EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000043469 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 1424 bases
Position: chr20:13749121-13750544
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050381	RVT_1	PF00078.27	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045439	-	1424	-	ENSAMXP00000050381	460 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000043469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000043469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000043469	-	60	44.364	ENSAMXG00000031032	-	73	44.364
ENSAMXG00000043469	-	77	34.704	ENSAMXG00000043821	-	51	34.704
ENSAMXG00000043469	-	77	36.517	ENSAMXG00000039106	-	69	37.079
ENSAMXG00000043469	-	95	32.716	ENSAMXG00000041114	-	52	32.716
ENSAMXG00000043469	-	95	30.859	ENSAMXG00000041896	-	72	30.859
ENSAMXG00000043469	-	62	39.373	ENSAMXG00000029182	-	72	39.373
ENSAMXG00000043469	-	80	38.830	ENSAMXG00000038502	-	76	38.830
ENSAMXG00000043469	-	95	30.913	ENSAMXG00000033197	-	66	31.328
ENSAMXG00000043469	-	98	34.783	ENSAMXG00000033786	-	66	33.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000043469	-	70	39.062	ENSAPOG00000008925	-	88	39.062	Acanthochromis_polyacanthus
ENSAMXG00000043469	-	79	35.641	ENSAPEG00000006765	-	59	35.641	Amphiprion_percula
ENSAMXG00000043469	-	92	33.411	ENSAPEG00000014949	-	61	33.411	Amphiprion_percula
ENSAMXG00000043469	-	98	32.673	ENSAPEG00000002572	-	52	32.673	Amphiprion_percula
ENSAMXG00000043469	-	86	36.881	ENSAPEG00000005752	-	95	36.881	Amphiprion_percula
ENSAMXG00000043469	-	70	42.991	ENSACLG00000001380	-	55	42.991	Astatotilapia_calliptera
ENSAMXG00000043469	-	95	35.256	ENSACLG00000014740	-	55	35.256	Astatotilapia_calliptera
ENSAMXG00000043469	-	95	38.170	ENSACLG00000009861	-	90	38.170	Astatotilapia_calliptera
ENSAMXG00000043469	-	56	35.907	ENSACLG00000013289	-	77	35.907	Astatotilapia_calliptera
ENSAMXG00000043469	-	70	39.385	ENSACLG00000020385	-	55	39.385	Astatotilapia_calliptera
ENSAMXG00000043469	-	65	34.835	ENSACLG00000021355	-	57	34.835	Astatotilapia_calliptera
ENSAMXG00000043469	-	60	38.267	ENSACLG00000013847	-	63	38.267	Astatotilapia_calliptera
ENSAMXG00000043469	-	67	84.091	ENSACLG00000010403	-	100	84.091	Astatotilapia_calliptera
ENSAMXG00000043469	-	65	39.000	ENSACLG00000021935	-	91	39.000	Astatotilapia_calliptera
ENSAMXG00000043469	-	64	37.072	ENSACLG00000006798	-	100	37.695	Astatotilapia_calliptera
ENSAMXG00000043469	-	91	34.735	ENSACLG00000024556	-	54	34.735	Astatotilapia_calliptera
ENSAMXG00000043469	-	65	36.877	ENSACLG00000006549	-	82	36.877	Astatotilapia_calliptera
ENSAMXG00000043469	-	60	37.770	ENSCPBG00000001687	-	91	37.770	Chrysemys_picta_bellii
ENSAMXG00000043469	-	87	37.624	ENSCPBG00000001119	-	88	37.624	Chrysemys_picta_bellii
ENSAMXG00000043469	-	71	32.927	ENSCPBG00000001369	-	58	32.927	Chrysemys_picta_bellii
ENSAMXG00000043469	-	100	30.277	ENSCING00000021231	-	54	30.405	Ciona_intestinalis
ENSAMXG00000043469	-	100	53.796	ENSCVAG00000019870	-	62	53.796	Cyprinodon_variegatus
ENSAMXG00000043469	-	59	38.889	ENSCVAG00000001415	-	71	38.889	Cyprinodon_variegatus
ENSAMXG00000043469	-	70	30.435	ENSEBUG00000001810	-	84	30.435	Eptatretus_burgeri
ENSAMXG00000043469	-	51	35.632	ENSGAFG00000008149	-	92	35.632	Gambusia_affinis
ENSAMXG00000043469	-	97	61.435	ENSGAGG00000007173	-	70	61.435	Gopherus_agassizii
ENSAMXG00000043469	-	71	33.030	ENSGAGG00000013650	-	58	33.030	Gopherus_agassizii
ENSAMXG00000043469	-	60	38.489	ENSGAGG00000022131	-	91	38.489	Gopherus_agassizii
ENSAMXG00000043469	-	53	37.603	ENSGAGG00000022000	-	86	37.603	Gopherus_agassizii
ENSAMXG00000043469	-	100	61.739	ENSGAGG00000022002	-	55	61.739	Gopherus_agassizii
ENSAMXG00000043469	-	55	66.535	ENSGAGG00000011063	-	52	66.535	Gopherus_agassizii
ENSAMXG00000043469	-	95	33.034	ENSHBUG00000016445	-	77	33.034	Haplochromis_burtoni
ENSAMXG00000043469	-	66	39.216	ENSHBUG00000009088	-	83	39.216	Haplochromis_burtoni
ENSAMXG00000043469	-	62	53.659	ENSHCOG00000019997	-	52	53.659	Hippocampus_comes
ENSAMXG00000043469	-	80	53.887	ENSIPUG00000003645	-	77	53.887	Ictalurus_punctatus
ENSAMXG00000043469	-	98	37.856	ENSKMAG00000013568	-	58	37.856	Kryptolebias_marmoratus
ENSAMXG00000043469	-	98	37.856	ENSKMAG00000007574	-	90	37.856	Kryptolebias_marmoratus
ENSAMXG00000043469	-	60	37.417	ENSKMAG00000010799	-	83	37.417	Kryptolebias_marmoratus
ENSAMXG00000043469	-	70	39.815	ENSLBEG00000003912	-	83	39.815	Labrus_bergylta
ENSAMXG00000043469	-	100	30.819	ENSLACG00000016441	-	59	30.819	Latimeria_chalumnae
ENSAMXG00000043469	-	58	47.170	ENSLACG00000002249	-	99	47.170	Latimeria_chalumnae
ENSAMXG00000043469	-	68	30.061	ENSLACG00000005007	-	50	30.061	Latimeria_chalumnae
ENSAMXG00000043469	-	99	30.833	ENSLACG00000003991	-	52	30.833	Latimeria_chalumnae
ENSAMXG00000043469	-	63	31.633	ENSLACG00000015201	-	50	31.633	Latimeria_chalumnae
ENSAMXG00000043469	-	70	52.025	ENSLACG00000001892	-	93	52.025	Latimeria_chalumnae
ENSAMXG00000043469	-	92	44.167	ENSLACG00000010776	-	65	53.333	Latimeria_chalumnae
ENSAMXG00000043469	-	98	44.493	ENSLACG00000009168	-	67	40.308	Latimeria_chalumnae
ENSAMXG00000043469	-	97	30.283	ENSLACG00000007830	-	57	30.283	Latimeria_chalumnae
ENSAMXG00000043469	-	68	32.188	ENSLACG00000003900	-	99	32.188	Latimeria_chalumnae
ENSAMXG00000043469	-	98	38.000	ENSLACG00000001186	-	55	38.000	Latimeria_chalumnae
ENSAMXG00000043469	-	53	34.959	ENSLOCG00000017292	-	76	34.959	Lepisosteus_oculatus
ENSAMXG00000043469	-	95	33.763	ENSMAMG00000021634	-	68	33.763	Mastacembelus_armatus
ENSAMXG00000043469	-	91	32.385	ENSMAMG00000004646	-	96	32.385	Mastacembelus_armatus
ENSAMXG00000043469	-	95	48.276	ENSMAMG00000019918	-	71	48.276	Mastacembelus_armatus
ENSAMXG00000043469	-	70	39.943	ENSMAMG00000016004	-	80	32.096	Mastacembelus_armatus
ENSAMXG00000043469	-	100	30.000	ENSMZEG00005024252	-	55	30.000	Maylandia_zebra
ENSAMXG00000043469	-	92	35.903	ENSMZEG00005008378	-	61	35.903	Maylandia_zebra
ENSAMXG00000043469	-	70	36.571	ENSMZEG00005017878	-	53	36.571	Maylandia_zebra
ENSAMXG00000043469	-	95	38.393	ENSMZEG00005023829	-	89	38.393	Maylandia_zebra
ENSAMXG00000043469	-	59	39.493	ENSMALG00000020245	-	98	39.493	Monopterus_albus
ENSAMXG00000043469	-	62	54.355	ENSMALG00000005075	-	90	54.355	Monopterus_albus
ENSAMXG00000043469	-	69	41.066	ENSNBRG00000002477	-	94	41.066	Neolamprologus_brichardi
ENSAMXG00000043469	-	66	86.557	ENSNBRG00000002791	-	100	86.557	Neolamprologus_brichardi
ENSAMXG00000043469	-	57	34.783	ENSONIG00000018991	-	96	34.783	Oreochromis_niloticus
ENSAMXG00000043469	-	60	38.869	ENSORLG00000023794	-	52	38.869	Oryzias_latipes
ENSAMXG00000043469	-	67	37.821	ENSORLG00000022411	-	85	37.821	Oryzias_latipes
ENSAMXG00000043469	-	99	30.799	ENSORLG00000025397	-	50	30.799	Oryzias_latipes
ENSAMXG00000043469	-	80	38.462	ENSORLG00000027231	-	71	38.462	Oryzias_latipes
ENSAMXG00000043469	-	68	36.218	ENSORLG00000027869	-	68	36.218	Oryzias_latipes
ENSAMXG00000043469	-	71	37.069	ENSORLG00000022742	-	93	37.069	Oryzias_latipes
ENSAMXG00000043469	-	77	36.769	ENSORLG00020009127	-	69	36.769	Oryzias_latipes_hni
ENSAMXG00000043469	-	56	42.146	ENSORLG00020000154	-	64	42.146	Oryzias_latipes_hni
ENSAMXG00000043469	-	69	44.201	ENSORLG00020016924	-	75	44.201	Oryzias_latipes_hni
ENSAMXG00000043469	-	99	40.351	ENSORLG00020009084	-	62	40.351	Oryzias_latipes_hni
ENSAMXG00000043469	-	69	40.062	ENSORLG00020012706	-	80	40.062	Oryzias_latipes_hni
ENSAMXG00000043469	-	96	34.504	ENSORLG00020016695	-	64	34.504	Oryzias_latipes_hni
ENSAMXG00000043469	-	88	30.754	ENSORLG00020018561	-	50	30.754	Oryzias_latipes_hni
ENSAMXG00000043469	-	99	37.393	ENSORLG00020002002	-	73	37.393	Oryzias_latipes_hni
ENSAMXG00000043469	-	62	39.161	ENSORLG00020002705	-	89	39.161	Oryzias_latipes_hni
ENSAMXG00000043469	-	99	37.931	ENSORLG00020019030	-	56	37.931	Oryzias_latipes_hni
ENSAMXG00000043469	-	63	40.816	ENSORLG00020021288	-	90	40.816	Oryzias_latipes_hni
ENSAMXG00000043469	-	71	37.069	ENSORLG00020004454	-	87	37.069	Oryzias_latipes_hni
ENSAMXG00000043469	-	98	36.501	ENSORLG00020000592	-	54	36.501	Oryzias_latipes_hni
ENSAMXG00000043469	-	69	38.608	ENSORLG00015008138	-	60	38.608	Oryzias_latipes_hsok
ENSAMXG00000043469	-	96	37.528	ENSORLG00015010510	-	72	37.528	Oryzias_latipes_hsok
ENSAMXG00000043469	-	99	33.121	ENSORLG00015022127	-	59	33.121	Oryzias_latipes_hsok
ENSAMXG00000043469	-	97	33.333	ENSORLG00015008388	-	50	33.333	Oryzias_latipes_hsok
ENSAMXG00000043469	-	57	38.697	ENSORLG00015009803	-	55	38.697	Oryzias_latipes_hsok
ENSAMXG00000043469	-	97	31.884	ENSORLG00015013109	-	78	31.884	Oryzias_latipes_hsok
ENSAMXG00000043469	-	58	42.910	ENSORLG00015021822	-	72	42.857	Oryzias_latipes_hsok
ENSAMXG00000043469	-	100	61.522	ENSOMEG00000005634	-	62	61.522	Oryzias_melastigma
ENSAMXG00000043469	-	70	36.137	ENSOMEG00000013073	-	51	36.137	Oryzias_melastigma
ENSAMXG00000043469	-	97	33.126	ENSOMEG00000013479	-	78	33.126	Oryzias_melastigma
ENSAMXG00000043469	-	99	31.717	ENSOMEG00000012600	-	58	31.717	Oryzias_melastigma
ENSAMXG00000043469	-	63	34.828	ENSOMEG00000007764	-	97	34.828	Oryzias_melastigma
ENSAMXG00000043469	-	74	40.525	ENSPKIG00000007140	-	77	40.462	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	65	36.646	ENSPKIG00000004057	-	71	36.646	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	99	31.273	ENSPKIG00000007924	-	55	31.273	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	94	30.385	ENSPKIG00000003982	-	99	30.385	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	99	45.415	ENSPKIG00000013778	-	56	45.415	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	80	44.414	ENSPKIG00000005406	-	61	44.414	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	95	30.266	ENSPKIG00000006120	-	53	30.266	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	54	60.241	ENSPKIG00000019619	-	89	60.241	Paramormyrops_kingsleyae
ENSAMXG00000043469	-	70	31.402	ENSPSIG00000001136	-	66	31.402	Pelodiscus_sinensis
ENSAMXG00000043469	-	57	38.783	ENSPSIG00000000367	-	60	38.783	Pelodiscus_sinensis
ENSAMXG00000043469	-	69	37.888	ENSPSIG00000001197	-	78	37.888	Pelodiscus_sinensis
ENSAMXG00000043469	-	69	39.752	ENSPSIG00000001205	-	68	39.752	Pelodiscus_sinensis
ENSAMXG00000043469	-	71	64.615	ENSPSIG00000002033	-	99	64.615	Pelodiscus_sinensis
ENSAMXG00000043469	-	68	37.460	ENSPSIG00000001249	-	90	37.460	Pelodiscus_sinensis
ENSAMXG00000043469	-	68	38.994	ENSPSIG00000001757	-	77	38.994	Pelodiscus_sinensis
ENSAMXG00000043469	-	64	34.122	ENSPSIG00000014032	-	86	34.122	Pelodiscus_sinensis
ENSAMXG00000043469	-	55	38.224	ENSPSIG00000001816	-	95	38.224	Pelodiscus_sinensis
ENSAMXG00000043469	-	70	37.003	ENSPSIG00000000193	-	64	37.003	Pelodiscus_sinensis
ENSAMXG00000043469	-	57	36.226	ENSPSIG00000001800	-	59	36.226	Pelodiscus_sinensis
ENSAMXG00000043469	-	69	37.048	ENSPSIG00000000226	-	63	37.389	Pelodiscus_sinensis
ENSAMXG00000043469	-	92	53.081	ENSPMEG00000019465	-	94	53.081	Poecilia_mexicana
ENSAMXG00000043469	-	67	41.587	ENSPMEG00000018862	-	62	41.587	Poecilia_mexicana
ENSAMXG00000043469	-	54	40.161	ENSPREG00000022349	-	53	40.161	Poecilia_reticulata
ENSAMXG00000043469	-	99	32.193	ENSPREG00000006122	-	65	32.193	Poecilia_reticulata
ENSAMXG00000043469	-	95	32.919	ENSPREG00000006650	-	87	32.919	Poecilia_reticulata
ENSAMXG00000043469	-	65	40.264	ENSPREG00000005117	-	64	40.264	Poecilia_reticulata
ENSAMXG00000043469	-	99	33.200	ENSPREG00000006496	-	68	33.200	Poecilia_reticulata
ENSAMXG00000043469	-	59	41.971	ENSPNAG00000015949	-	71	41.971	Pygocentrus_nattereri
ENSAMXG00000043469	-	81	46.361	ENSPNAG00000010299	-	73	46.361	Pygocentrus_nattereri
ENSAMXG00000043469	-	99	31.238	ENSPNAG00000021509	-	51	31.238	Pygocentrus_nattereri
ENSAMXG00000043469	-	96	54.484	ENSPNAG00000009058	-	89	54.484	Pygocentrus_nattereri
ENSAMXG00000043469	-	75	34.197	ENSSFOG00015024061	-	62	34.197	Scleropages_formosus
ENSAMXG00000043469	-	65	37.874	ENSSFOG00015015399	-	85	37.874	Scleropages_formosus
ENSAMXG00000043469	-	92	51.659	ENSSFOG00015016168	-	96	51.659	Scleropages_formosus
ENSAMXG00000043469	-	58	52.075	ENSTRUG00000024803	-	51	52.075	Takifugu_rubripes
ENSAMXG00000043469	-	95	30.612	ENSTRUG00000021236	-	63	30.612	Takifugu_rubripes
ENSAMXG00000043469	-	54	37.154	ENSTRUG00000024970	-	83	37.154	Takifugu_rubripes
ENSAMXG00000043469	-	99	30.150	ENSXMAG00000024180	-	52	30.150	Xiphophorus_maculatus
ENSAMXG00000043469	-	60	37.417	ENSXMAG00000027711	-	89	37.417	Xiphophorus_maculatus
ENSAMXG00000043469	-	99	39.570	ENSXMAG00000023507	-	89	39.570	Xiphophorus_maculatus
ENSAMXG00000043469	-	99	36.481	ENSXMAG00000025957	-	81	36.481	Xiphophorus_maculatus