EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000043329 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
11208 bases
Position
chr19:22494405-22505612
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000044626PARPPF00644.201.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000044206-2013-ENSAMXP00000044626670 (aa)--
Gene Model
Click here to download ENSAMXG00000043329's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043329's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000043329-9837.430ENSAMXG00000010091-9937.570
ENSAMXG00000043329-5538.191ENSAMXG00000031328-9638.191
ENSAMXG00000043329-10092.373ENSAMXG00000031852-10092.373
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000043329-9937.712ENSG00000173193PARP145537.712Homo_sapiens
ENSAMXG00000043329-9946.722ENSAPOG00000006513si:ch211-219a4.36347.001Acanthochromis_polyacanthus
ENSAMXG00000043329-10037.027ENSAMEG00000004862PARP145537.027Ailuropoda_melanoleuca
ENSAMXG00000043329-9945.646ENSACIG00000004115si:ch211-219a4.39743.114Amphilophus_citrinellus
ENSAMXG00000043329-9947.679ENSACIG00000003944si:ch211-219a4.39953.933Amphilophus_citrinellus
ENSAMXG00000043329-9945.352ENSACIG00000004252si:ch211-219a4.39955.932Amphilophus_citrinellus
ENSAMXG00000043329-6138.071ENSAOCG00000017389-8838.071Amphiprion_ocellaris
ENSAMXG00000043329-9947.559ENSAOCG00000012848si:ch211-219a4.36047.699Amphiprion_ocellaris
ENSAMXG00000043329-9831.765ENSAPEG00000001687-9437.563Amphiprion_percula
ENSAMXG00000043329-9947.420ENSAPEG00000006205si:ch211-219a4.36047.559Amphiprion_percula
ENSAMXG00000043329-9947.679ENSATEG00000010770si:ch211-219a4.35647.961Anabas_testudineus
ENSAMXG00000043329-10036.944ENSAPLG00000010410-5637.361Anas_platyrhynchos
ENSAMXG00000043329-9939.776ENSAPLG00000010062-6039.776Anas_platyrhynchos
ENSAMXG00000043329-9937.465ENSACAG00000009769-5537.465Anolis_carolinensis
ENSAMXG00000043329-7138.048ENSACAG00000009741-9938.048Anolis_carolinensis
ENSAMXG00000043329-9938.440ENSANAG00000030799PARP145538.440Aotus_nancymaae
ENSAMXG00000043329-9947.673ENSACLG00000005450si:ch211-219a4.35147.955Astatotilapia_calliptera
ENSAMXG00000043329-8743.655ENSACLG00000005418-9943.705Astatotilapia_calliptera
ENSAMXG00000043329-9931.241ENSACLG00000001129-5741.830Astatotilapia_calliptera
ENSAMXG00000043329-9937.307ENSBTAG00000016656PARP145243.434Bos_taurus
ENSAMXG00000043329-9938.202ENSCJAG00000007930PARP145538.202Callithrix_jacchus
ENSAMXG00000043329-9937.606ENSCAFG00000011970PARP145037.606Canis_familiaris
ENSAMXG00000043329-9937.800ENSCAFG00020005495PARP145037.659Canis_lupus_dingo
ENSAMXG00000043329-9936.886ENSCHIG00000018391PARP145636.886Capra_hircus
ENSAMXG00000043329-9938.646ENSTSYG00000005576PARP145638.646Carlito_syrichta
ENSAMXG00000043329-9938.062ENSCAPG00000016922PARP146038.062Cavia_aperea
ENSAMXG00000043329-9938.095ENSCPOG00000020020PARP146038.095Cavia_porcellus
ENSAMXG00000043329-9938.202ENSCCAG00000028961PARP145838.202Cebus_capucinus
ENSAMXG00000043329-9937.429ENSCATG00000033839PARP145537.429Cercocebus_atys
ENSAMXG00000043329-10037.500ENSCLAG00000009862PARP145637.500Chinchilla_lanigera
ENSAMXG00000043329-9937.288ENSCSAG00000007464PARP145537.288Chlorocebus_sabaeus
ENSAMXG00000043329-9934.459ENSCHOG00000010569PARP145134.459Choloepus_hoffmanni
ENSAMXG00000043329-9940.499ENSCPBG00000013912-5540.499Chrysemys_picta_bellii
ENSAMXG00000043329-9939.407ENSCPBG00000013908-5839.407Chrysemys_picta_bellii
ENSAMXG00000043329-9938.277ENSCANG00000040574PARP145538.277Colobus_angolensis_palliatus
ENSAMXG00000043329-9937.465ENSCGRG00001006699Parp145637.465Cricetulus_griseus_chok1gshd
ENSAMXG00000043329-9937.465ENSCGRG00000014558Parp145637.465Cricetulus_griseus_crigri
ENSAMXG00000043329-9942.135ENSCSEG00000017936si:ch211-219a4.38759.843Cynoglossus_semilaevis
ENSAMXG00000043329-9948.310ENSCVAG00000008369si:ch211-219a4.36048.451Cyprinodon_variegatus
ENSAMXG00000043329-9931.224ENSCVAG00000017536-5431.224Cyprinodon_variegatus
ENSAMXG00000043329-10059.218ENSDARG00000040445si:ch211-219a4.310059.218Danio_rerio
ENSAMXG00000043329-10037.236ENSDNOG00000015400PARP145637.236Dasypus_novemcinctus
ENSAMXG00000043329-9937.079ENSDORG00000000690Parp145637.079Dipodomys_ordii
ENSAMXG00000043329-10048.000ENSETEG00000002790PARP145648.000Echinops_telfairi
ENSAMXG00000043329-5046.053ENSEBUG00000000526-6246.053Eptatretus_burgeri
ENSAMXG00000043329-6139.831ENSEBUG00000002611-6637.313Eptatretus_burgeri
ENSAMXG00000043329-9937.571ENSEASG00005016553PARP145637.571Equus_asinus_asinus
ENSAMXG00000043329-9937.571ENSECAG00000024988PARP145637.571Equus_caballus
ENSAMXG00000043329-9937.027ENSEEUG00000002136PARP146437.027Erinaceus_europaeus
ENSAMXG00000043329-9953.571ENSELUG00000009798si:ch211-219a4.35853.571Esox_lucius
ENSAMXG00000043329-10037.693ENSFCAG00000000930PARP145637.693Felis_catus
ENSAMXG00000043329-9937.255ENSFALG00000013545-5837.255Ficedula_albicollis
ENSAMXG00000043329-9938.755ENSFALG00000013541-5538.755Ficedula_albicollis
ENSAMXG00000043329-9938.451ENSFDAG00000008689PARP145638.451Fukomys_damarensis
ENSAMXG00000043329-8848.197ENSFHEG00000007383si:ch211-219a4.35348.197Fundulus_heteroclitus
ENSAMXG00000043329-8631.179ENSFHEG00000008557-9931.179Fundulus_heteroclitus
ENSAMXG00000043329-9943.059ENSGMOG00000008501-6643.059Gadus_morhua
ENSAMXG00000043329-9935.583ENSGMOG00000011231-9939.726Gadus_morhua
ENSAMXG00000043329-9942.797ENSGMOG00000009701-5442.797Gadus_morhua
ENSAMXG00000043329-9938.169ENSGALG00000012072-5738.169Gallus_gallus
ENSAMXG00000043329-9937.271ENSGALG00000026422-6137.307Gallus_gallus
ENSAMXG00000043329-9947.436ENSGAFG00000009879si:ch211-219a4.39947.293Gambusia_affinis
ENSAMXG00000043329-5038.071ENSGAFG00000001802-7438.071Gambusia_affinis
ENSAMXG00000043329-5338.863ENSGAFG00000001814-10038.863Gambusia_affinis
ENSAMXG00000043329-9945.698ENSGACG00000002353si:ch211-219a4.39751.379Gasterosteus_aculeatus
ENSAMXG00000043329-9940.225ENSGAGG00000000808-6440.225Gopherus_agassizii
ENSAMXG00000043329-9139.158ENSGAGG00000017725-5639.158Gopherus_agassizii
ENSAMXG00000043329-9937.994ENSGGOG00000001623PARP145537.994Gorilla_gorilla
ENSAMXG00000043329-6945.697ENSHBUG00000005337-9745.697Haplochromis_burtoni
ENSAMXG00000043329-9931.241ENSHBUG00000018235-6440.541Haplochromis_burtoni
ENSAMXG00000043329-9938.819ENSHGLG00000001930PARP145639.100Heterocephalus_glaber_female
ENSAMXG00000043329-9938.819ENSHGLG00100018459PARP145539.100Heterocephalus_glaber_male
ENSAMXG00000043329-10064.557ENSIPUG00000003936si:ch211-219a4.35964.557Ictalurus_punctatus
ENSAMXG00000043329-9938.048ENSSTOG00000019423PARP145638.048Ictidomys_tridecemlineatus
ENSAMXG00000043329-8532.635ENSKMAG00000016827-5738.265Kryptolebias_marmoratus
ENSAMXG00000043329-9947.034ENSKMAG00000019118si:ch211-219a4.35647.034Kryptolebias_marmoratus
ENSAMXG00000043329-9946.761ENSLBEG00000025830si:ch211-219a4.36246.761Labrus_bergylta
ENSAMXG00000043329-8631.856ENSLBEG00000016023-8031.856Labrus_bergylta
ENSAMXG00000043329-9941.702ENSLACG00000012073PARP145541.702Latimeria_chalumnae
ENSAMXG00000043329-8631.856ENSLACG00000001018-9931.856Latimeria_chalumnae
ENSAMXG00000043329-9946.208ENSLOCG00000003430si:ch211-219a4.35746.208Lepisosteus_oculatus
ENSAMXG00000043329-10044.938ENSLOCG00000003463-5644.938Lepisosteus_oculatus
ENSAMXG00000043329-9930.737ENSLOCG00000001612-5230.737Lepisosteus_oculatus
ENSAMXG00000043329-10036.835ENSLAFG00000021607PARP145836.835Loxodonta_africana
ENSAMXG00000043329-9937.288ENSMFAG00000038097PARP145537.288Macaca_fascicularis
ENSAMXG00000043329-9937.288ENSMMUG00000022569PARP145537.288Macaca_mulatta
ENSAMXG00000043329-9937.288ENSMNEG00000035861PARP145537.288Macaca_nemestrina
ENSAMXG00000043329-9937.429ENSMLEG00000041852PARP145537.429Mandrillus_leucophaeus
ENSAMXG00000043329-9830.769ENSMAMG00000012368-5430.769Mastacembelus_armatus
ENSAMXG00000043329-9948.603ENSMAMG00000012417si:ch211-219a4.35749.506Mastacembelus_armatus
ENSAMXG00000043329-9947.034ENSMZEG00005025678si:ch211-219a4.39954.967Maylandia_zebra
ENSAMXG00000043329-6051.316ENSMZEG00005025708-8151.316Maylandia_zebra
ENSAMXG00000043329-9947.673ENSMZEG00005016195si:ch211-219a4.35147.955Maylandia_zebra
ENSAMXG00000043329-9931.241ENSMZEG00005020476-6331.429Maylandia_zebra
ENSAMXG00000043329-7336.538ENSMGAG00000016901-10036.538Meleagris_gallopavo
ENSAMXG00000043329-9936.389ENSMGAG00000012246-5936.389Meleagris_gallopavo
ENSAMXG00000043329-9938.298ENSMICG00000049225PARP145438.298Microcebus_murinus
ENSAMXG00000043329-9937.183ENSMOCG00000021121Parp145237.183Microtus_ochrogaster
ENSAMXG00000043329-9146.541ENSMMOG00000005277-9946.541Mola_mola
ENSAMXG00000043329-9145.912ENSMMOG00000005282-9945.912Mola_mola
ENSAMXG00000043329-9938.215ENSMODG00000018318-5838.215Monodelphis_domestica
ENSAMXG00000043329-9233.384ENSMODG00000018308-5333.384Monodelphis_domestica
ENSAMXG00000043329-9936.338MGP_CAROLIEiJ_G0020706Parp145536.338Mus_caroli
ENSAMXG00000043329-9935.994ENSMUSG00000034422Parp145535.994Mus_musculus
ENSAMXG00000043329-9935.714MGP_PahariEiJ_G0016409Parp145535.714Mus_pahari
ENSAMXG00000043329-9935.714MGP_SPRETEiJ_G0021604Parp145535.714Mus_spretus
ENSAMXG00000043329-10037.553ENSMPUG00000004629PARP145537.553Mustela_putorius_furo
ENSAMXG00000043329-9938.569ENSMLUG00000030765-5638.569Myotis_lucifugus
ENSAMXG00000043329-9938.732ENSMLUG00000022755-6538.732Myotis_lucifugus
ENSAMXG00000043329-6336.807ENSMLUG00000027718-9936.807Myotis_lucifugus
ENSAMXG00000043329-9937.606ENSMLUG00000023256-5637.887Myotis_lucifugus
ENSAMXG00000043329-9937.853ENSMLUG00000008047-6037.853Myotis_lucifugus
ENSAMXG00000043329-9938.277ENSNLEG00000000311PARP145738.277Nomascus_leucogenys
ENSAMXG00000043329-9932.153ENSMEUG00000003239-5932.153Notamacropus_eugenii
ENSAMXG00000043329-9939.045ENSODEG00000008430PARP145539.045Octodon_degus
ENSAMXG00000043329-9947.881ENSONIG00000004515si:ch211-219a4.35347.881Oreochromis_niloticus
ENSAMXG00000043329-6451.439ENSONIG00000004517-9751.439Oreochromis_niloticus
ENSAMXG00000043329-9931.044ENSONIG00000007870-9231.362Oreochromis_niloticus
ENSAMXG00000043329-9336.882ENSOCUG00000003418PARP145536.882Oryctolagus_cuniculus
ENSAMXG00000043329-9545.858ENSORLG00000008781-9946.154Oryzias_latipes
ENSAMXG00000043329-9947.525ENSORLG00015021971si:ch211-219a4.39360.305Oryzias_latipes_hsok
ENSAMXG00000043329-9944.663ENSOMEG00000019715si:ch211-219a4.39461.832Oryzias_melastigma
ENSAMXG00000043329-9931.333ENSOMEG00000022143-6331.333Oryzias_melastigma
ENSAMXG00000043329-9936.746ENSOARG00000020160PARP145636.746Ovis_aries
ENSAMXG00000043329-9938.136ENSPPAG00000039852PARP145538.136Pan_paniscus
ENSAMXG00000043329-10037.834ENSPPRG00000002799PARP145637.834Panthera_pardus
ENSAMXG00000043329-10037.975ENSPTIG00000011462PARP145637.975Panthera_tigris_altaica
ENSAMXG00000043329-9937.994ENSPTRG00000015297PARP146237.994Pan_troglodytes
ENSAMXG00000043329-9937.147ENSPANG00000000522PARP145537.147Papio_anubis
ENSAMXG00000043329-9841.690ENSPKIG00000004027-9941.690Paramormyrops_kingsleyae
ENSAMXG00000043329-5038.827ENSPKIG00000004135-9938.827Paramormyrops_kingsleyae
ENSAMXG00000043329-9940.222ENSPSIG00000003516PARP145840.222Pelodiscus_sinensis
ENSAMXG00000043329-7240.945ENSPMGG00000007159-9841.142Periophthalmus_magnuspinnatus
ENSAMXG00000043329-9937.341ENSPEMG00000008286Parp145637.341Peromyscus_maniculatus_bairdii
ENSAMXG00000043329-10030.201ENSPMAG00000008302-6330.969Petromyzon_marinus
ENSAMXG00000043329-6433.831ENSPMAG00000008296-9633.831Petromyzon_marinus
ENSAMXG00000043329-5447.287ENSPFOG00000021893-9947.287Poecilia_formosa
ENSAMXG00000043329-9947.612ENSPFOG00000016743si:ch211-219a4.39942.424Poecilia_formosa
ENSAMXG00000043329-9831.198ENSPFOG00000000012-9831.198Poecilia_formosa
ENSAMXG00000043329-6336.548ENSPFOG00000023812-6436.548Poecilia_formosa
ENSAMXG00000043329-9948.242ENSPLAG00000023145si:ch211-219a4.35948.383Poecilia_latipinna
ENSAMXG00000043329-9948.383ENSPMEG00000000483si:ch211-219a4.35848.523Poecilia_mexicana
ENSAMXG00000043329-9830.899ENSPMEG00000004328-5330.899Poecilia_mexicana
ENSAMXG00000043329-10030.968ENSPREG00000007508-5539.674Poecilia_reticulata
ENSAMXG00000043329-9745.389ENSPREG00000019242-9960.000Poecilia_reticulata
ENSAMXG00000043329-8660.494ENSPREG00000019182-8060.494Poecilia_reticulata
ENSAMXG00000043329-9938.559ENSPPYG00000013479PARP146538.559Pongo_abelii
ENSAMXG00000043329-9938.136ENSPCOG00000007904PARP145638.136Propithecus_coquereli
ENSAMXG00000043329-9935.754ENSPVAG00000012722PARP146335.754Pteropus_vampyrus
ENSAMXG00000043329-9946.893ENSPNYG00000013937-9954.967Pundamilia_nyererei
ENSAMXG00000043329-6450.534ENSPNYG00000001714-9160.305Pundamilia_nyererei
ENSAMXG00000043329-9946.910ENSPNYG00000001481si:ch211-219a4.36446.695Pundamilia_nyererei
ENSAMXG00000043329-10073.455ENSPNAG00000028188si:ch211-219a4.36273.455Pygocentrus_nattereri
ENSAMXG00000043329-9936.620ENSRNOG00000023334Parp145636.620Rattus_norvegicus
ENSAMXG00000043329-9938.559ENSRBIG00000042403PARP145538.559Rhinopithecus_bieti
ENSAMXG00000043329-9938.559ENSRROG00000042264PARP145538.559Rhinopithecus_roxellana
ENSAMXG00000043329-9938.136ENSSBOG00000032798PARP145538.136Saimiri_boliviensis_boliviensis
ENSAMXG00000043329-9936.158ENSSHAG00000002478PARP145636.158Sarcophilus_harrisii
ENSAMXG00000043329-5237.755ENSSFOG00015012828-7937.755Scleropages_formosus
ENSAMXG00000043329-9946.463ENSSFOG00015022852si:ch211-219a4.35546.741Scleropages_formosus
ENSAMXG00000043329-9938.343ENSSFOG00015001605-9938.450Scleropages_formosus
ENSAMXG00000043329-9946.403ENSSMAG00000003869si:ch211-219a4.35746.403Scophthalmus_maximus
ENSAMXG00000043329-9949.086ENSSDUG00000009289si:ch211-219a4.35749.367Seriola_dumerili
ENSAMXG00000043329-9949.367ENSSLDG00000020946si:ch211-219a4.35749.648Seriola_lalandi_dorsalis
ENSAMXG00000043329-6139.796ENSSLDG00000005702-9139.796Seriola_lalandi_dorsalis
ENSAMXG00000043329-9941.259ENSSARG00000011299PARP145741.259Sorex_araneus
ENSAMXG00000043329-10040.000ENSSPUG00000016288-6140.000Sphenodon_punctatus
ENSAMXG00000043329-9938.364ENSSPUG00000016301-6138.364Sphenodon_punctatus
ENSAMXG00000043329-9544.541ENSSPAG00000009605si:ch211-219a4.35045.058Stegastes_partitus
ENSAMXG00000043329-9936.686ENSSSCG00000011874PARP145036.544Sus_scrofa
ENSAMXG00000043329-9937.762ENSTGUG00000003925PARP146637.762Taeniopygia_guttata
ENSAMXG00000043329-9943.404ENSTRUG00000004579-9458.915Takifugu_rubripes
ENSAMXG00000043329-6343.243ENSTRUG00000004556-9943.243Takifugu_rubripes
ENSAMXG00000043329-6344.776ENSTNIG00000008883-9044.776Tetraodon_nigroviridis
ENSAMXG00000043329-10036.990ENSUMAG00000025217PARP145536.990Ursus_maritimus
ENSAMXG00000043329-9937.518ENSVVUG00000022533PARP145037.518Vulpes_vulpes
ENSAMXG00000043329-10039.691ENSXETG00000023399parp14.25639.411Xenopus_tropicalis
ENSAMXG00000043329-10037.902ENSXETG00000023401-6737.902Xenopus_tropicalis
ENSAMXG00000043329-5934.426ENSXCOG00000006581-7734.426Xiphophorus_couchianus
ENSAMXG00000043329-9748.052ENSXCOG00000014707-9461.364Xiphophorus_couchianus
ENSAMXG00000043329-9947.339ENSXMAG00000026958si:ch211-219a4.35647.339Xiphophorus_maculatus
ENSAMXG00000043329-6437.056ENSXMAG00000024189-6637.056Xiphophorus_maculatus
ENSAMXG00000043329-9946.910ENSXMAG00000026293-5746.910Xiphophorus_maculatus
ENSAMXG00000043329-9948.945ENSXMAG00000007367si:ch211-219a4.36049.086Xiphophorus_maculatus

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