EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000043423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1341 bases
Position: chrAPWO02001270.1:231767-233107
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	1	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	2	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	3	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	4	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	5	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	6	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	7	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	8	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	9	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	10	11
ENSAMXP00000026701	zf-C2H2	PF00096.26	8.4e-69	11	11
ENSAMXP00000026701	zf-met	PF12874.7	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000026722	-	1341	-	ENSAMXP00000026701	446 (aa)	-	W5LU85

Gene Model

Click here to download ENSAMXG00000043423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000043423	-	81	75.082	ENSAMXG00000024978	-	92	76.435
ENSAMXG00000043423	-	79	49.367	ENSAMXG00000035127	-	89	49.804
ENSAMXG00000043423	-	76	36.937	ENSAMXG00000039622	zbtb41	51	36.937
ENSAMXG00000043423	-	81	42.929	ENSAMXG00000033299	-	72	42.929
ENSAMXG00000043423	-	78	74.859	ENSAMXG00000039977	-	95	74.859
ENSAMXG00000043423	-	73	45.963	ENSAMXG00000044096	-	79	45.963
ENSAMXG00000043423	-	76	65.320	ENSAMXG00000030530	-	99	70.859
ENSAMXG00000043423	-	72	65.944	ENSAMXG00000038324	-	75	65.944
ENSAMXG00000043423	-	81	59.821	ENSAMXG00000038325	-	99	59.821
ENSAMXG00000043423	-	78	65.732	ENSAMXG00000039752	-	94	65.732
ENSAMXG00000043423	-	78	65.909	ENSAMXG00000029109	-	87	65.909
ENSAMXG00000043423	-	74	69.032	ENSAMXG00000009776	-	85	69.032
ENSAMXG00000043423	-	80	54.404	ENSAMXG00000026143	-	99	59.347
ENSAMXG00000043423	-	83	64.784	ENSAMXG00000026142	-	98	65.763
ENSAMXG00000043423	-	76	39.130	ENSAMXG00000038085	scrt1a	51	39.130
ENSAMXG00000043423	-	84	63.226	ENSAMXG00000037717	-	98	63.226
ENSAMXG00000043423	-	78	41.333	ENSAMXG00000025761	-	89	38.133
ENSAMXG00000043423	-	74	74.766	ENSAMXG00000038636	-	98	75.000
ENSAMXG00000043423	-	74	70.064	ENSAMXG00000039004	-	88	70.064
ENSAMXG00000043423	-	77	41.935	ENSAMXG00000033001	-	59	41.935
ENSAMXG00000043423	-	76	58.498	ENSAMXG00000036257	-	92	58.498
ENSAMXG00000043423	-	74	72.107	ENSAMXG00000008613	-	96	72.107
ENSAMXG00000043423	-	81	63.559	ENSAMXG00000009563	-	99	63.559
ENSAMXG00000043423	-	84	73.077	ENSAMXG00000031009	-	94	73.077
ENSAMXG00000043423	-	80	73.464	ENSAMXG00000034958	-	96	73.464
ENSAMXG00000043423	-	79	73.088	ENSAMXG00000025452	-	99	73.088
ENSAMXG00000043423	-	74	75.556	ENSAMXG00000025455	-	98	75.556
ENSAMXG00000043423	-	75	69.048	ENSAMXG00000029828	-	98	69.048
ENSAMXG00000043423	-	80	61.056	ENSAMXG00000013274	-	97	61.056
ENSAMXG00000043423	-	80	66.507	ENSAMXG00000032841	-	85	66.507
ENSAMXG00000043423	-	82	68.536	ENSAMXG00000038453	-	86	68.536
ENSAMXG00000043423	-	82	59.574	ENSAMXG00000038905	-	99	59.574
ENSAMXG00000043423	-	72	75.085	ENSAMXG00000011804	-	92	75.085
ENSAMXG00000043423	-	80	70.448	ENSAMXG00000041609	-	99	70.448
ENSAMXG00000043423	-	74	75.529	ENSAMXG00000018161	-	95	75.529
ENSAMXG00000043423	-	78	67.376	ENSAMXG00000037326	-	92	67.376
ENSAMXG00000043423	-	50	37.607	ENSAMXG00000044034	-	76	33.670
ENSAMXG00000043423	-	84	69.551	ENSAMXG00000042275	-	99	69.551
ENSAMXG00000043423	-	81	60.933	ENSAMXG00000035875	-	99	60.933
ENSAMXG00000043423	-	74	44.375	ENSAMXG00000037544	GFI1B	52	44.375
ENSAMXG00000043423	-	80	55.128	ENSAMXG00000013492	-	91	52.326
ENSAMXG00000043423	-	76	43.056	ENSAMXG00000034873	-	81	43.056
ENSAMXG00000043423	-	77	69.310	ENSAMXG00000036849	-	89	69.310
ENSAMXG00000043423	-	97	53.202	ENSAMXG00000043178	-	74	53.769
ENSAMXG00000043423	-	81	72.203	ENSAMXG00000003002	-	95	72.203
ENSAMXG00000043423	-	74	75.529	ENSAMXG00000039744	-	99	75.529
ENSAMXG00000043423	-	78	76.371	ENSAMXG00000037703	-	84	76.371
ENSAMXG00000043423	-	76	63.772	ENSAMXG00000029960	-	96	63.772
ENSAMXG00000043423	-	76	67.788	ENSAMXG00000033013	-	81	67.788
ENSAMXG00000043423	-	83	58.808	ENSAMXG00000036241	-	92	62.682
ENSAMXG00000043423	-	86	64.848	ENSAMXG00000037923	-	99	64.848
ENSAMXG00000043423	-	79	62.784	ENSAMXG00000017959	-	98	62.784
ENSAMXG00000043423	-	83	61.745	ENSAMXG00000037143	-	95	61.905
ENSAMXG00000043423	-	87	41.694	ENSAMXG00000014745	-	82	50.311
ENSAMXG00000043423	-	88	71.247	ENSAMXG00000040212	-	98	71.247
ENSAMXG00000043423	-	76	64.048	ENSAMXG00000010805	-	95	64.048
ENSAMXG00000043423	-	88	57.471	ENSAMXG00000033201	-	97	63.174
ENSAMXG00000043423	-	80	44.335	ENSAMXG00000035246	-	76	43.784
ENSAMXG00000043423	-	79	58.239	ENSAMXG00000038536	-	95	58.239
ENSAMXG00000043423	-	74	77.576	ENSAMXG00000039879	-	96	77.576
ENSAMXG00000043423	-	77	42.286	ENSAMXG00000007441	-	65	42.162
ENSAMXG00000043423	-	80	67.372	ENSAMXG00000037760	-	100	67.372
ENSAMXG00000043423	-	83	59.322	ENSAMXG00000026144	-	96	56.818
ENSAMXG00000043423	-	83	75.817	ENSAMXG00000039162	-	99	75.817
ENSAMXG00000043423	-	76	65.940	ENSAMXG00000032619	-	99	68.675
ENSAMXG00000043423	-	77	70.990	ENSAMXG00000041725	-	93	70.990
ENSAMXG00000043423	-	87	73.041	ENSAMXG00000036762	-	98	73.112
ENSAMXG00000043423	-	77	73.636	ENSAMXG00000031900	-	94	73.636
ENSAMXG00000043423	-	86	73.716	ENSAMXG00000036567	-	80	73.716
ENSAMXG00000043423	-	85	74.368	ENSAMXG00000017609	-	85	74.194
ENSAMXG00000043423	-	76	71.500	ENSAMXG00000035683	-	95	71.500
ENSAMXG00000043423	-	84	59.268	ENSAMXG00000040806	-	95	65.455
ENSAMXG00000043423	-	79	56.993	ENSAMXG00000042174	-	91	56.587
ENSAMXG00000043423	-	74	66.341	ENSAMXG00000029161	-	80	66.341
ENSAMXG00000043423	-	76	50.000	ENSAMXG00000037382	-	75	50.000
ENSAMXG00000043423	-	77	63.441	ENSAMXG00000044107	-	89	63.441
ENSAMXG00000043423	-	83	56.364	ENSAMXG00000043541	-	98	59.075
ENSAMXG00000043423	-	74	70.405	ENSAMXG00000031489	-	91	71.304
ENSAMXG00000043423	-	74	59.649	ENSAMXG00000042784	-	94	59.649
ENSAMXG00000043423	-	81	63.787	ENSAMXG00000036633	-	68	59.763
ENSAMXG00000043423	-	79	42.857	ENSAMXG00000006669	GFI1	63	42.857
ENSAMXG00000043423	-	89	39.850	ENSAMXG00000035090	-	60	39.850
ENSAMXG00000043423	-	80	71.237	ENSAMXG00000036233	-	84	71.237
ENSAMXG00000043423	-	79	33.929	ENSAMXG00000035525	znf646	92	33.929
ENSAMXG00000043423	-	87	71.903	ENSAMXG00000041128	-	88	71.903
ENSAMXG00000043423	-	74	70.201	ENSAMXG00000033500	-	93	73.520
ENSAMXG00000043423	-	83	65.333	ENSAMXG00000039700	-	99	65.333
ENSAMXG00000043423	-	74	70.492	ENSAMXG00000040630	-	97	70.040
ENSAMXG00000043423	-	76	67.686	ENSAMXG00000010078	-	86	67.686
ENSAMXG00000043423	-	74	74.061	ENSAMXG00000030911	-	66	73.379
ENSAMXG00000043423	-	82	64.659	ENSAMXG00000037709	-	94	64.659
ENSAMXG00000043423	-	74	57.751	ENSAMXG00000012604	-	96	57.751
ENSAMXG00000043423	-	76	73.568	ENSAMXG00000004610	-	100	73.568
ENSAMXG00000043423	-	76	38.519	ENSAMXG00000038235	snai2	54	38.519
ENSAMXG00000043423	-	74	69.497	ENSAMXG00000039016	-	73	69.497
ENSAMXG00000043423	-	76	41.667	ENSAMXG00000042191	zbtb47a	69	41.667
ENSAMXG00000043423	-	76	72.903	ENSAMXG00000000353	-	98	72.903
ENSAMXG00000043423	-	80	73.050	ENSAMXG00000031794	-	99	70.181
ENSAMXG00000043423	-	82	62.109	ENSAMXG00000012873	-	93	62.109
ENSAMXG00000043423	-	89	31.655	ENSAMXG00000016620	-	81	31.655
ENSAMXG00000043423	-	74	55.696	ENSAMXG00000038122	-	93	55.696
ENSAMXG00000043423	-	91	59.722	ENSAMXG00000033124	-	79	59.722
ENSAMXG00000043423	-	78	51.768	ENSAMXG00000034857	-	65	51.768
ENSAMXG00000043423	-	80	61.265	ENSAMXG00000034344	-	83	61.265
ENSAMXG00000043423	-	81	76.303	ENSAMXG00000035690	-	78	65.097
ENSAMXG00000043423	-	79	69.853	ENSAMXG00000042167	-	97	69.853
ENSAMXG00000043423	-	80	64.730	ENSAMXG00000043291	-	68	64.730
ENSAMXG00000043423	-	93	77.039	ENSAMXG00000029178	-	93	77.039
ENSAMXG00000043423	-	82	36.286	ENSAMXG00000017199	-	52	38.024
ENSAMXG00000043423	-	79	60.623	ENSAMXG00000032237	-	99	60.623
ENSAMXG00000043423	-	76	75.796	ENSAMXG00000025965	-	96	75.796
ENSAMXG00000043423	-	59	51.269	ENSAMXG00000029518	-	79	51.256
ENSAMXG00000043423	-	76	49.133	ENSAMXG00000007973	-	97	49.133
ENSAMXG00000043423	-	91	64.630	ENSAMXG00000031496	-	92	64.630
ENSAMXG00000043423	-	74	75.824	ENSAMXG00000035809	-	99	75.824
ENSAMXG00000043423	-	78	62.564	ENSAMXG00000019489	-	92	62.564
ENSAMXG00000043423	-	86	72.508	ENSAMXG00000041865	-	95	72.508
ENSAMXG00000043423	-	80	43.882	ENSAMXG00000041862	-	99	43.882
ENSAMXG00000043423	-	83	68.908	ENSAMXG00000041861	-	98	68.908
ENSAMXG00000043423	-	78	39.560	ENSAMXG00000041864	prdm5	93	39.560
ENSAMXG00000043423	-	78	54.688	ENSAMXG00000042746	-	95	57.102
ENSAMXG00000043423	-	75	56.842	ENSAMXG00000034333	-	87	56.842
ENSAMXG00000043423	-	86	63.043	ENSAMXG00000039770	-	95	63.043
ENSAMXG00000043423	-	81	59.414	ENSAMXG00000029783	-	97	58.103
ENSAMXG00000043423	-	75	66.120	ENSAMXG00000041650	-	87	66.120
ENSAMXG00000043423	-	79	65.414	ENSAMXG00000037981	-	78	65.414
ENSAMXG00000043423	-	86	66.168	ENSAMXG00000010930	-	88	66.168
ENSAMXG00000043423	-	82	60.490	ENSAMXG00000031844	-	99	60.490
ENSAMXG00000043423	-	89	58.209	ENSAMXG00000034096	-	96	58.209
ENSAMXG00000043423	-	89	71.321	ENSAMXG00000035949	-	86	71.321
ENSAMXG00000043423	-	83	62.703	ENSAMXG00000040677	-	92	63.514
ENSAMXG00000043423	-	79	45.679	ENSAMXG00000034934	-	79	46.207
ENSAMXG00000043423	-	80	65.559	ENSAMXG00000030742	-	99	65.559
ENSAMXG00000043423	-	74	71.530	ENSAMXG00000039182	-	64	71.530
ENSAMXG00000043423	-	83	72.696	ENSAMXG00000041975	-	92	72.696
ENSAMXG00000043423	-	79	65.242	ENSAMXG00000001626	-	96	65.242
ENSAMXG00000043423	-	80	66.113	ENSAMXG00000039408	-	97	66.113
ENSAMXG00000043423	-	80	45.200	ENSAMXG00000033252	-	99	45.200
ENSAMXG00000043423	-	74	76.737	ENSAMXG00000043251	-	95	76.737
ENSAMXG00000043423	-	83	70.956	ENSAMXG00000042938	-	97	70.956
ENSAMXG00000043423	-	82	69.846	ENSAMXG00000034847	-	90	70.091
ENSAMXG00000043423	-	82	75.078	ENSAMXG00000031501	-	85	76.435
ENSAMXG00000043423	-	85	42.657	ENSAMXG00000033405	zbtb14	59	42.424
ENSAMXG00000043423	-	80	70.000	ENSAMXG00000039432	-	99	70.000
ENSAMXG00000043423	-	82	63.372	ENSAMXG00000031307	-	69	63.372
ENSAMXG00000043423	-	85	64.249	ENSAMXG00000043019	-	97	64.249
ENSAMXG00000043423	-	80	60.403	ENSAMXG00000038284	-	99	57.303
ENSAMXG00000043423	-	77	65.957	ENSAMXG00000038280	-	90	65.957
ENSAMXG00000043423	-	76	47.077	ENSAMXG00000012589	-	84	47.077
ENSAMXG00000043423	-	87	74.375	ENSAMXG00000041404	-	93	74.455
ENSAMXG00000043423	-	85	75.229	ENSAMXG00000035920	-	90	75.229
ENSAMXG00000043423	-	74	34.266	ENSAMXG00000002273	patz1	55	31.086
ENSAMXG00000043423	-	74	64.706	ENSAMXG00000043302	-	74	59.912
ENSAMXG00000043423	-	76	65.196	ENSAMXG00000042774	-	100	65.196
ENSAMXG00000043423	-	75	75.375	ENSAMXG00000007092	-	98	75.375
ENSAMXG00000043423	-	89	73.864	ENSAMXG00000041721	-	90	73.864
ENSAMXG00000043423	-	76	74.118	ENSAMXG00000029878	-	98	74.118
ENSAMXG00000043423	-	78	37.008	ENSAMXG00000024907	znf319b	87	37.008
ENSAMXG00000043423	-	76	72.727	ENSAMXG00000035145	-	69	72.727
ENSAMXG00000043423	-	81	63.712	ENSAMXG00000042633	-	98	63.712
ENSAMXG00000043423	-	82	74.449	ENSAMXG00000031646	-	100	74.449
ENSAMXG00000043423	-	74	75.529	ENSAMXG00000037885	-	92	75.529
ENSAMXG00000043423	-	84	76.522	ENSAMXG00000009558	-	97	76.522
ENSAMXG00000043423	-	81	57.851	ENSAMXG00000043978	-	91	57.851
ENSAMXG00000043423	-	81	54.870	ENSAMXG00000030659	-	87	54.870
ENSAMXG00000043423	-	76	63.226	ENSAMXG00000034402	-	94	63.226
ENSAMXG00000043423	-	74	64.881	ENSAMXG00000030963	-	79	64.881
ENSAMXG00000043423	-	80	62.538	ENSAMXG00000036915	-	94	62.538
ENSAMXG00000043423	-	80	64.333	ENSAMXG00000042593	-	100	64.333
ENSAMXG00000043423	-	67	37.383	ENSAMXG00000029059	-	64	37.383
ENSAMXG00000043423	-	74	73.716	ENSAMXG00000032457	-	91	73.716
ENSAMXG00000043423	-	80	67.372	ENSAMXG00000035437	-	100	67.372
ENSAMXG00000043423	-	76	53.521	ENSAMXG00000035286	si:ch1073-224n8.1	83	47.917
ENSAMXG00000043423	-	79	67.081	ENSAMXG00000032212	-	92	67.081
ENSAMXG00000043423	-	88	64.970	ENSAMXG00000044110	-	97	64.970
ENSAMXG00000043423	-	86	66.986	ENSAMXG00000044028	-	98	66.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043423	-	75	57.216	ENSAOCG00000013672	-	94	57.216	Amphiprion_ocellaris
ENSAMXG00000043423	-	83	52.033	ENSACLG00000008821	-	99	52.033	Astatotilapia_calliptera
ENSAMXG00000043423	-	78	56.250	ENSTSYG00000006246	-	74	56.250	Carlito_syrichta
ENSAMXG00000043423	-	78	50.725	ENSCGRG00001019143	-	82	50.725	Cricetulus_griseus_chok1gshd
ENSAMXG00000043423	-	98	53.182	ENSCGRG00001012803	-	79	53.182	Cricetulus_griseus_chok1gshd
ENSAMXG00000043423	-	77	52.090	ENSCGRG00001024303	-	97	50.633	Cricetulus_griseus_chok1gshd
ENSAMXG00000043423	-	79	54.114	ENSCGRG00000008531	-	90	54.114	Cricetulus_griseus_crigri
ENSAMXG00000043423	-	98	53.182	ENSCGRG00000009742	-	79	53.182	Cricetulus_griseus_crigri
ENSAMXG00000043423	-	78	46.597	ENSEBUG00000003236	-	95	44.660	Eptatretus_burgeri
ENSAMXG00000043423	-	73	54.909	ENSEBUG00000003590	-	72	51.692	Eptatretus_burgeri
ENSAMXG00000043423	-	75	51.084	ENSEBUG00000007375	-	83	51.084	Eptatretus_burgeri
ENSAMXG00000043423	-	81	46.032	ENSEBUG00000015834	-	99	46.032	Eptatretus_burgeri
ENSAMXG00000043423	-	81	56.000	ENSEBUG00000017017	-	70	56.000	Eptatretus_burgeri
ENSAMXG00000043423	-	76	53.231	ENSEBUG00000001121	-	80	53.231	Eptatretus_burgeri
ENSAMXG00000043423	-	74	46.667	ENSEBUG00000015993	-	66	45.042	Eptatretus_burgeri
ENSAMXG00000043423	-	76	54.601	ENSIPUG00000013315	-	93	54.601	Ictalurus_punctatus
ENSAMXG00000043423	-	76	51.466	ENSMAUG00000016437	-	99	51.466	Mesocricetus_auratus
ENSAMXG00000043423	-	78	49.603	ENSMAUG00000005691	-	75	49.603	Mesocricetus_auratus
ENSAMXG00000043423	-	78	52.475	ENSMOCG00000000365	-	81	52.475	Microtus_ochrogaster
ENSAMXG00000043423	-	78	50.739	MGP_CAROLIEiJ_G0018660	-	66	50.739	Mus_caroli
ENSAMXG00000043423	-	78	57.190	MGP_CAROLIEiJ_G0018683	Zfp493	84	57.190	Mus_caroli
ENSAMXG00000043423	-	74	60.645	ENSMUSG00000091474	2610021A01Rik	64	60.645	Mus_musculus
ENSAMXG00000043423	-	78	51.961	ENSMUSG00000074824	Rslcan18	70	53.153	Mus_musculus
ENSAMXG00000043423	-	74	60.790	MGP_PahariEiJ_G0012839	-	65	60.790	Mus_pahari
ENSAMXG00000043423	-	78	51.232	MGP_SPRETEiJ_G0019543	-	68	51.232	Mus_spretus
ENSAMXG00000043423	-	74	43.694	ENSPMAG00000000404	-	99	44.843	Petromyzon_marinus
ENSAMXG00000043423	-	80	71.062	ENSPNAG00000014492	-	99	71.062	Pygocentrus_nattereri
ENSAMXG00000043423	-	85	67.628	ENSPNAG00000003017	-	99	67.628	Pygocentrus_nattereri
ENSAMXG00000043423	-	81	58.416	ENSSSCG00000040389	-	85	58.416	Sus_scrofa
ENSAMXG00000043423	-	81	45.860	ENSTRUG00000014476	-	90	45.860	Takifugu_rubripes