp19	90	67.969	ENSLAFG00000002564	SRP19	89	67.188	Loxodonta_africana
ENSAMXG00000043011	srp19	83	52.586	ENSMFAG00000040055	-	89	53.390	Macaca_fascicularis
ENSAMXG00000043011	srp19	84	66.102	ENSMFAG00000000554	-	92	62.992	Macaca_fascicularis
ENSAMXG00000043011	srp19	84	66.949	ENSMMUG00000049186	-	92	63.780	Macaca_mulatta
ENSAMXG00000043011	srp19	86	57.724	ENSMMUG00000032515	-	92	58.400	Macaca_mulatta
ENSAMXG00000043011	srp19	91	67.692	ENSMNEG00000038714	SRP19	89	67.969	Macaca_nemestrina
ENSAMXG00000043011	srp19	83	51.724	ENSMNEG00000040117	-	89	52.542	Macaca_nemestrina
ENSAMXG00000043011	srp19	94	83.459	ENSMAMG00000018346	srp19	92	83.206	Mastacembelus_armatus
ENSAMXG00000043011	srp19	94	78.947	ENSMZEG00005001765	srp19	93	78.626	Maylandia_zebra
ENSAMXG00000043011	srp19	85	66.942	ENSMGAG00000006762	SRP19	92	66.942	Meleagris_gallopavo
ENSAMXG00000043011	srp19	68	59.794	ENSMICG00000049202	-	89	60.606	Microcebus_murinus
ENSAMXG00000043011	srp19	91	67.442	ENSMICG00000000399	SRP19	89	67.188	Microcebus_murinus
ENSAMXG00000043011	srp19	91	68.217	ENSMOCG00000006534	Srp19	88	68.504	Microtus_ochrogaster
ENSAMXG00000043011	srp19	67	66.667	ENSMOCG00000010532	-	87	66.316	Microtus_ochrogaster
ENSAMXG00000043011	srp19	85	83.333	ENSMMOG00000010417	srp19	77	83.051	Mola_mola
ENSAMXG00000043011	srp19	93	68.939	ENSMODG00000013278	SRP19	92	68.939	Monodelphis_domestica
ENSAMXG00000043011	srp19	94	84.211	ENSMALG00000003858	srp19	93	83.969	Monopterus_albus
ENSAMXG00000043011	srp19	91	69.231	MGP_CAROLIEiJ_G0022086	Srp19	89	69.531	Mus_caroli
ENSAMXG00000043011	srp19	91	69.231	ENSMUSG00000014504	Srp19	89	69.531	Mus_musculus
ENSAMXG00000043011	srp19	91	67.692	MGP_PahariEiJ_G0018820	Srp19	89	67.969	Mus_pahari
ENSAMXG00000043011	srp19	91	69.231	MGP_SPRETEiJ_G0022998	Srp19	89	69.531	Mus_spretus
ENSAMXG00000043011	srp19	90	70.312	ENSMPUG00000012695	SRP19	87	70.079	Mustela_putorius_furo
ENSAMXG00000043011	srp19	91	67.442	ENSMLUG00000014793	-	88	67.717	Myotis_lucifugus
ENSAMXG00000043011	srp19	87	64.516	ENSMLUG00000024549	-	89	64.516	Myotis_lucifugus
ENSAMXG00000043011	srp19	87	62.097	ENSNGAG00000014524	-	95	62.097	Nannospalax_galili
ENSAMXG00000043011	srp19	91	66.667	ENSNGAG00000003440	-	88	66.929	Nannospalax_galili
ENSAMXG00000043011	srp19	89	59.843	ENSNLEG00000035364	-	89	61.856	Nomascus_leucogenys
ENSAMXG00000043011	srp19	83	70.588	ENSMEUG00000012529	SRP19	92	70.588	Notamacropus_eugenii
ENSAMXG00000043011	srp19	82	68.376	ENSOPRG00000010549	SRP19	92	68.067	Ochotona_princeps
ENSAMXG00000043011	srp19	88	64.800	ENSODEG00000019119	-	89	64.062	Octodon_degus
ENSAMXG00000043011	srp19	67	67.708	ENSODEG00000005538	-	83	67.368	Octodon_degus
ENSAMXG00000043011	srp19	86	59.504	ENSODEG00000013862	-	86	60.163	Octodon_degus
ENSAMXG00000043011	srp19	94	78.195	ENSONIG00000000542	srp19	93	77.863	Oreochromis_niloticus
ENSAMXG00000043011	srp19	93	65.909	ENSOANG00000011139	SRP19	76	65.909	Ornithorhynchus_anatinus
ENSAMXG00000043011	srp19	91	66.923	ENSOCUG00000015639	SRP19	89	66.667	Oryctolagus_cuniculus
ENSAMXG00000043011	srp19	94	80.451	ENSORLG00000028267	srp19	94	80.153	Oryzias_latipes
ENSAMXG00000043011	srp19	94	80.451	ENSORLG00020015201	srp19	94	80.153	Oryzias_latipes_hni
ENSAMXG00000043011	srp19	94	80.451	ENSORLG00015007525	srp19	94	80.153	Oryzias_latipes_hsok
ENSAMXG00000043011	srp19	94	79.699	ENSOMEG00000009178	srp19	94	79.389	Oryzias_melastigma
ENSAMXG00000043011	srp19	91	68.217	ENSOGAG00000008579	SRP19	89	67.969	Otolemur_garnettii
ENSAMXG00000043011	srp19	91	68.217	ENSOARG00000016066	SRP19	89	67.969	Ovis_aries
ENSAMXG00000043011	srp19	91	68.217	ENSPPAG00000037062	SRP19	88	68.504	Pan_paniscus
ENSAMXG00000043011	srp19	90	69.531	ENSPPRG00000015591	SRP19	88	69.291	Panthera_pardus
ENSAMXG00000043011	srp19	90	69.531	ENSPTIG00000021474	SRP19	88	69.291	Panthera_tigris_altaica
ENSAMXG00000043011	srp19	91	68.217	ENSPTRG00000017136	SRP19	88	68.504	Pan_troglodytes
ENSAMXG00000043011	srp19	91	67.692	ENSPANG00000004370	-	89	67.969	Papio_anubis
ENSAMXG00000043011	srp19	91	63.780	ENSPANG00000034740	-	88	64.000	Papio_anubis
ENSAMXG00000043011	srp19	94	76.692	ENSPKIG00000018671	srp19	93	76.336	Paramormyrops_kingsleyae
ENSAMXG00000043011	srp19	87	65.323	ENSPSIG00000013811	SRP19	95	65.323	Pelodiscus_sinensis
ENSAMXG00000043011	srp19	94	78.195	ENSPMGG00000015313	srp19	93	77.863	Periophthalmus_magnuspinnatus
ENSAMXG00000043011	srp19	86	69.672	ENSPEMG00000004412	-	88	70.000	Peromyscus_maniculatus_bairdii
ENSAMXG00000043011	srp19	95	61.194	ENSPMAG00000002685	srp19	93	62.595	Petromyzon_marinus
ENSAMXG00000043011	srp19	93	68.939	ENSPCIG00000010250	SRP19	92	68.939	Phascolarctos_cinereus
ENSAMXG00000043011	srp19	94	83.459	ENSPFOG00000015887	srp19	93	83.206	Poecilia_formosa
ENSAMXG00000043011	srp19	94	83.459	ENSPLAG00000007784	srp19	93	83.206	Poecilia_latipinna
ENSAMXG00000043011	srp19	94	84.211	ENSPMEG00000003056	srp19	93	83.969	Poecilia_mexicana
ENSAMXG00000043011	srp19	94	83.459	ENSPREG00000017307	srp19	92	83.206	Poecilia_reticulata
ENSAMXG00000043011	srp19	91	68.217	ENSPPYG00000029584	SRP19	88	67.969	Pongo_abelii
ENSAMXG00000043011	srp19	66	65.263	ENSPCAG00000000228	SRP19	65	64.894	Procavia_capensis
ENSAMXG00000043011	srp19	91	68.217	ENSPCOG00000023239	SRP19	88	68.504	Propithecus_coquereli
ENSAMXG00000043011	srp19	90	68.750	ENSPVAG00000004895	SRP19	89	67.969	Pteropus_vampyrus
ENSAMXG00000043011	srp19	93	84.848	ENSPNAG00000009392	srp19	93	84.848	Pygocentrus_nattereri
ENSAMXG00000043011	srp19	91	68.462	ENSRNOG00000020204	Srp19	89	68.750	Rattus_norvegicus
ENSAMXG00000043011	srp19	89	64.516	ENSRBIG00000040440	-	87	64.516	Rhinopithecus_bieti
ENSAMXG00000043011	srp19	51	63.514	ENSRBIG00000031651	-	82	63.514	Rhinopithecus_bieti
ENSAMXG00000043011	srp19	91	67.692	ENSRBIG00000015627	-	89	67.969	Rhinopithecus_bieti
ENSAMXG00000043011	srp19	86	56.098	ENSRROG00000037316	-	90	56.667	Rhinopithecus_roxellana
ENSAMXG00000043011	srp19	89	64.516	ENSRROG00000037054	-	88	64.516	Rhinopithecus_roxellana
ENSAMXG00000043011	srp19	90	69.531	ENSSBOG00000028071	-	89	68.750	Saimiri_boliviensis_boliviensis
ENSAMXG00000043011	srp19	91	50.388	ENSSBOG00000032685	-	84	56.383	Saimiri_boliviensis_boliviensis
ENSAMXG00000043011	srp19	94	78.947	ENSSFOG00015022139	srp19	93	78.626	Scleropages_formosus
ENSAMXG00000043011	srp19	94	78.947	ENSSMAG00000016803	srp19	92	78.626	Scophthalmus_maximus
ENSAMXG00000043011	srp19	94	72.222	ENSSDUG00000012930	srp19	93	71.831	Seriola_dumerili
ENSAMXG00000043011	srp19	70	60.396	ENSSLDG00000021916	-	74	61.290	Seriola_lalandi_dorsalis
ENSAMXG00000043011	srp19	90	67.969	ENSSARG00000000615	SRP19	88	67.717	Sorex_araneus
ENSAMXG00000043011	srp19	87	67.742	ENSSPUG00000015769	SRP19	91	65.909	Sphenodon_punctatus
ENSAMXG00000043011	srp19	90	69.531	ENSSSCG00000026230	SRP19	89	68.750	Sus_scrofa
ENSAMXG00000043011	srp19	87	66.129	ENSTGUG00000001019	SRP19	87	66.142	Taeniopygia_guttata
ENSAMXG00000043011	srp19	94	78.832	ENSTRUG00000023119	srp19	93	78.519	Takifugu_rubripes
ENSAMXG00000043011	srp19	94	80.451	ENSTNIG00000018880	srp19	93	80.153	Tetraodon_nigroviridis
ENSAMXG00000043011	srp19	90	68.750	ENSTTRG00000001690	SRP19	89	67.969	Tursiops_truncatus
ENSAMXG00000043011	srp19	88	69.600	ENSUAMG00000000111	SRP19	88	70.079	Ursus_americanus
ENSAMXG00000043011	srp19	90	70.312	ENSUMAG00000016997	SRP19	88	70.079	Ursus_maritimus
ENSAMXG00000043011	srp19	90	70.312	ENSVPAG00000006001	SRP19	88	70.079	Vicugna_pacos
ENSAMXG00000043011	srp19	67	67.708	ENSVVUG00000012423	SRP19	86	71.642	Vulpes_vulpes
ENSAMXG00000043011	srp19	86	68.852	ENSXETG00000011993	srp19	85	68.333	Xenopus_tropicalis
ENSAMXG00000043011	srp19	84	72.269	ENSXCOG00000012530	srp19	83	72.269	Xiphophorus_couchianus
ENSAMXG00000043011	srp19	94	84.211	ENSXMAG00000029788	srp19	93	83.969	Xiphophorus_maculatus