EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000043150 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1530 bases
Position: chrAPWO02000055.1:73639-75168
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029581	RVT_1	PF00078.27	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052228	-	1530	-	ENSAMXP00000029581	456 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000043150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043150	-	91	38.095	ENSACLG00000013994	-	70	38.095	Astatotilapia_calliptera
ENSAMXG00000043150	-	99	34.990	ENSDARG00000098557	BX323564.1	50	34.783	Danio_rerio
ENSAMXG00000043150	-	100	36.157	ENSDARG00000100538	si:dkeyp-88h4.2	61	35.950	Danio_rerio
ENSAMXG00000043150	-	75	46.334	ENSHBUG00000009853	-	96	46.334	Haplochromis_burtoni
ENSAMXG00000043150	-	78	39.888	ENSKMAG00000001475	-	63	39.888	Kryptolebias_marmoratus
ENSAMXG00000043150	-	100	38.017	ENSKMAG00000018235	-	51	38.017	Kryptolebias_marmoratus
ENSAMXG00000043150	-	91	35.388	ENSMZEG00005001249	-	63	35.160	Maylandia_zebra
ENSAMXG00000043150	-	52	42.194	ENSONIG00000020426	-	65	42.194	Oreochromis_niloticus
ENSAMXG00000043150	-	100	37.654	ENSORLG00000028041	-	50	37.654	Oryzias_latipes
ENSAMXG00000043150	-	73	45.833	ENSORLG00000022221	-	87	45.833	Oryzias_latipes
ENSAMXG00000043150	-	73	47.619	ENSORLG00000023710	-	60	47.917	Oryzias_latipes
ENSAMXG00000043150	-	77	45.714	ENSORLG00020004920	-	51	46.000	Oryzias_latipes_hni
ENSAMXG00000043150	-	100	40.083	ENSORLG00020006818	-	53	40.083	Oryzias_latipes_hni
ENSAMXG00000043150	-	73	46.269	ENSORLG00020009704	-	54	45.672	Oryzias_latipes_hni
ENSAMXG00000043150	-	100	40.496	ENSORLG00020021090	-	53	40.496	Oryzias_latipes_hni
ENSAMXG00000043150	-	99	40.211	ENSORLG00020007503	-	70	40.211	Oryzias_latipes_hni
ENSAMXG00000043150	-	100	40.166	ENSORLG00020010329	-	73	40.373	Oryzias_latipes_hni
ENSAMXG00000043150	-	76	39.143	ENSORLG00015001172	-	53	38.571	Oryzias_latipes_hsok
ENSAMXG00000043150	-	99	37.137	ENSORLG00015007293	-	63	37.137	Oryzias_latipes_hsok
ENSAMXG00000043150	-	100	40.373	ENSOMEG00000003087	-	72	40.580	Oryzias_melastigma
ENSAMXG00000043150	-	96	39.362	ENSPMEG00000007764	-	75	39.362	Poecilia_mexicana
ENSAMXG00000043150	-	99	39.463	ENSXMAG00000022515	-	50	39.463	Xiphophorus_maculatus